ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02129:02373

Extra

PDB:
ATOM 1 O3' U A2128 69.956 93.998 95.578 1.00 52.54 O
ATOM 2 P G A2129 69.265 93.341 96.863 1.00 52.71 P
ATOM 3 OP1 G A2129 70.329 93.194 97.891 1.00 53.73 O
ATOM 4 OP2 G A2129 68.498 92.144 96.426 1.00 55.16 O
ATOM 5 O5' G A2129 68.241 94.454 97.351 1.00 51.63 O
ATOM 6 C5' G A2129 68.707 95.559 98.131 1.00 51.80 C
ATOM 7 C4' G A2129 67.676 96.660 98.166 1.00 51.69 C
ATOM 8 O4' G A2129 66.411 96.157 98.701 1.00 52.04 O
ATOM 9 C3' G A2129 68.084 97.806 99.077 1.00 50.65 C
ATOM 10 O3' G A2129 67.520 99.005 98.580 1.00 51.63 O
ATOM 11 C2' G A2129 67.423 97.421 100.394 1.00 51.28 C
ATOM 12 O2' G A2129 67.221 98.522 101.255 1.00 52.76 O
ATOM 13 C1' G A2129 66.095 96.850 99.895 1.00 50.33 C
ATOM 14 N9 G A2129 65.459 95.930 100.836 1.00 50.35 N
ATOM 15 C8 G A2129 64.502 96.265 101.765 1.00 49.89 C
ATOM 16 N7 G A2129 64.137 95.260 102.511 1.00 51.29 N
ATOM 17 C5 G A2129 64.890 94.187 102.044 1.00 51.18 C
ATOM 18 C6 G A2129 64.937 92.832 102.487 1.00 51.28 C
ATOM 19 O6 G A2129 64.327 92.309 103.428 1.00 50.70 O
ATOM 20 N1 G A2129 65.820 92.072 101.723 1.00 50.31 N
ATOM 21 C2 G A2129 66.579 92.553 100.684 1.00 49.34 C
ATOM 22 N2 G A2129 67.373 91.658 100.072 1.00 44.91 N
ATOM 23 N3 G A2129 66.563 93.818 100.277 1.00 49.55 N
ATOM 24 C4 G A2129 65.699 94.574 100.997 1.00 50.23 C
ATOM 25 P G A2130 68.404 100.342 98.519 1.00 51.99 P
ATOM 26 OP1 G A2130 69.745 100.079 99.108 1.00 50.03 O
ATOM 27 OP2 G A2130 67.553 101.427 99.075 1.00 49.00 O
ATOM 28 O5' G A2130 68.584 100.595 96.956 1.00 50.13 O
TER

ATOM 1 O3' U B2372 62.225 98.951 102.474 1.00 43.65 O
ATOM 2 P A B2373 62.527 99.293 100.928 1.00 43.44 P
ATOM 3 OP1 A B2373 62.151 98.090 100.146 1.00 46.97 O
ATOM 4 OP2 A B2373 63.893 99.851 100.793 1.00 44.49 O
ATOM 5 O5' A B2373 61.479 100.428 100.575 1.00 42.62 O
ATOM 6 C5' A B2373 60.126 100.338 101.039 1.00 45.03 C
ATOM 7 C4' A B2373 59.470 101.694 100.980 1.00 45.54 C
ATOM 8 O4' A B2373 60.271 102.642 101.736 1.00 45.41 O
ATOM 9 C3' A B2373 59.329 102.287 99.587 1.00 45.39 C
ATOM 10 O3' A B2373 58.147 103.086 99.544 1.00 46.98 O
ATOM 11 C2' A B2373 60.623 103.079 99.436 1.00 46.88 C
ATOM 12 O2' A B2373 60.550 104.127 98.493 1.00 46.85 O
ATOM 13 C1' A B2373 60.853 103.593 100.862 1.00 45.88 C
ATOM 14 N9 A B2373 62.269 103.707 101.225 1.00 46.35 N
ATOM 15 C8 A B2373 63.292 102.844 100.907 1.00 46.71 C
ATOM 16 N7 A B2373 64.455 103.204 101.384 1.00 47.45 N
ATOM 17 C5 A B2373 64.185 104.384 102.064 1.00 47.86 C
ATOM 18 C6 A B2373 65.007 105.270 102.790 1.00 48.20 C
ATOM 19 N6 A B2373 66.321 105.097 102.959 1.00 48.43 N
ATOM 20 N1 A B2373 64.425 106.353 103.340 1.00 48.93 N
ATOM 21 C2 A B2373 63.112 106.527 103.168 1.00 50.61 C
ATOM 22 N3 A B2373 62.238 105.771 102.511 1.00 49.81 N
ATOM 23 C4 A B2373 62.844 104.704 101.974 1.00 46.76 C
ATOM 24 P C B2374 57.003 102.741 98.470 1.00 47.04 P
ATOM 25 OP1 C B2374 57.237 101.346 97.996 1.00 46.62 O
ATOM 26 OP2 C B2374 56.929 103.863 97.489 1.00 49.39 O
ATOM 27 O5' C B2374 55.608 102.719 99.239 1.00 45.34 O
TER

Atoms:
OP1: (70.329,93.194,97.891)
OP2: (68.498,92.144,96.426)
C3': (68.084,97.806,99.077)
C1': (66.095,96.850,99.895)
C5': (68.707,95.559,98.131)
O6: (64.327,92.309,103.428)
O4': (66.411,96.157,98.701)
C8: (64.502,96.265,101.765)
C2: (66.579,92.553,100.684)
C6: (64.937,92.832,102.487)
C5: (64.890,94.187,102.044)
C4: (65.699,94.574,100.997)
P: (69.265,93.341,96.863)
C4': (67.676,96.660,98.166)
C2': (67.423,97.421,100.394)
O2': (67.221,98.522,101.255)
N1: (65.820,92.072,101.723)
N2: (67.373,91.658,100.072)
N3: (66.563,93.818,100.277)
N7: (64.137,95.260,102.511)
N9: (65.459,95.930,100.836)
O5': (68.241,94.454,97.351)
O3': (67.520,99.005,98.580)
OP1: (62.151,98.090,100.146)
OP2: (63.893,99.851,100.793)
C3': (59.329,102.287,99.587)
C1': (60.853,103.593,100.862)
C5': (60.126,100.338,101.039)
O4': (60.271,102.642,101.736)
C8: (63.292,102.844,100.907)
O2': (60.550,104.127,98.493)
C6: (65.007,105.270,102.790)
C5: (64.185,104.384,102.064)
C4: (62.844,104.704,101.974)
P: (62.527,99.293,100.928)
C4': (59.470,101.694,100.980)
C2': (60.623,103.079,99.436)
C2: (63.112,106.527,103.168)
N1: (64.425,106.353,103.340)
N3: (62.238,105.771,102.511)
N6: (66.321,105.097,102.959)
N7: (64.455,103.204,101.384)
N9: (62.269,103.707,101.225)
O5': (61.479,100.428,100.575)
O3': (58.147,103.086,99.544)
Image (generated by PyMOL):
PyMOL image
show in jmol