Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1142:1145
Extra
PDB:
ATOM 1 O3' A A 141 46.009 -29.587 153.961 1.00 63.09 O
ATOM 2 P G A 142 44.805 -30.611 154.237 1.00 69.70 P
ATOM 3 OP1 G A 142 43.880 -30.503 153.086 1.00 68.98 O
ATOM 4 OP2 G A 142 44.282 -30.330 155.588 1.00 70.38 O
ATOM 5 O5' G A 142 45.525 -32.024 154.233 1.00 69.92 O
ATOM 6 C5' G A 142 46.193 -32.509 153.089 1.00 69.40 C
ATOM 7 C4' G A 142 47.031 -33.698 153.439 1.00 69.82 C
ATOM 8 O4' G A 142 48.135 -33.276 154.272 1.00 70.33 O
ATOM 9 C3' G A 142 46.338 -34.767 154.263 1.00 70.35 C
ATOM 10 O3' G A 142 45.573 -35.650 153.475 1.00 69.97 O
ATOM 11 C2' G A 142 47.501 -35.446 154.953 1.00 70.94 C
ATOM 12 O2' G A 142 48.162 -36.323 154.063 1.00 70.63 O
ATOM 13 C1' G A 142 48.416 -34.259 155.231 1.00 71.03 C
ATOM 14 N9 G A 142 48.151 -33.698 156.550 1.00 71.68 N
ATOM 15 C8 G A 142 47.243 -32.740 156.902 1.00 71.67 C
ATOM 16 N7 G A 142 47.210 -32.510 158.181 1.00 72.37 N
ATOM 17 C5 G A 142 48.156 -33.393 158.674 1.00 72.87 C
ATOM 18 C6 G A 142 48.576 -33.612 159.989 1.00 73.71 C
ATOM 19 O6 G A 142 48.165 -33.025 160.975 1.00 74.19 O
ATOM 20 N1 G A 142 49.543 -34.606 160.072 1.00 74.00 N
ATOM 21 C2 G A 142 50.047 -35.305 158.988 1.00 73.51 C
ATOM 22 N2 G A 142 50.995 -36.234 159.216 1.00 73.88 N
ATOM 23 N3 G A 142 49.656 -35.107 157.745 1.00 72.71 N
ATOM 24 C4 G A 142 48.724 -34.145 157.683 1.00 72.44 C
ATOM 25 P U A 143 44.026 -35.908 153.794 1.00 66.28 P
ATOM 26 OP1 U A 143 43.273 -35.501 152.598 1.00 65.51 O
ATOM 27 OP2 U A 143 43.721 -35.256 155.084 1.00 66.88 O
ATOM 28 O5' U A 143 43.973 -37.483 153.960 1.00 66.59 O
TER
ATOM 1 O3' U B 144 42.173 -38.718 150.260 1.00 61.38 O
ATOM 2 P G B 145 43.451 -39.371 149.508 1.00 63.94 P
ATOM 3 OP1 G B 145 43.836 -38.427 148.398 1.00 63.25 O
ATOM 4 OP2 G B 145 43.088 -40.762 149.158 1.00 63.97 O
ATOM 5 O5' G B 145 44.576 -39.390 150.643 1.00 64.63 O
ATOM 6 C5' G B 145 45.335 -38.230 150.971 1.00 64.69 C
ATOM 7 C4' G B 145 46.751 -38.596 151.323 1.00 65.06 C
ATOM 8 O4' G B 145 46.742 -39.480 152.481 1.00 65.83 O
ATOM 9 C3' G B 145 47.491 -39.345 150.228 1.00 64.67 C
ATOM 10 O3' G B 145 48.830 -38.917 150.172 1.00 64.70 O
ATOM 11 C2' G B 145 47.448 -40.793 150.688 1.00 65.15 C
ATOM 12 O2' G B 145 48.511 -41.593 150.231 1.00 65.16 O
ATOM 13 C1' G B 145 47.474 -40.656 152.192 1.00 65.94 C
ATOM 14 N9 G B 145 46.848 -41.806 152.854 1.00 66.44 N
ATOM 15 C8 G B 145 45.665 -42.358 152.465 1.00 66.22 C
ATOM 16 N7 G B 145 45.331 -43.424 153.098 1.00 66.73 N
ATOM 17 C5 G B 145 46.369 -43.619 153.933 1.00 67.32 C
ATOM 18 C6 G B 145 46.513 -44.638 154.864 1.00 68.05 C
ATOM 19 O6 G B 145 45.697 -45.553 155.071 1.00 68.27 O
ATOM 20 N1 G B 145 47.722 -44.513 155.556 1.00 68.53 N
ATOM 21 C2 G B 145 48.634 -43.510 155.351 1.00 68.32 C
ATOM 22 N2 G B 145 49.740 -43.533 156.094 1.00 68.86 N
ATOM 23 N3 G B 145 48.479 -42.542 154.473 1.00 67.63 N
ATOM 24 C4 G B 145 47.327 -42.661 153.800 1.00 67.16 C
ATOM 25 P U B 146 49.615 -38.975 148.778 1.00 58.20 P
ATOM 26 OP1 U B 146 48.762 -38.328 147.754 1.00 57.48 O
ATOM 27 OP2 U B 146 50.021 -40.372 148.556 1.00 58.37 O
ATOM 28 O5' U B 146 50.884 -38.075 149.098 1.00 58.36 O
TER
ATOM 2 P G A 142 44.805 -30.611 154.237 1.00 69.70 P
ATOM 3 OP1 G A 142 43.880 -30.503 153.086 1.00 68.98 O
ATOM 4 OP2 G A 142 44.282 -30.330 155.588 1.00 70.38 O
ATOM 5 O5' G A 142 45.525 -32.024 154.233 1.00 69.92 O
ATOM 6 C5' G A 142 46.193 -32.509 153.089 1.00 69.40 C
ATOM 7 C4' G A 142 47.031 -33.698 153.439 1.00 69.82 C
ATOM 8 O4' G A 142 48.135 -33.276 154.272 1.00 70.33 O
ATOM 9 C3' G A 142 46.338 -34.767 154.263 1.00 70.35 C
ATOM 10 O3' G A 142 45.573 -35.650 153.475 1.00 69.97 O
ATOM 11 C2' G A 142 47.501 -35.446 154.953 1.00 70.94 C
ATOM 12 O2' G A 142 48.162 -36.323 154.063 1.00 70.63 O
ATOM 13 C1' G A 142 48.416 -34.259 155.231 1.00 71.03 C
ATOM 14 N9 G A 142 48.151 -33.698 156.550 1.00 71.68 N
ATOM 15 C8 G A 142 47.243 -32.740 156.902 1.00 71.67 C
ATOM 16 N7 G A 142 47.210 -32.510 158.181 1.00 72.37 N
ATOM 17 C5 G A 142 48.156 -33.393 158.674 1.00 72.87 C
ATOM 18 C6 G A 142 48.576 -33.612 159.989 1.00 73.71 C
ATOM 19 O6 G A 142 48.165 -33.025 160.975 1.00 74.19 O
ATOM 20 N1 G A 142 49.543 -34.606 160.072 1.00 74.00 N
ATOM 21 C2 G A 142 50.047 -35.305 158.988 1.00 73.51 C
ATOM 22 N2 G A 142 50.995 -36.234 159.216 1.00 73.88 N
ATOM 23 N3 G A 142 49.656 -35.107 157.745 1.00 72.71 N
ATOM 24 C4 G A 142 48.724 -34.145 157.683 1.00 72.44 C
ATOM 25 P U A 143 44.026 -35.908 153.794 1.00 66.28 P
ATOM 26 OP1 U A 143 43.273 -35.501 152.598 1.00 65.51 O
ATOM 27 OP2 U A 143 43.721 -35.256 155.084 1.00 66.88 O
ATOM 28 O5' U A 143 43.973 -37.483 153.960 1.00 66.59 O
TER
ATOM 1 O3' U B 144 42.173 -38.718 150.260 1.00 61.38 O
ATOM 2 P G B 145 43.451 -39.371 149.508 1.00 63.94 P
ATOM 3 OP1 G B 145 43.836 -38.427 148.398 1.00 63.25 O
ATOM 4 OP2 G B 145 43.088 -40.762 149.158 1.00 63.97 O
ATOM 5 O5' G B 145 44.576 -39.390 150.643 1.00 64.63 O
ATOM 6 C5' G B 145 45.335 -38.230 150.971 1.00 64.69 C
ATOM 7 C4' G B 145 46.751 -38.596 151.323 1.00 65.06 C
ATOM 8 O4' G B 145 46.742 -39.480 152.481 1.00 65.83 O
ATOM 9 C3' G B 145 47.491 -39.345 150.228 1.00 64.67 C
ATOM 10 O3' G B 145 48.830 -38.917 150.172 1.00 64.70 O
ATOM 11 C2' G B 145 47.448 -40.793 150.688 1.00 65.15 C
ATOM 12 O2' G B 145 48.511 -41.593 150.231 1.00 65.16 O
ATOM 13 C1' G B 145 47.474 -40.656 152.192 1.00 65.94 C
ATOM 14 N9 G B 145 46.848 -41.806 152.854 1.00 66.44 N
ATOM 15 C8 G B 145 45.665 -42.358 152.465 1.00 66.22 C
ATOM 16 N7 G B 145 45.331 -43.424 153.098 1.00 66.73 N
ATOM 17 C5 G B 145 46.369 -43.619 153.933 1.00 67.32 C
ATOM 18 C6 G B 145 46.513 -44.638 154.864 1.00 68.05 C
ATOM 19 O6 G B 145 45.697 -45.553 155.071 1.00 68.27 O
ATOM 20 N1 G B 145 47.722 -44.513 155.556 1.00 68.53 N
ATOM 21 C2 G B 145 48.634 -43.510 155.351 1.00 68.32 C
ATOM 22 N2 G B 145 49.740 -43.533 156.094 1.00 68.86 N
ATOM 23 N3 G B 145 48.479 -42.542 154.473 1.00 67.63 N
ATOM 24 C4 G B 145 47.327 -42.661 153.800 1.00 67.16 C
ATOM 25 P U B 146 49.615 -38.975 148.778 1.00 58.20 P
ATOM 26 OP1 U B 146 48.762 -38.328 147.754 1.00 57.48 O
ATOM 27 OP2 U B 146 50.021 -40.372 148.556 1.00 58.37 O
ATOM 28 O5' U B 146 50.884 -38.075 149.098 1.00 58.36 O
TER
Atoms:
OP1: (43.880,-30.503,153.086)
OP2: (44.282,-30.330,155.588)
C3': (46.338,-34.767,154.263)
C1': (48.416,-34.259,155.231)
C5': (46.193,-32.509,153.089)
O6: (48.165,-33.025,160.975)
O4': (48.135,-33.276,154.272)
C8: (47.243,-32.740,156.902)
C2: (50.047,-35.305,158.988)
C6: (48.576,-33.612,159.989)
C5: (48.156,-33.393,158.674)
C4: (48.724,-34.145,157.683)
P: (44.805,-30.611,154.237)
C4': (47.031,-33.698,153.439)
C2': (47.501,-35.446,154.953)
O2': (48.162,-36.323,154.063)
N1: (49.543,-34.606,160.072)
N2: (50.995,-36.234,159.216)
N3: (49.656,-35.107,157.745)
N7: (47.210,-32.510,158.181)
N9: (48.151,-33.698,156.550)
O5': (45.525,-32.024,154.233)
O3': (45.573,-35.650,153.475)
OP2: (44.282,-30.330,155.588)
C3': (46.338,-34.767,154.263)
C1': (48.416,-34.259,155.231)
C5': (46.193,-32.509,153.089)
O6: (48.165,-33.025,160.975)
O4': (48.135,-33.276,154.272)
C8: (47.243,-32.740,156.902)
C2: (50.047,-35.305,158.988)
C6: (48.576,-33.612,159.989)
C5: (48.156,-33.393,158.674)
C4: (48.724,-34.145,157.683)
P: (44.805,-30.611,154.237)
C4': (47.031,-33.698,153.439)
C2': (47.501,-35.446,154.953)
O2': (48.162,-36.323,154.063)
N1: (49.543,-34.606,160.072)
N2: (50.995,-36.234,159.216)
N3: (49.656,-35.107,157.745)
N7: (47.210,-32.510,158.181)
N9: (48.151,-33.698,156.550)
O5': (45.525,-32.024,154.233)
O3': (45.573,-35.650,153.475)
OP1: (43.836,-38.427,148.398)
OP2: (43.088,-40.762,149.158)
C3': (47.491,-39.345,150.228)
C1': (47.474,-40.656,152.192)
C5': (45.335,-38.230,150.971)
O6: (45.697,-45.553,155.071)
O4': (46.742,-39.480,152.481)
C8: (45.665,-42.358,152.465)
C2: (48.634,-43.510,155.351)
C6: (46.513,-44.638,154.864)
C5: (46.369,-43.619,153.933)
C4: (47.327,-42.661,153.800)
P: (43.451,-39.371,149.508)
C4': (46.751,-38.596,151.323)
C2': (47.448,-40.793,150.688)
O2': (48.511,-41.593,150.231)
N1: (47.722,-44.513,155.556)
N2: (49.740,-43.533,156.094)
N3: (48.479,-42.542,154.473)
N7: (45.331,-43.424,153.098)
N9: (46.848,-41.806,152.854)
O5': (44.576,-39.390,150.643)
O3': (48.830,-38.917,150.172)
OP2: (43.088,-40.762,149.158)
C3': (47.491,-39.345,150.228)
C1': (47.474,-40.656,152.192)
C5': (45.335,-38.230,150.971)
O6: (45.697,-45.553,155.071)
O4': (46.742,-39.480,152.481)
C8: (45.665,-42.358,152.465)
C2: (48.634,-43.510,155.351)
C6: (46.513,-44.638,154.864)
C5: (46.369,-43.619,153.933)
C4: (47.327,-42.661,153.800)
P: (43.451,-39.371,149.508)
C4': (46.751,-38.596,151.323)
C2': (47.448,-40.793,150.688)
O2': (48.511,-41.593,150.231)
N1: (47.722,-44.513,155.556)
N2: (49.740,-43.533,156.094)
N3: (48.479,-42.542,154.473)
N7: (45.331,-43.424,153.098)
N9: (46.848,-41.806,152.854)
O5': (44.576,-39.390,150.643)
O3': (48.830,-38.917,150.172)
Image (generated by PyMOL):