Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:084:087
Extra
PDB:
ATOM 1 O3' C A 83 40.417 168.324 23.149 1.00 52.85 O
ATOM 2 P G A 84 39.419 168.592 21.917 1.00 52.88 P
ATOM 3 OP1 G A 84 40.209 168.487 20.663 1.00 52.53 O
ATOM 4 OP2 G A 84 38.621 169.816 22.191 1.00 53.21 O
ATOM 5 O5' G A 84 38.422 167.357 21.965 1.00 53.45 O
ATOM 6 C5' G A 84 38.882 166.035 21.655 1.00 52.45 C
ATOM 7 C4' G A 84 37.720 165.084 21.627 1.00 51.57 C
ATOM 8 O4' G A 84 37.146 164.988 22.955 1.00 50.71 O
ATOM 9 C3' G A 84 36.539 165.535 20.790 1.00 52.88 C
ATOM 10 O3' G A 84 36.758 165.338 19.399 1.00 58.13 O
ATOM 11 C2' G A 84 35.424 164.673 21.360 1.00 49.58 C
ATOM 12 O2' G A 84 35.516 163.329 20.936 1.00 48.50 O
ATOM 13 C1' G A 84 35.757 164.728 22.849 1.00 47.81 C
ATOM 14 N9 G A 84 35.026 165.778 23.548 1.00 45.38 N
ATOM 15 C8 G A 84 35.487 167.005 23.961 1.00 44.10 C
ATOM 16 N7 G A 84 34.569 167.721 24.554 1.00 43.75 N
ATOM 17 C5 G A 84 33.438 166.916 24.530 1.00 44.12 C
ATOM 18 C6 G A 84 32.119 167.154 25.014 1.00 45.44 C
ATOM 19 O6 G A 84 31.667 168.166 25.569 1.00 46.91 O
ATOM 20 N1 G A 84 31.288 166.059 24.791 1.00 45.46 N
ATOM 21 C2 G A 84 31.671 164.889 24.172 1.00 45.73 C
ATOM 22 N2 G A 84 30.734 163.929 24.058 1.00 45.28 N
ATOM 23 N3 G A 84 32.885 164.669 23.703 1.00 44.77 N
ATOM 24 C4 G A 84 33.709 165.714 23.917 1.00 44.42 C
ATOM 25 P A A 85 36.503 166.553 18.375 1.00 59.57 P
ATOM 26 OP1 A A 85 37.835 167.039 17.929 1.00 57.81 O
ATOM 27 OP2 A A 85 35.539 167.506 18.996 1.00 58.64 O
ATOM 28 O5' A A 85 35.766 165.861 17.143 1.00 61.54 O
TER
ATOM 1 O3' A B 86 38.547 164.591 13.673 1.00 64.80 O
ATOM 2 P G B 87 38.269 163.014 13.774 1.00 64.65 P
ATOM 3 OP1 G B 87 39.524 162.318 14.164 1.00 63.08 O
ATOM 4 OP2 G B 87 37.571 162.614 12.529 1.00 65.00 O
ATOM 5 O5' G B 87 37.215 162.890 14.962 1.00 65.49 O
ATOM 6 C5' G B 87 37.610 163.059 16.338 1.00 63.80 C
ATOM 7 C4' G B 87 37.039 161.939 17.173 1.00 61.95 C
ATOM 8 O4' G B 87 35.588 161.996 17.105 1.00 62.25 O
ATOM 9 C3' G B 87 37.422 160.543 16.702 1.00 60.86 C
ATOM 10 O3' G B 87 37.460 159.672 17.819 1.00 60.09 O
ATOM 11 C2' G B 87 36.270 160.180 15.774 1.00 60.99 C
ATOM 12 O2' G B 87 36.099 158.787 15.608 1.00 59.66 O
ATOM 13 C1' G B 87 35.085 160.820 16.499 1.00 62.45 C
ATOM 14 N9 G B 87 33.995 161.207 15.606 1.00 63.82 N
ATOM 15 C8 G B 87 34.104 161.932 14.443 1.00 64.33 C
ATOM 16 N7 G B 87 32.963 162.109 13.839 1.00 64.91 N
ATOM 17 C5 G B 87 32.039 161.468 14.651 1.00 65.02 C
ATOM 18 C6 G B 87 30.637 161.318 14.502 1.00 65.60 C
ATOM 19 O6 G B 87 29.910 161.729 13.588 1.00 66.49 O
ATOM 20 N1 G B 87 30.086 160.603 15.556 1.00 65.37 N
ATOM 21 C2 G B 87 30.789 160.093 16.614 1.00 65.31 C
ATOM 22 N2 G B 87 30.068 159.430 17.523 1.00 66.56 N
ATOM 23 N3 G B 87 32.098 160.220 16.767 1.00 64.66 N
ATOM 24 C4 G B 87 32.656 160.914 15.753 1.00 64.39 C
ATOM 25 P A B 88 38.800 158.857 18.147 1.00 60.01 P
ATOM 26 OP1 A B 88 39.866 159.265 17.190 1.00 60.68 O
ATOM 27 OP2 A B 88 38.439 157.429 18.263 1.00 59.98 O
ATOM 28 O5' A B 88 39.195 159.386 19.593 1.00 58.87 O
TER
ATOM 2 P G A 84 39.419 168.592 21.917 1.00 52.88 P
ATOM 3 OP1 G A 84 40.209 168.487 20.663 1.00 52.53 O
ATOM 4 OP2 G A 84 38.621 169.816 22.191 1.00 53.21 O
ATOM 5 O5' G A 84 38.422 167.357 21.965 1.00 53.45 O
ATOM 6 C5' G A 84 38.882 166.035 21.655 1.00 52.45 C
ATOM 7 C4' G A 84 37.720 165.084 21.627 1.00 51.57 C
ATOM 8 O4' G A 84 37.146 164.988 22.955 1.00 50.71 O
ATOM 9 C3' G A 84 36.539 165.535 20.790 1.00 52.88 C
ATOM 10 O3' G A 84 36.758 165.338 19.399 1.00 58.13 O
ATOM 11 C2' G A 84 35.424 164.673 21.360 1.00 49.58 C
ATOM 12 O2' G A 84 35.516 163.329 20.936 1.00 48.50 O
ATOM 13 C1' G A 84 35.757 164.728 22.849 1.00 47.81 C
ATOM 14 N9 G A 84 35.026 165.778 23.548 1.00 45.38 N
ATOM 15 C8 G A 84 35.487 167.005 23.961 1.00 44.10 C
ATOM 16 N7 G A 84 34.569 167.721 24.554 1.00 43.75 N
ATOM 17 C5 G A 84 33.438 166.916 24.530 1.00 44.12 C
ATOM 18 C6 G A 84 32.119 167.154 25.014 1.00 45.44 C
ATOM 19 O6 G A 84 31.667 168.166 25.569 1.00 46.91 O
ATOM 20 N1 G A 84 31.288 166.059 24.791 1.00 45.46 N
ATOM 21 C2 G A 84 31.671 164.889 24.172 1.00 45.73 C
ATOM 22 N2 G A 84 30.734 163.929 24.058 1.00 45.28 N
ATOM 23 N3 G A 84 32.885 164.669 23.703 1.00 44.77 N
ATOM 24 C4 G A 84 33.709 165.714 23.917 1.00 44.42 C
ATOM 25 P A A 85 36.503 166.553 18.375 1.00 59.57 P
ATOM 26 OP1 A A 85 37.835 167.039 17.929 1.00 57.81 O
ATOM 27 OP2 A A 85 35.539 167.506 18.996 1.00 58.64 O
ATOM 28 O5' A A 85 35.766 165.861 17.143 1.00 61.54 O
TER
ATOM 1 O3' A B 86 38.547 164.591 13.673 1.00 64.80 O
ATOM 2 P G B 87 38.269 163.014 13.774 1.00 64.65 P
ATOM 3 OP1 G B 87 39.524 162.318 14.164 1.00 63.08 O
ATOM 4 OP2 G B 87 37.571 162.614 12.529 1.00 65.00 O
ATOM 5 O5' G B 87 37.215 162.890 14.962 1.00 65.49 O
ATOM 6 C5' G B 87 37.610 163.059 16.338 1.00 63.80 C
ATOM 7 C4' G B 87 37.039 161.939 17.173 1.00 61.95 C
ATOM 8 O4' G B 87 35.588 161.996 17.105 1.00 62.25 O
ATOM 9 C3' G B 87 37.422 160.543 16.702 1.00 60.86 C
ATOM 10 O3' G B 87 37.460 159.672 17.819 1.00 60.09 O
ATOM 11 C2' G B 87 36.270 160.180 15.774 1.00 60.99 C
ATOM 12 O2' G B 87 36.099 158.787 15.608 1.00 59.66 O
ATOM 13 C1' G B 87 35.085 160.820 16.499 1.00 62.45 C
ATOM 14 N9 G B 87 33.995 161.207 15.606 1.00 63.82 N
ATOM 15 C8 G B 87 34.104 161.932 14.443 1.00 64.33 C
ATOM 16 N7 G B 87 32.963 162.109 13.839 1.00 64.91 N
ATOM 17 C5 G B 87 32.039 161.468 14.651 1.00 65.02 C
ATOM 18 C6 G B 87 30.637 161.318 14.502 1.00 65.60 C
ATOM 19 O6 G B 87 29.910 161.729 13.588 1.00 66.49 O
ATOM 20 N1 G B 87 30.086 160.603 15.556 1.00 65.37 N
ATOM 21 C2 G B 87 30.789 160.093 16.614 1.00 65.31 C
ATOM 22 N2 G B 87 30.068 159.430 17.523 1.00 66.56 N
ATOM 23 N3 G B 87 32.098 160.220 16.767 1.00 64.66 N
ATOM 24 C4 G B 87 32.656 160.914 15.753 1.00 64.39 C
ATOM 25 P A B 88 38.800 158.857 18.147 1.00 60.01 P
ATOM 26 OP1 A B 88 39.866 159.265 17.190 1.00 60.68 O
ATOM 27 OP2 A B 88 38.439 157.429 18.263 1.00 59.98 O
ATOM 28 O5' A B 88 39.195 159.386 19.593 1.00 58.87 O
TER
Atoms:
OP1: (40.209,168.487,20.663)
OP2: (38.621,169.816,22.191)
C3': (36.539,165.535,20.790)
C1': (35.757,164.728,22.849)
C5': (38.882,166.035,21.655)
O6: (31.667,168.166,25.569)
O4': (37.146,164.988,22.955)
C8: (35.487,167.005,23.961)
C2: (31.671,164.889,24.172)
C6: (32.119,167.154,25.014)
C5: (33.438,166.916,24.530)
C4: (33.709,165.714,23.917)
P: (39.419,168.592,21.917)
C4': (37.720,165.084,21.627)
C2': (35.424,164.673,21.360)
O2': (35.516,163.329,20.936)
N1: (31.288,166.059,24.791)
N2: (30.734,163.929,24.058)
N3: (32.885,164.669,23.703)
N7: (34.569,167.721,24.554)
N9: (35.026,165.778,23.548)
O5': (38.422,167.357,21.965)
O3': (36.758,165.338,19.399)
OP2: (38.621,169.816,22.191)
C3': (36.539,165.535,20.790)
C1': (35.757,164.728,22.849)
C5': (38.882,166.035,21.655)
O6: (31.667,168.166,25.569)
O4': (37.146,164.988,22.955)
C8: (35.487,167.005,23.961)
C2: (31.671,164.889,24.172)
C6: (32.119,167.154,25.014)
C5: (33.438,166.916,24.530)
C4: (33.709,165.714,23.917)
P: (39.419,168.592,21.917)
C4': (37.720,165.084,21.627)
C2': (35.424,164.673,21.360)
O2': (35.516,163.329,20.936)
N1: (31.288,166.059,24.791)
N2: (30.734,163.929,24.058)
N3: (32.885,164.669,23.703)
N7: (34.569,167.721,24.554)
N9: (35.026,165.778,23.548)
O5': (38.422,167.357,21.965)
O3': (36.758,165.338,19.399)
OP1: (39.524,162.318,14.164)
OP2: (37.571,162.614,12.529)
C3': (37.422,160.543,16.702)
C1': (35.085,160.820,16.499)
C5': (37.610,163.059,16.338)
O6: (29.910,161.729,13.588)
O4': (35.588,161.996,17.105)
C8: (34.104,161.932,14.443)
C2: (30.789,160.093,16.614)
C6: (30.637,161.318,14.502)
C5: (32.039,161.468,14.651)
C4: (32.656,160.914,15.753)
P: (38.269,163.014,13.774)
C4': (37.039,161.939,17.173)
C2': (36.270,160.180,15.774)
O2': (36.099,158.787,15.608)
N1: (30.086,160.603,15.556)
N2: (30.068,159.430,17.523)
N3: (32.098,160.220,16.767)
N7: (32.963,162.109,13.839)
N9: (33.995,161.207,15.606)
O5': (37.215,162.890,14.962)
O3': (37.460,159.672,17.819)
OP2: (37.571,162.614,12.529)
C3': (37.422,160.543,16.702)
C1': (35.085,160.820,16.499)
C5': (37.610,163.059,16.338)
O6: (29.910,161.729,13.588)
O4': (35.588,161.996,17.105)
C8: (34.104,161.932,14.443)
C2: (30.789,160.093,16.614)
C6: (30.637,161.318,14.502)
C5: (32.039,161.468,14.651)
C4: (32.656,160.914,15.753)
P: (38.269,163.014,13.774)
C4': (37.039,161.939,17.173)
C2': (36.270,160.180,15.774)
O2': (36.099,158.787,15.608)
N1: (30.086,160.603,15.556)
N2: (30.068,159.430,17.523)
N3: (32.098,160.220,16.767)
N7: (32.963,162.109,13.839)
N9: (33.995,161.207,15.606)
O5': (37.215,162.890,14.962)
O3': (37.460,159.672,17.819)
Image (generated by PyMOL):