Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D28:D27
Extra
PDB:
ATOM 1 O3' A A 27 -13.433 9.822 24.130 1.00 52.44 O
ATOM 2 P G A 28 -12.176 10.116 25.086 1.00 52.89 P
ATOM 3 OP1 G A 28 -12.501 9.631 26.459 1.00 53.75 O
ATOM 4 OP2 G A 28 -11.816 11.542 24.879 1.00 54.08 O
ATOM 5 O5' G A 28 -11.006 9.191 24.513 1.00 51.59 O
ATOM 6 C5' G A 28 -10.211 9.604 23.403 1.00 48.64 C
ATOM 7 C4' G A 28 -8.829 10.005 23.869 1.00 46.49 C
ATOM 8 O4' G A 28 -8.183 8.881 24.516 1.00 47.21 O
ATOM 9 C3' G A 28 -7.849 10.396 22.778 1.00 45.53 C
ATOM 10 O3' G A 28 -8.033 11.757 22.420 1.00 44.70 O
ATOM 11 C2' G A 28 -6.508 10.212 23.472 1.00 45.97 C
ATOM 12 O2' G A 28 -6.198 11.325 24.279 1.00 46.91 O
ATOM 13 C1' G A 28 -6.777 8.994 24.360 1.00 47.02 C
ATOM 14 N9 G A 28 -6.258 7.737 23.826 1.00 47.74 N
ATOM 15 C8 G A 28 -6.975 6.609 23.497 1.00 48.52 C
ATOM 16 N7 G A 28 -6.227 5.638 23.041 1.00 48.35 N
ATOM 17 C5 G A 28 -4.938 6.154 23.067 1.00 47.69 C
ATOM 18 C6 G A 28 -3.706 5.567 22.678 1.00 45.68 C
ATOM 19 O6 G A 28 -3.502 4.435 22.217 1.00 43.98 O
ATOM 20 N1 G A 28 -2.641 6.444 22.868 1.00 45.57 N
ATOM 21 C2 G A 28 -2.746 7.725 23.367 1.00 47.15 C
ATOM 22 N2 G A 28 -1.605 8.427 23.481 1.00 43.26 N
ATOM 23 N3 G A 28 -3.891 8.283 23.729 1.00 48.67 N
ATOM 24 C4 G A 28 -4.938 7.448 23.553 1.00 48.61 C
ATOM 25 P U A 29 -7.939 12.196 20.877 1.00 46.23 P
ATOM 26 OP1 U A 29 -8.554 13.539 20.724 1.00 46.05 O
ATOM 27 OP2 U A 29 -8.419 11.064 20.040 1.00 45.41 O
ATOM 28 O5' U A 29 -6.376 12.352 20.615 1.00 48.05 O
TER
ATOM 1 O3' A B 26 -11.819 4.855 21.230 1.00 50.33 O
ATOM 2 P A B 27 -11.128 5.789 22.343 1.00 52.15 P
ATOM 3 OP1 A B 27 -10.180 6.697 21.656 1.00 53.31 O
ATOM 4 OP2 A B 27 -10.645 4.929 23.463 1.00 50.67 O
ATOM 5 O5' A B 27 -12.338 6.672 22.874 1.00 52.56 O
ATOM 6 C5' A B 27 -13.072 7.513 21.990 1.00 52.65 C
ATOM 7 C4' A B 27 -14.284 8.060 22.698 1.00 52.23 C
ATOM 8 O4' A B 27 -15.263 7.003 22.875 1.00 52.15 O
ATOM 9 C3' A B 27 -14.006 8.527 24.114 1.00 52.20 C
ATOM 10 O3' A B 27 -13.433 9.822 24.130 1.00 52.44 O
ATOM 11 C2' A B 27 -15.387 8.451 24.751 1.00 52.07 C
ATOM 12 O2' A B 27 -16.234 9.526 24.390 1.00 51.65 O
ATOM 13 C1' A B 27 -15.913 7.157 24.130 1.00 51.49 C
ATOM 14 N9 A B 27 -15.629 5.969 24.936 1.00 50.30 N
ATOM 15 C8 A B 27 -14.518 5.158 24.896 1.00 49.35 C
ATOM 16 N7 A B 27 -14.568 4.151 25.731 1.00 48.99 N
ATOM 17 C5 A B 27 -15.791 4.309 26.367 1.00 49.32 C
ATOM 18 C6 A B 27 -16.442 3.560 27.360 1.00 49.76 C
ATOM 19 N6 A B 27 -15.932 2.451 27.903 1.00 50.18 N
ATOM 20 N1 A B 27 -17.651 3.990 27.780 1.00 50.52 N
ATOM 21 C2 A B 27 -18.165 5.101 27.225 1.00 50.96 C
ATOM 22 N3 A B 27 -17.653 5.886 26.281 1.00 49.68 N
ATOM 23 C4 A B 27 -16.450 5.429 25.892 1.00 49.70 C
ATOM 24 P G B 28 -12.176 10.116 25.086 1.00 52.89 P
ATOM 25 OP1 G B 28 -12.501 9.631 26.459 1.00 53.75 O
ATOM 26 OP2 G B 28 -11.816 11.542 24.879 1.00 54.08 O
ATOM 27 O5' G B 28 -11.006 9.191 24.513 1.00 51.59 O
TER
ATOM 2 P G A 28 -12.176 10.116 25.086 1.00 52.89 P
ATOM 3 OP1 G A 28 -12.501 9.631 26.459 1.00 53.75 O
ATOM 4 OP2 G A 28 -11.816 11.542 24.879 1.00 54.08 O
ATOM 5 O5' G A 28 -11.006 9.191 24.513 1.00 51.59 O
ATOM 6 C5' G A 28 -10.211 9.604 23.403 1.00 48.64 C
ATOM 7 C4' G A 28 -8.829 10.005 23.869 1.00 46.49 C
ATOM 8 O4' G A 28 -8.183 8.881 24.516 1.00 47.21 O
ATOM 9 C3' G A 28 -7.849 10.396 22.778 1.00 45.53 C
ATOM 10 O3' G A 28 -8.033 11.757 22.420 1.00 44.70 O
ATOM 11 C2' G A 28 -6.508 10.212 23.472 1.00 45.97 C
ATOM 12 O2' G A 28 -6.198 11.325 24.279 1.00 46.91 O
ATOM 13 C1' G A 28 -6.777 8.994 24.360 1.00 47.02 C
ATOM 14 N9 G A 28 -6.258 7.737 23.826 1.00 47.74 N
ATOM 15 C8 G A 28 -6.975 6.609 23.497 1.00 48.52 C
ATOM 16 N7 G A 28 -6.227 5.638 23.041 1.00 48.35 N
ATOM 17 C5 G A 28 -4.938 6.154 23.067 1.00 47.69 C
ATOM 18 C6 G A 28 -3.706 5.567 22.678 1.00 45.68 C
ATOM 19 O6 G A 28 -3.502 4.435 22.217 1.00 43.98 O
ATOM 20 N1 G A 28 -2.641 6.444 22.868 1.00 45.57 N
ATOM 21 C2 G A 28 -2.746 7.725 23.367 1.00 47.15 C
ATOM 22 N2 G A 28 -1.605 8.427 23.481 1.00 43.26 N
ATOM 23 N3 G A 28 -3.891 8.283 23.729 1.00 48.67 N
ATOM 24 C4 G A 28 -4.938 7.448 23.553 1.00 48.61 C
ATOM 25 P U A 29 -7.939 12.196 20.877 1.00 46.23 P
ATOM 26 OP1 U A 29 -8.554 13.539 20.724 1.00 46.05 O
ATOM 27 OP2 U A 29 -8.419 11.064 20.040 1.00 45.41 O
ATOM 28 O5' U A 29 -6.376 12.352 20.615 1.00 48.05 O
TER
ATOM 1 O3' A B 26 -11.819 4.855 21.230 1.00 50.33 O
ATOM 2 P A B 27 -11.128 5.789 22.343 1.00 52.15 P
ATOM 3 OP1 A B 27 -10.180 6.697 21.656 1.00 53.31 O
ATOM 4 OP2 A B 27 -10.645 4.929 23.463 1.00 50.67 O
ATOM 5 O5' A B 27 -12.338 6.672 22.874 1.00 52.56 O
ATOM 6 C5' A B 27 -13.072 7.513 21.990 1.00 52.65 C
ATOM 7 C4' A B 27 -14.284 8.060 22.698 1.00 52.23 C
ATOM 8 O4' A B 27 -15.263 7.003 22.875 1.00 52.15 O
ATOM 9 C3' A B 27 -14.006 8.527 24.114 1.00 52.20 C
ATOM 10 O3' A B 27 -13.433 9.822 24.130 1.00 52.44 O
ATOM 11 C2' A B 27 -15.387 8.451 24.751 1.00 52.07 C
ATOM 12 O2' A B 27 -16.234 9.526 24.390 1.00 51.65 O
ATOM 13 C1' A B 27 -15.913 7.157 24.130 1.00 51.49 C
ATOM 14 N9 A B 27 -15.629 5.969 24.936 1.00 50.30 N
ATOM 15 C8 A B 27 -14.518 5.158 24.896 1.00 49.35 C
ATOM 16 N7 A B 27 -14.568 4.151 25.731 1.00 48.99 N
ATOM 17 C5 A B 27 -15.791 4.309 26.367 1.00 49.32 C
ATOM 18 C6 A B 27 -16.442 3.560 27.360 1.00 49.76 C
ATOM 19 N6 A B 27 -15.932 2.451 27.903 1.00 50.18 N
ATOM 20 N1 A B 27 -17.651 3.990 27.780 1.00 50.52 N
ATOM 21 C2 A B 27 -18.165 5.101 27.225 1.00 50.96 C
ATOM 22 N3 A B 27 -17.653 5.886 26.281 1.00 49.68 N
ATOM 23 C4 A B 27 -16.450 5.429 25.892 1.00 49.70 C
ATOM 24 P G B 28 -12.176 10.116 25.086 1.00 52.89 P
ATOM 25 OP1 G B 28 -12.501 9.631 26.459 1.00 53.75 O
ATOM 26 OP2 G B 28 -11.816 11.542 24.879 1.00 54.08 O
ATOM 27 O5' G B 28 -11.006 9.191 24.513 1.00 51.59 O
TER
Atoms:
OP1: (-12.501,9.631,26.459)
OP2: (-11.816,11.542,24.879)
C3': (-7.849,10.396,22.778)
C1': (-6.777,8.994,24.360)
C5': (-10.211,9.604,23.403)
O6: (-3.502,4.435,22.217)
O4': (-8.183,8.881,24.516)
C8: (-6.975,6.609,23.497)
C2: (-2.746,7.725,23.367)
C6: (-3.706,5.567,22.678)
C5: (-4.938,6.154,23.067)
C4: (-4.938,7.448,23.553)
P: (-12.176,10.116,25.086)
C4': (-8.829,10.005,23.869)
C2': (-6.508,10.212,23.472)
O2': (-6.198,11.325,24.279)
N1: (-2.641,6.444,22.868)
N2: (-1.605,8.427,23.481)
N3: (-3.891,8.283,23.729)
N7: (-6.227,5.638,23.041)
N9: (-6.258,7.737,23.826)
O5': (-11.006,9.191,24.513)
O3': (-8.033,11.757,22.420)
OP2: (-11.816,11.542,24.879)
C3': (-7.849,10.396,22.778)
C1': (-6.777,8.994,24.360)
C5': (-10.211,9.604,23.403)
O6: (-3.502,4.435,22.217)
O4': (-8.183,8.881,24.516)
C8: (-6.975,6.609,23.497)
C2: (-2.746,7.725,23.367)
C6: (-3.706,5.567,22.678)
C5: (-4.938,6.154,23.067)
C4: (-4.938,7.448,23.553)
P: (-12.176,10.116,25.086)
C4': (-8.829,10.005,23.869)
C2': (-6.508,10.212,23.472)
O2': (-6.198,11.325,24.279)
N1: (-2.641,6.444,22.868)
N2: (-1.605,8.427,23.481)
N3: (-3.891,8.283,23.729)
N7: (-6.227,5.638,23.041)
N9: (-6.258,7.737,23.826)
O5': (-11.006,9.191,24.513)
O3': (-8.033,11.757,22.420)
OP1: (-10.180,6.697,21.656)
OP2: (-10.645,4.929,23.463)
C3': (-14.006,8.527,24.114)
C1': (-15.913,7.157,24.130)
C5': (-13.072,7.513,21.990)
O4': (-15.263,7.003,22.875)
C8: (-14.518,5.158,24.896)
O2': (-16.234,9.526,24.390)
C6: (-16.442,3.560,27.360)
C5: (-15.791,4.309,26.367)
C4: (-16.450,5.429,25.892)
P: (-11.128,5.789,22.343)
C4': (-14.284,8.060,22.698)
C2': (-15.387,8.451,24.751)
C2: (-18.165,5.101,27.225)
N1: (-17.651,3.990,27.780)
N3: (-17.653,5.886,26.281)
N6: (-15.932,2.451,27.903)
N7: (-14.568,4.151,25.731)
N9: (-15.629,5.969,24.936)
O5': (-12.338,6.672,22.874)
O3': (-13.433,9.822,24.130)
OP2: (-10.645,4.929,23.463)
C3': (-14.006,8.527,24.114)
C1': (-15.913,7.157,24.130)
C5': (-13.072,7.513,21.990)
O4': (-15.263,7.003,22.875)
C8: (-14.518,5.158,24.896)
O2': (-16.234,9.526,24.390)
C6: (-16.442,3.560,27.360)
C5: (-15.791,4.309,26.367)
C4: (-16.450,5.429,25.892)
P: (-11.128,5.789,22.343)
C4': (-14.284,8.060,22.698)
C2': (-15.387,8.451,24.751)
C2: (-18.165,5.101,27.225)
N1: (-17.651,3.990,27.780)
N3: (-17.653,5.886,26.281)
N6: (-15.932,2.451,27.903)
N7: (-14.568,4.151,25.731)
N9: (-15.629,5.969,24.936)
O5': (-12.338,6.672,22.874)
O3': (-13.433,9.822,24.130)
Image (generated by PyMOL):