Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02418:02395
Extra
PDB:
ATOM 1 O3' A A2417 53.621 122.205 139.739 1.00 47.66 O
ATOM 2 P A A2418 53.721 122.168 138.129 1.00 47.91 P
ATOM 3 OP1 A A2418 52.545 122.904 137.612 1.00 48.58 O
ATOM 4 OP2 A A2418 53.971 120.776 137.685 1.00 46.82 O
ATOM 5 O5' A A2418 55.007 123.036 137.792 1.00 46.30 O
ATOM 6 C5' A A2418 55.142 124.368 138.313 1.00 46.73 C
ATOM 7 C4' A A2418 55.626 125.298 137.233 1.00 47.68 C
ATOM 8 O4' A A2418 56.955 124.890 136.816 1.00 46.92 O
ATOM 9 C3' A A2418 54.780 125.309 135.972 1.00 48.26 C
ATOM 10 O3' A A2418 54.839 126.597 135.370 1.00 49.49 O
ATOM 11 C2' A A2418 55.458 124.251 135.113 1.00 48.03 C
ATOM 12 O2' A A2418 55.247 124.454 133.731 1.00 52.63 O
ATOM 13 C1' A A2418 56.928 124.451 135.477 1.00 45.66 C
ATOM 14 N9 A A2418 57.736 123.233 135.404 1.00 42.83 N
ATOM 15 C8 A A2418 57.320 121.924 135.328 1.00 41.54 C
ATOM 16 N7 A A2418 58.301 121.059 135.292 1.00 40.34 N
ATOM 17 C5 A A2418 59.442 121.848 135.342 1.00 41.81 C
ATOM 18 C6 A A2418 60.814 121.531 135.330 1.00 41.89 C
ATOM 19 N6 A A2418 61.282 120.285 135.242 1.00 42.12 N
ATOM 20 N1 A A2418 61.698 122.551 135.404 1.00 40.41 N
ATOM 21 C2 A A2418 61.224 123.800 135.475 1.00 41.27 C
ATOM 22 N3 A A2418 59.960 124.226 135.483 1.00 41.18 N
ATOM 23 C4 A A2418 59.109 123.188 135.414 1.00 41.99 C
ATOM 24 P G A2419 53.473 127.347 134.964 1.00 52.71 P
ATOM 25 OP1 G A2419 52.330 126.683 135.657 1.00 51.88 O
ATOM 26 OP2 G A2419 53.444 127.498 133.482 1.00 54.25 O
ATOM 27 O5' G A2419 53.631 128.799 135.589 1.00 50.00 O
TER
ATOM 1 O3' A B2394 62.851 115.016 135.532 1.00 45.93 O
ATOM 2 P U B2395 62.872 115.856 136.900 1.00 49.17 P
ATOM 3 OP1 U B2395 64.171 115.544 137.545 1.00 48.80 O
ATOM 4 OP2 U B2395 61.608 115.622 137.648 1.00 48.33 O
ATOM 5 O5' U B2395 62.919 117.373 136.422 1.00 47.17 O
ATOM 6 C5' U B2395 64.075 117.894 135.743 1.00 45.11 C
ATOM 7 C4' U B2395 64.737 118.956 136.589 1.00 43.70 C
ATOM 8 O4' U B2395 63.824 120.072 136.762 1.00 43.39 O
ATOM 9 C3' U B2395 65.142 118.531 137.994 1.00 42.45 C
ATOM 10 O3' U B2395 66.218 119.355 138.394 1.00 45.20 O
ATOM 11 C2' U B2395 63.936 118.945 138.820 1.00 41.78 C
ATOM 12 O2' U B2395 64.274 119.156 140.178 1.00 42.07 O
ATOM 13 C1' U B2395 63.561 120.262 138.136 1.00 41.22 C
ATOM 14 N1 U B2395 62.157 120.682 138.283 1.00 39.96 N
ATOM 15 C2 U B2395 61.911 122.014 138.577 1.00 38.15 C
ATOM 16 O2 U B2395 62.792 122.845 138.695 1.00 38.12 O
ATOM 17 N3 U B2395 60.592 122.335 138.724 1.00 36.25 N
ATOM 18 C4 U B2395 59.519 121.490 138.604 1.00 37.07 C
ATOM 19 O4 U B2395 58.391 121.924 138.814 1.00 39.89 O
ATOM 20 C5 U B2395 59.847 120.142 138.282 1.00 36.79 C
ATOM 21 C6 U B2395 61.118 119.790 138.140 1.00 37.74 C
ATOM 22 P C B2396 67.687 118.750 138.527 1.00 46.48 P
ATOM 23 OP1 C B2396 68.136 118.305 137.190 1.00 48.26 O
ATOM 24 OP2 C B2396 67.665 117.787 139.646 1.00 47.59 O
ATOM 25 O5' C B2396 68.529 120.027 138.950 1.00 44.11 O
TER
ATOM 2 P A A2418 53.721 122.168 138.129 1.00 47.91 P
ATOM 3 OP1 A A2418 52.545 122.904 137.612 1.00 48.58 O
ATOM 4 OP2 A A2418 53.971 120.776 137.685 1.00 46.82 O
ATOM 5 O5' A A2418 55.007 123.036 137.792 1.00 46.30 O
ATOM 6 C5' A A2418 55.142 124.368 138.313 1.00 46.73 C
ATOM 7 C4' A A2418 55.626 125.298 137.233 1.00 47.68 C
ATOM 8 O4' A A2418 56.955 124.890 136.816 1.00 46.92 O
ATOM 9 C3' A A2418 54.780 125.309 135.972 1.00 48.26 C
ATOM 10 O3' A A2418 54.839 126.597 135.370 1.00 49.49 O
ATOM 11 C2' A A2418 55.458 124.251 135.113 1.00 48.03 C
ATOM 12 O2' A A2418 55.247 124.454 133.731 1.00 52.63 O
ATOM 13 C1' A A2418 56.928 124.451 135.477 1.00 45.66 C
ATOM 14 N9 A A2418 57.736 123.233 135.404 1.00 42.83 N
ATOM 15 C8 A A2418 57.320 121.924 135.328 1.00 41.54 C
ATOM 16 N7 A A2418 58.301 121.059 135.292 1.00 40.34 N
ATOM 17 C5 A A2418 59.442 121.848 135.342 1.00 41.81 C
ATOM 18 C6 A A2418 60.814 121.531 135.330 1.00 41.89 C
ATOM 19 N6 A A2418 61.282 120.285 135.242 1.00 42.12 N
ATOM 20 N1 A A2418 61.698 122.551 135.404 1.00 40.41 N
ATOM 21 C2 A A2418 61.224 123.800 135.475 1.00 41.27 C
ATOM 22 N3 A A2418 59.960 124.226 135.483 1.00 41.18 N
ATOM 23 C4 A A2418 59.109 123.188 135.414 1.00 41.99 C
ATOM 24 P G A2419 53.473 127.347 134.964 1.00 52.71 P
ATOM 25 OP1 G A2419 52.330 126.683 135.657 1.00 51.88 O
ATOM 26 OP2 G A2419 53.444 127.498 133.482 1.00 54.25 O
ATOM 27 O5' G A2419 53.631 128.799 135.589 1.00 50.00 O
TER
ATOM 1 O3' A B2394 62.851 115.016 135.532 1.00 45.93 O
ATOM 2 P U B2395 62.872 115.856 136.900 1.00 49.17 P
ATOM 3 OP1 U B2395 64.171 115.544 137.545 1.00 48.80 O
ATOM 4 OP2 U B2395 61.608 115.622 137.648 1.00 48.33 O
ATOM 5 O5' U B2395 62.919 117.373 136.422 1.00 47.17 O
ATOM 6 C5' U B2395 64.075 117.894 135.743 1.00 45.11 C
ATOM 7 C4' U B2395 64.737 118.956 136.589 1.00 43.70 C
ATOM 8 O4' U B2395 63.824 120.072 136.762 1.00 43.39 O
ATOM 9 C3' U B2395 65.142 118.531 137.994 1.00 42.45 C
ATOM 10 O3' U B2395 66.218 119.355 138.394 1.00 45.20 O
ATOM 11 C2' U B2395 63.936 118.945 138.820 1.00 41.78 C
ATOM 12 O2' U B2395 64.274 119.156 140.178 1.00 42.07 O
ATOM 13 C1' U B2395 63.561 120.262 138.136 1.00 41.22 C
ATOM 14 N1 U B2395 62.157 120.682 138.283 1.00 39.96 N
ATOM 15 C2 U B2395 61.911 122.014 138.577 1.00 38.15 C
ATOM 16 O2 U B2395 62.792 122.845 138.695 1.00 38.12 O
ATOM 17 N3 U B2395 60.592 122.335 138.724 1.00 36.25 N
ATOM 18 C4 U B2395 59.519 121.490 138.604 1.00 37.07 C
ATOM 19 O4 U B2395 58.391 121.924 138.814 1.00 39.89 O
ATOM 20 C5 U B2395 59.847 120.142 138.282 1.00 36.79 C
ATOM 21 C6 U B2395 61.118 119.790 138.140 1.00 37.74 C
ATOM 22 P C B2396 67.687 118.750 138.527 1.00 46.48 P
ATOM 23 OP1 C B2396 68.136 118.305 137.190 1.00 48.26 O
ATOM 24 OP2 C B2396 67.665 117.787 139.646 1.00 47.59 O
ATOM 25 O5' C B2396 68.529 120.027 138.950 1.00 44.11 O
TER
Atoms:
OP1: (52.545,122.904,137.612)
OP2: (53.971,120.776,137.685)
C3': (54.780,125.309,135.972)
C1': (56.928,124.451,135.477)
C5': (55.142,124.368,138.313)
O4': (56.955,124.890,136.816)
C8: (57.320,121.924,135.328)
O2': (55.247,124.454,133.731)
C6: (60.814,121.531,135.330)
C5: (59.442,121.848,135.342)
C4: (59.109,123.188,135.414)
P: (53.721,122.168,138.129)
C4': (55.626,125.298,137.233)
C2': (55.458,124.251,135.113)
C2: (61.224,123.800,135.475)
N1: (61.698,122.551,135.404)
N3: (59.960,124.226,135.483)
N6: (61.282,120.285,135.242)
N7: (58.301,121.059,135.292)
N9: (57.736,123.233,135.404)
O5': (55.007,123.036,137.792)
O3': (54.839,126.597,135.370)
OP2: (53.971,120.776,137.685)
C3': (54.780,125.309,135.972)
C1': (56.928,124.451,135.477)
C5': (55.142,124.368,138.313)
O4': (56.955,124.890,136.816)
C8: (57.320,121.924,135.328)
O2': (55.247,124.454,133.731)
C6: (60.814,121.531,135.330)
C5: (59.442,121.848,135.342)
C4: (59.109,123.188,135.414)
P: (53.721,122.168,138.129)
C4': (55.626,125.298,137.233)
C2': (55.458,124.251,135.113)
C2: (61.224,123.800,135.475)
N1: (61.698,122.551,135.404)
N3: (59.960,124.226,135.483)
N6: (61.282,120.285,135.242)
N7: (58.301,121.059,135.292)
N9: (57.736,123.233,135.404)
O5': (55.007,123.036,137.792)
O3': (54.839,126.597,135.370)
C4: (59.519,121.490,138.604)
N3: (60.592,122.335,138.724)
OP1: (64.171,115.544,137.545)
OP2: (61.608,115.622,137.648)
C2: (61.911,122.014,138.577)
C1': (63.561,120.262,138.136)
C3': (65.142,118.531,137.994)
O5': (62.919,117.373,136.422)
O4': (63.824,120.072,136.762)
C5': (64.075,117.894,135.743)
P: (62.872,115.856,136.900)
C4': (64.737,118.956,136.589)
C2': (63.936,118.945,138.820)
O2': (64.274,119.156,140.178)
N1: (62.157,120.682,138.283)
O4: (58.391,121.924,138.814)
O2: (62.792,122.845,138.695)
C6: (61.118,119.790,138.140)
C5: (59.847,120.142,138.282)
O3': (66.218,119.355,138.394)
N3: (60.592,122.335,138.724)
OP1: (64.171,115.544,137.545)
OP2: (61.608,115.622,137.648)
C2: (61.911,122.014,138.577)
C1': (63.561,120.262,138.136)
C3': (65.142,118.531,137.994)
O5': (62.919,117.373,136.422)
O4': (63.824,120.072,136.762)
C5': (64.075,117.894,135.743)
P: (62.872,115.856,136.900)
C4': (64.737,118.956,136.589)
C2': (63.936,118.945,138.820)
O2': (64.274,119.156,140.178)
N1: (62.157,120.682,138.283)
O4: (58.391,121.924,138.814)
O2: (62.792,122.845,138.695)
C6: (61.118,119.790,138.140)
C5: (59.847,120.142,138.282)
O3': (66.218,119.355,138.394)
Image (generated by PyMOL):