ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A678:A681

Extra

PDB:
ATOM 1 O3' C A 677 88.963 11.893 -36.035 1.00 98.78 O
ATOM 2 P G A 678 89.617 10.970 -37.161 1.00101.83 P
ATOM 3 OP1 G A 678 88.497 10.319 -37.892 1.00 99.71 O
ATOM 4 OP2 G A 678 90.635 10.120 -36.494 1.00 83.38 O
ATOM 5 O5' G A 678 90.346 12.032 -38.104 1.00114.36 O
ATOM 6 C5' G A 678 89.597 12.995 -38.829 1.00116.25 C
ATOM 7 C4' G A 678 90.463 13.768 -39.792 1.00110.75 C
ATOM 8 O4' G A 678 91.331 14.675 -39.065 1.00101.31 O
ATOM 9 C3' G A 678 91.436 12.961 -40.629 1.00111.68 C
ATOM 10 O3' G A 678 90.827 12.271 -41.699 1.00112.43 O
ATOM 11 C2' G A 678 92.416 14.033 -41.067 1.00112.32 C
ATOM 12 O2' G A 678 91.829 14.879 -42.046 1.00118.09 O
ATOM 13 C1' G A 678 92.544 14.829 -39.772 1.00105.43 C
ATOM 14 N9 G A 678 93.636 14.315 -38.935 1.00100.22 N
ATOM 15 C8 G A 678 93.510 13.542 -37.816 1.00100.88 C
ATOM 16 N7 G A 678 94.668 13.229 -37.293 1.00 99.26 N
ATOM 17 C5 G A 678 95.604 13.821 -38.122 1.00 90.62 C
ATOM 18 C6 G A 678 97.015 13.818 -38.053 1.00 94.17 C
ATOM 19 O6 G A 678 97.757 13.277 -37.221 1.00101.70 O
ATOM 20 N1 G A 678 97.572 14.541 -39.095 1.00 91.75 N
ATOM 21 C2 G A 678 96.862 15.183 -40.071 1.00 96.20 C
ATOM 22 N2 G A 678 97.596 15.833 -40.981 1.00101.40 N
ATOM 23 N3 G A 678 95.546 15.189 -40.149 1.00 97.49 N
ATOM 24 C4 G A 678 94.985 14.492 -39.146 1.00 96.31 C
ATOM 25 P C A 679 91.322 10.794 -42.078 1.00 93.24 P
ATOM 26 OP1 C A 679 90.166 9.889 -41.875 1.00117.28 O
ATOM 27 OP2 C A 679 92.568 10.541 -41.325 1.00112.77 O
ATOM 28 O5' C A 679 91.654 10.916 -43.632 1.00116.77 O
TER

ATOM 1 O3' A B 680 87.314 9.064 -45.480 1.00112.09 O
ATOM 2 P G B 681 86.582 10.391 -46.014 1.00123.53 P
ATOM 3 OP1 G B 681 85.463 10.689 -45.074 1.00106.25 O
ATOM 4 OP2 G B 681 86.268 10.169 -47.452 1.00100.90 O
ATOM 5 O5' G B 681 87.725 11.496 -45.868 1.00113.82 O
ATOM 6 C5' G B 681 88.130 11.971 -44.585 1.00106.47 C
ATOM 7 C4' G B 681 88.507 13.430 -44.626 1.00106.97 C
ATOM 8 O4' G B 681 89.762 13.574 -45.348 1.00100.80 O
ATOM 9 C3' G B 681 87.500 14.329 -45.331 1.00100.90 C
ATOM 10 O3' G B 681 87.507 15.623 -44.731 1.00 88.08 O
ATOM 11 C2' G B 681 88.056 14.403 -46.746 1.00107.24 C
ATOM 12 O2' G B 681 87.661 15.544 -47.471 1.00114.04 O
ATOM 13 C1' G B 681 89.569 14.370 -46.502 1.00114.01 C
ATOM 14 N9 G B 681 90.327 13.756 -47.600 1.00141.29 N
ATOM 15 C8 G B 681 89.945 12.610 -48.256 1.00141.21 C
ATOM 16 N7 G B 681 90.772 12.251 -49.196 1.00147.19 N
ATOM 17 C5 G B 681 91.771 13.214 -49.169 1.00147.80 C
ATOM 18 C6 G B 681 92.937 13.337 -49.967 1.00147.02 C
ATOM 19 O6 G B 681 93.331 12.604 -50.878 1.00149.49 O
ATOM 20 N1 G B 681 93.679 14.451 -49.624 1.00146.91 N
ATOM 21 C2 G B 681 93.348 15.330 -48.631 1.00146.97 C
ATOM 22 N2 G B 681 94.204 16.343 -48.453 1.00146.46 N
ATOM 23 N3 G B 681 92.265 15.231 -47.874 1.00146.82 N
ATOM 24 C4 G B 681 91.515 14.154 -48.191 1.00145.89 C
ATOM 25 P A B 682 86.177 16.521 -44.751 1.00101.54 P
ATOM 26 OP1 A B 682 85.018 15.595 -44.858 1.00107.79 O
ATOM 27 OP2 A B 682 86.358 17.548 -45.802 1.00117.73 O
ATOM 28 O5' A B 682 86.183 17.216 -43.326 1.00 87.23 O
TER

Atoms:
OP1: (88.497,10.319,-37.892)
OP2: (90.635,10.120,-36.494)
C3': (91.436,12.961,-40.629)
C1': (92.544,14.829,-39.772)
C5': (89.597,12.995,-38.829)
O6: (97.757,13.277,-37.221)
O4': (91.331,14.675,-39.065)
C8: (93.510,13.542,-37.816)
C2: (96.862,15.183,-40.071)
C6: (97.015,13.818,-38.053)
C5: (95.604,13.821,-38.122)
C4: (94.985,14.492,-39.146)
P: (89.617,10.970,-37.161)
C4': (90.463,13.768,-39.792)
C2': (92.416,14.033,-41.067)
O2': (91.829,14.879,-42.046)
N1: (97.572,14.541,-39.095)
N2: (97.596,15.833,-40.981)
N3: (95.546,15.189,-40.149)
N7: (94.668,13.229,-37.293)
N9: (93.636,14.315,-38.935)
O5': (90.346,12.032,-38.104)
O3': (90.827,12.271,-41.699)
OP1: (85.463,10.689,-45.074)
OP2: (86.268,10.169,-47.452)
C3': (87.500,14.329,-45.331)
C1': (89.569,14.370,-46.502)
C5': (88.130,11.971,-44.585)
O6: (93.331,12.604,-50.878)
O4': (89.762,13.574,-45.348)
C8: (89.945,12.610,-48.256)
C2: (93.348,15.330,-48.631)
C6: (92.937,13.337,-49.967)
C5: (91.771,13.214,-49.169)
C4: (91.515,14.154,-48.191)
P: (86.582,10.391,-46.014)
C4': (88.507,13.430,-44.626)
C2': (88.056,14.403,-46.746)
O2': (87.661,15.544,-47.471)
N1: (93.679,14.451,-49.624)
N2: (94.204,16.343,-48.453)
N3: (92.265,15.231,-47.874)
N7: (90.772,12.251,-49.196)
N9: (90.327,13.756,-47.600)
O5': (87.725,11.496,-45.868)
O3': (87.507,15.623,-44.731)
Image (generated by PyMOL):
PyMOL image
show in jmol