ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01031:01029

Extra

PDB:
ATOM 1 O3' G A1030 34.768 99.928 89.761 1.00 32.50 O
ATOM 2 P G A1031 33.687 101.109 89.725 1.00 34.11 P
ATOM 3 OP1 G A1031 32.936 100.916 88.468 1.00 32.22 O
ATOM 4 OP2 G A1031 34.365 102.416 89.995 1.00 32.05 O
ATOM 5 O5' G A1031 32.750 100.793 90.969 1.00 35.55 O
ATOM 6 C5' G A1031 33.301 100.687 92.282 1.00 32.85 C
ATOM 7 C4' G A1031 32.250 100.211 93.244 1.00 36.98 C
ATOM 8 O4' G A1031 31.775 98.888 92.845 1.00 33.61 O
ATOM 9 C3' G A1031 32.739 100.069 94.684 1.00 35.87 C
ATOM 10 O3' G A1031 31.665 100.352 95.556 1.00 35.61 O
ATOM 11 C2' G A1031 33.089 98.592 94.766 1.00 35.29 C
ATOM 12 O2' G A1031 33.066 98.099 96.083 1.00 35.61 O
ATOM 13 C1' G A1031 31.972 97.988 93.915 1.00 34.59 C
ATOM 14 N9 G A1031 32.254 96.667 93.374 1.00 32.62 N
ATOM 15 C8 G A1031 33.477 96.111 93.113 1.00 31.15 C
ATOM 16 N7 G A1031 33.396 94.889 92.664 1.00 33.88 N
ATOM 17 C5 G A1031 32.034 94.630 92.613 1.00 32.87 C
ATOM 18 C6 G A1031 31.334 93.469 92.210 1.00 32.86 C
ATOM 19 O6 G A1031 31.791 92.392 91.800 1.00 33.80 O
ATOM 20 N1 G A1031 29.962 93.635 92.326 1.00 31.43 N
ATOM 21 C2 G A1031 29.338 94.763 92.773 1.00 33.31 C
ATOM 22 N2 G A1031 27.998 94.717 92.823 1.00 32.60 N
ATOM 23 N3 G A1031 29.975 95.855 93.150 1.00 35.14 N
ATOM 24 C4 G A1031 31.315 95.717 93.044 1.00 34.75 C
ATOM 25 P A A1032 31.860 101.398 96.743 1.00 39.37 P
ATOM 26 OP1 A A1032 33.041 102.248 96.449 1.00 44.89 O
ATOM 27 OP2 A A1032 31.810 100.642 98.011 1.00 43.74 O
ATOM 28 O5' A A1032 30.559 102.313 96.656 1.00 38.51 O
TER

ATOM 1 O3' C B1028 37.527 99.403 95.554 1.00 37.20 O
ATOM 2 P A B1029 37.139 99.787 94.047 1.00 38.01 P
ATOM 3 OP1 A B1029 36.478 101.119 94.084 1.00 36.26 O
ATOM 4 OP2 A B1029 36.429 98.630 93.461 1.00 36.40 O
ATOM 5 O5' A B1029 38.534 99.862 93.277 1.00 36.74 O
ATOM 6 C5' A B1029 39.573 100.793 93.643 1.00 34.19 C
ATOM 7 C4' A B1029 40.847 100.448 92.899 1.00 35.13 C
ATOM 8 O4' A B1029 41.302 99.133 93.310 1.00 34.15 O
ATOM 9 C3' A B1029 40.677 100.344 91.390 1.00 34.33 C
ATOM 10 O3' A B1029 40.868 101.616 90.803 1.00 34.75 O
ATOM 11 C2' A B1029 41.758 99.352 90.981 1.00 34.22 C
ATOM 12 O2' A B1029 43.023 99.959 90.828 1.00 35.98 O
ATOM 13 C1' A B1029 41.773 98.405 92.184 1.00 34.72 C
ATOM 14 N9 A B1029 40.915 97.233 92.016 1.00 34.14 N
ATOM 15 C8 A B1029 39.582 97.142 92.310 1.00 33.33 C
ATOM 16 N7 A B1029 39.062 95.974 92.036 1.00 35.00 N
ATOM 17 C5 A B1029 40.124 95.244 91.534 1.00 32.95 C
ATOM 18 C6 A B1029 40.215 93.936 91.059 1.00 33.79 C
ATOM 19 N6 A B1029 39.179 93.096 91.019 1.00 33.44 N
ATOM 20 N1 A B1029 41.417 93.507 90.621 1.00 34.72 N
ATOM 21 C2 A B1029 42.456 94.350 90.672 1.00 35.93 C
ATOM 22 N3 A B1029 42.494 95.605 91.105 1.00 37.52 N
ATOM 23 C4 A B1029 41.275 96.000 91.523 1.00 34.70 C
ATOM 24 P G B1030 40.236 101.936 89.369 1.00 35.06 P
ATOM 25 OP1 G B1030 40.992 101.147 88.363 1.00 29.64 O
ATOM 26 OP2 G B1030 40.140 103.411 89.231 1.00 35.01 O
ATOM 27 O5' G B1030 38.761 101.352 89.479 1.00 37.13 O
TER

Atoms:
OP1: (32.936,100.916,88.468)
OP2: (34.365,102.416,89.995)
C3': (32.739,100.069,94.684)
C1': (31.972,97.988,93.915)
C5': (33.301,100.687,92.282)
O6: (31.791,92.392,91.800)
O4': (31.775,98.888,92.845)
C8: (33.477,96.111,93.113)
C2: (29.338,94.763,92.773)
C6: (31.334,93.469,92.210)
C5: (32.034,94.630,92.613)
C4: (31.315,95.717,93.044)
P: (33.687,101.109,89.725)
C4': (32.250,100.211,93.244)
C2': (33.089,98.592,94.766)
O2': (33.066,98.099,96.083)
N1: (29.962,93.635,92.326)
N2: (27.998,94.717,92.823)
N3: (29.975,95.855,93.150)
N7: (33.396,94.889,92.664)
N9: (32.254,96.667,93.374)
O5': (32.750,100.793,90.969)
O3': (31.665,100.352,95.556)
OP1: (36.478,101.119,94.084)
OP2: (36.429,98.630,93.461)
C3': (40.677,100.344,91.390)
C1': (41.773,98.405,92.184)
C5': (39.573,100.793,93.643)
O4': (41.302,99.133,93.310)
C8: (39.582,97.142,92.310)
O2': (43.023,99.959,90.828)
C6: (40.215,93.936,91.059)
C5: (40.124,95.244,91.534)
C4: (41.275,96.000,91.523)
P: (37.139,99.787,94.047)
C4': (40.847,100.448,92.899)
C2': (41.758,99.352,90.981)
C2: (42.456,94.350,90.672)
N1: (41.417,93.507,90.621)
N3: (42.494,95.605,91.105)
N6: (39.179,93.096,91.019)
N7: (39.062,95.974,92.036)
N9: (40.915,97.233,92.016)
O5': (38.534,99.862,93.277)
O3': (40.868,101.616,90.803)
Image (generated by PyMOL):
PyMOL image
show in jmol