ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:943:938

Extra

PDB:
ATOM 1 O3' G A 42 84.392 17.396 96.037 1.00 81.56 O
ATOM 2 P A A 43 84.499 17.101 97.615 1.00 80.13 P
ATOM 3 OP1 A A 43 85.925 17.114 98.048 1.00 80.79 O
ATOM 4 OP2 A A 43 83.658 15.908 97.878 1.00 78.96 O
ATOM 5 O5' A A 43 83.778 18.364 98.260 1.00 80.78 O
ATOM 6 C5' A A 43 83.540 18.460 99.677 1.00 81.10 C
ATOM 7 C4' A A 43 83.210 19.890 100.043 1.00 81.19 C
ATOM 8 O4' A A 43 84.392 20.714 99.862 1.00 81.46 O
ATOM 9 C3' A A 43 82.163 20.544 99.155 1.00 80.59 C
ATOM 10 O3' A A 43 80.839 20.228 99.549 1.00 79.03 O
ATOM 11 C2' A A 43 82.502 22.022 99.275 1.00 81.32 C
ATOM 12 O2' A A 43 82.016 22.613 100.467 1.00 81.05 O
ATOM 13 C1' A A 43 84.032 21.963 99.293 1.00 81.42 C
ATOM 14 N9 A A 43 84.621 22.031 97.951 1.00 81.55 N
ATOM 15 C8 A A 43 85.151 21.003 97.205 1.00 80.93 C
ATOM 16 N7 A A 43 85.581 21.372 96.024 1.00 81.03 N
ATOM 17 C5 A A 43 85.321 22.736 95.987 1.00 82.32 C
ATOM 18 C6 A A 43 85.529 23.713 94.996 1.00 83.27 C
ATOM 19 N6 A A 43 86.076 23.456 93.804 1.00 83.53 N
ATOM 20 N1 A A 43 85.148 24.980 95.273 1.00 83.66 N
ATOM 21 C2 A A 43 84.599 25.237 96.470 1.00 83.63 C
ATOM 22 N3 A A 43 84.353 24.406 97.481 1.00 82.68 N
ATOM 23 C4 A A 43 84.739 23.156 97.171 1.00 82.09 C
ATOM 24 P A A 44 79.741 19.915 98.425 1.00 78.42 P
ATOM 25 OP1 A A 44 78.444 19.739 99.125 1.00 78.40 O
ATOM 26 OP2 A A 44 80.249 18.837 97.532 1.00 77.11 O
ATOM 27 O5' A A 44 79.679 21.265 97.584 1.00 79.19 O
TER

ATOM 1 O3' A B 37 85.661 25.041 87.179 1.00 74.65 O
ATOM 2 P U B 38 87.008 25.604 86.520 1.00 76.60 P
ATOM 3 OP1 U B 38 86.576 26.507 85.427 1.00 77.80 O
ATOM 4 OP2 U B 38 87.907 24.463 86.219 1.00 77.16 O
ATOM 5 O5' U B 38 87.680 26.468 87.674 1.00 76.79 O
ATOM 6 C5' U B 38 86.866 27.135 88.642 1.00 80.16 C
ATOM 7 C4' U B 38 87.060 26.510 90.002 1.00 81.78 C
ATOM 8 O4' U B 38 87.184 25.085 89.844 1.00 81.90 O
ATOM 9 C3' U B 38 88.343 26.861 90.742 1.00 81.97 C
ATOM 10 O3' U B 38 88.082 28.143 91.349 1.00 80.68 O
ATOM 11 C2' U B 38 88.489 25.695 91.738 1.00 82.29 C
ATOM 12 O2' U B 38 87.820 25.936 92.956 1.00 84.40 O
ATOM 13 C1' U B 38 87.717 24.566 91.036 1.00 82.53 C
ATOM 14 N1 U B 38 88.316 23.241 90.784 1.00 82.95 N
ATOM 15 C2 U B 38 88.805 22.520 91.868 1.00 83.32 C
ATOM 16 O2 U B 38 88.831 22.959 93.007 1.00 84.68 O
ATOM 17 N3 U B 38 89.268 21.261 91.567 1.00 82.05 N
ATOM 18 C4 U B 38 89.306 20.662 90.328 1.00 81.13 C
ATOM 19 O4 U B 38 89.725 19.511 90.229 1.00 80.66 O
ATOM 20 C5 U B 38 88.818 21.471 89.259 1.00 81.53 C
ATOM 21 C6 U B 38 88.358 22.703 89.513 1.00 82.67 C
ATOM 22 P C B 39 89.144 28.837 92.339 1.00 80.23 P
ATOM 23 OP1 C B 39 89.421 27.896 93.438 1.00 81.78 O
ATOM 24 OP2 C B 39 88.602 30.180 92.653 1.00 80.26 O
ATOM 25 O5' C B 39 90.483 29.027 91.492 1.00 82.46 O
TER

Atoms:
OP1: (85.925,17.114,98.048)
OP2: (83.658,15.908,97.878)
C3': (82.163,20.544,99.155)
C1': (84.032,21.963,99.293)
C5': (83.540,18.460,99.677)
O4': (84.392,20.714,99.862)
C8: (85.151,21.003,97.205)
O2': (82.016,22.613,100.467)
C6: (85.529,23.713,94.996)
C5: (85.321,22.736,95.987)
C4: (84.739,23.156,97.171)
P: (84.499,17.101,97.615)
C4': (83.210,19.890,100.043)
C2': (82.502,22.022,99.275)
C2: (84.599,25.237,96.470)
N1: (85.148,24.980,95.273)
N3: (84.353,24.406,97.481)
N6: (86.076,23.456,93.804)
N7: (85.581,21.372,96.024)
N9: (84.621,22.031,97.951)
O5': (83.778,18.364,98.260)
O3': (80.839,20.228,99.549)
C4: (89.306,20.662,90.328)
N3: (89.268,21.261,91.567)
OP1: (86.576,26.507,85.427)
OP2: (87.907,24.463,86.219)
C2: (88.805,22.520,91.868)
C1': (87.717,24.566,91.036)
C3': (88.343,26.861,90.742)
O5': (87.680,26.468,87.674)
O4': (87.184,25.085,89.844)
C5': (86.866,27.135,88.642)
P: (87.008,25.604,86.520)
C4': (87.060,26.510,90.002)
C2': (88.489,25.695,91.738)
O2': (87.820,25.936,92.956)
N1: (88.316,23.241,90.784)
O4: (89.725,19.511,90.229)
O2: (88.831,22.959,93.007)
C6: (88.358,22.703,89.513)
C5: (88.818,21.471,89.259)
O3': (88.082,28.143,91.349)
Image (generated by PyMOL):
PyMOL image
show in jmol