Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01931:01942
Extra
PDB:
ATOM 1 O3' U A1930 91.759 117.628 115.962 1.00 40.95 O
ATOM 2 P U A1931 90.477 118.448 116.470 1.00 42.73 P
ATOM 3 OP1 U A1931 89.622 117.569 117.307 1.00 41.47 O
ATOM 4 OP2 U A1931 89.895 119.131 115.281 1.00 42.74 O
ATOM 5 O5' U A1931 91.106 119.554 117.422 1.00 41.82 O
ATOM 6 C5' U A1931 92.093 120.470 116.920 1.00 40.18 C
ATOM 7 C4' U A1931 92.918 121.019 118.055 1.00 40.41 C
ATOM 8 O4' U A1931 92.072 121.810 118.931 1.00 39.78 O
ATOM 9 C3' U A1931 93.607 119.996 118.952 1.00 39.76 C
ATOM 10 O3' U A1931 94.818 120.576 119.411 1.00 40.35 O
ATOM 11 C2' U A1931 92.639 119.872 120.121 1.00 38.57 C
ATOM 12 O2' U A1931 93.303 119.465 121.299 1.00 40.19 O
ATOM 13 C1' U A1931 92.161 121.316 120.248 1.00 36.98 C
ATOM 14 N1 U A1931 90.859 121.528 120.889 1.00 35.33 N
ATOM 15 C2 U A1931 90.823 122.372 121.977 1.00 35.73 C
ATOM 16 O2 U A1931 91.817 122.882 122.448 1.00 37.46 O
ATOM 17 N3 U A1931 89.574 122.602 122.494 1.00 35.90 N
ATOM 18 C4 U A1931 88.381 122.076 122.045 1.00 35.47 C
ATOM 19 O4 U A1931 87.329 122.474 122.538 1.00 35.78 O
ATOM 20 C5 U A1931 88.504 121.178 120.937 1.00 35.07 C
ATOM 21 C6 U A1931 89.710 120.939 120.410 1.00 36.15 C
ATOM 22 P G A1932 96.201 120.199 118.696 1.00 44.45 P
ATOM 23 OP1 G A1932 97.074 121.397 118.747 1.00 42.67 O
ATOM 24 OP2 G A1932 95.930 119.545 117.387 1.00 42.17 O
ATOM 25 O5' G A1932 96.843 119.125 119.676 1.00 45.96 O
TER
ATOM 1 O3' G B1941 93.246 128.749 122.688 1.00 36.79 O
ATOM 2 P U B1942 93.915 127.326 122.392 1.00 36.86 P
ATOM 3 OP1 U B1942 93.531 126.399 123.487 1.00 36.82 O
ATOM 4 OP2 U B1942 95.343 127.519 122.064 1.00 38.43 O
ATOM 5 O5' U B1942 93.200 126.856 121.052 1.00 39.79 O
ATOM 6 C5' U B1942 92.003 126.056 121.068 1.00 38.28 C
ATOM 7 C4' U B1942 92.035 125.101 119.905 1.00 38.75 C
ATOM 8 O4' U B1942 90.840 124.268 119.892 1.00 39.11 O
ATOM 9 C3' U B1942 92.101 125.767 118.534 1.00 36.76 C
ATOM 10 O3' U B1942 92.907 124.971 117.687 1.00 37.65 O
ATOM 11 C2' U B1942 90.661 125.687 118.050 1.00 37.05 C
ATOM 12 O2' U B1942 90.582 125.681 116.643 1.00 35.54 O
ATOM 13 C1' U B1942 90.253 124.330 118.612 1.00 38.02 C
ATOM 14 N1 U B1942 88.812 124.061 118.725 1.00 37.60 N
ATOM 15 C2 U B1942 88.320 122.979 118.017 1.00 36.48 C
ATOM 16 O2 U B1942 89.022 122.269 117.323 1.00 35.95 O
ATOM 17 N3 U B1942 86.977 122.758 118.153 1.00 37.31 N
ATOM 18 C4 U B1942 86.092 123.486 118.908 1.00 39.36 C
ATOM 19 O4 U B1942 84.915 123.134 118.953 1.00 41.41 O
ATOM 20 C5 U B1942 86.670 124.594 119.610 1.00 39.25 C
ATOM 21 C6 U B1942 87.980 124.837 119.497 1.00 37.96 C
ATOM 22 P A B1943 94.339 125.516 117.218 1.00 39.10 P
ATOM 23 OP1 A B1943 94.709 124.775 115.983 1.00 39.41 O
ATOM 24 OP2 A B1943 95.248 125.492 118.383 1.00 39.81 O
ATOM 25 O5' A B1943 94.053 127.035 116.833 1.00 38.44 O
TER
ATOM 2 P U A1931 90.477 118.448 116.470 1.00 42.73 P
ATOM 3 OP1 U A1931 89.622 117.569 117.307 1.00 41.47 O
ATOM 4 OP2 U A1931 89.895 119.131 115.281 1.00 42.74 O
ATOM 5 O5' U A1931 91.106 119.554 117.422 1.00 41.82 O
ATOM 6 C5' U A1931 92.093 120.470 116.920 1.00 40.18 C
ATOM 7 C4' U A1931 92.918 121.019 118.055 1.00 40.41 C
ATOM 8 O4' U A1931 92.072 121.810 118.931 1.00 39.78 O
ATOM 9 C3' U A1931 93.607 119.996 118.952 1.00 39.76 C
ATOM 10 O3' U A1931 94.818 120.576 119.411 1.00 40.35 O
ATOM 11 C2' U A1931 92.639 119.872 120.121 1.00 38.57 C
ATOM 12 O2' U A1931 93.303 119.465 121.299 1.00 40.19 O
ATOM 13 C1' U A1931 92.161 121.316 120.248 1.00 36.98 C
ATOM 14 N1 U A1931 90.859 121.528 120.889 1.00 35.33 N
ATOM 15 C2 U A1931 90.823 122.372 121.977 1.00 35.73 C
ATOM 16 O2 U A1931 91.817 122.882 122.448 1.00 37.46 O
ATOM 17 N3 U A1931 89.574 122.602 122.494 1.00 35.90 N
ATOM 18 C4 U A1931 88.381 122.076 122.045 1.00 35.47 C
ATOM 19 O4 U A1931 87.329 122.474 122.538 1.00 35.78 O
ATOM 20 C5 U A1931 88.504 121.178 120.937 1.00 35.07 C
ATOM 21 C6 U A1931 89.710 120.939 120.410 1.00 36.15 C
ATOM 22 P G A1932 96.201 120.199 118.696 1.00 44.45 P
ATOM 23 OP1 G A1932 97.074 121.397 118.747 1.00 42.67 O
ATOM 24 OP2 G A1932 95.930 119.545 117.387 1.00 42.17 O
ATOM 25 O5' G A1932 96.843 119.125 119.676 1.00 45.96 O
TER
ATOM 1 O3' G B1941 93.246 128.749 122.688 1.00 36.79 O
ATOM 2 P U B1942 93.915 127.326 122.392 1.00 36.86 P
ATOM 3 OP1 U B1942 93.531 126.399 123.487 1.00 36.82 O
ATOM 4 OP2 U B1942 95.343 127.519 122.064 1.00 38.43 O
ATOM 5 O5' U B1942 93.200 126.856 121.052 1.00 39.79 O
ATOM 6 C5' U B1942 92.003 126.056 121.068 1.00 38.28 C
ATOM 7 C4' U B1942 92.035 125.101 119.905 1.00 38.75 C
ATOM 8 O4' U B1942 90.840 124.268 119.892 1.00 39.11 O
ATOM 9 C3' U B1942 92.101 125.767 118.534 1.00 36.76 C
ATOM 10 O3' U B1942 92.907 124.971 117.687 1.00 37.65 O
ATOM 11 C2' U B1942 90.661 125.687 118.050 1.00 37.05 C
ATOM 12 O2' U B1942 90.582 125.681 116.643 1.00 35.54 O
ATOM 13 C1' U B1942 90.253 124.330 118.612 1.00 38.02 C
ATOM 14 N1 U B1942 88.812 124.061 118.725 1.00 37.60 N
ATOM 15 C2 U B1942 88.320 122.979 118.017 1.00 36.48 C
ATOM 16 O2 U B1942 89.022 122.269 117.323 1.00 35.95 O
ATOM 17 N3 U B1942 86.977 122.758 118.153 1.00 37.31 N
ATOM 18 C4 U B1942 86.092 123.486 118.908 1.00 39.36 C
ATOM 19 O4 U B1942 84.915 123.134 118.953 1.00 41.41 O
ATOM 20 C5 U B1942 86.670 124.594 119.610 1.00 39.25 C
ATOM 21 C6 U B1942 87.980 124.837 119.497 1.00 37.96 C
ATOM 22 P A B1943 94.339 125.516 117.218 1.00 39.10 P
ATOM 23 OP1 A B1943 94.709 124.775 115.983 1.00 39.41 O
ATOM 24 OP2 A B1943 95.248 125.492 118.383 1.00 39.81 O
ATOM 25 O5' A B1943 94.053 127.035 116.833 1.00 38.44 O
TER
Atoms:
C4: (88.381,122.076,122.045)
N3: (89.574,122.602,122.494)
OP1: (89.622,117.569,117.307)
OP2: (89.895,119.131,115.281)
C2: (90.823,122.372,121.977)
C1': (92.161,121.316,120.248)
C3': (93.607,119.996,118.952)
O5': (91.106,119.554,117.422)
O4': (92.072,121.810,118.931)
C5': (92.093,120.470,116.920)
P: (90.477,118.448,116.470)
C4': (92.918,121.019,118.055)
C2': (92.639,119.872,120.121)
O2': (93.303,119.465,121.299)
N1: (90.859,121.528,120.889)
O4: (87.329,122.474,122.538)
O2: (91.817,122.882,122.448)
C6: (89.710,120.939,120.410)
C5: (88.504,121.178,120.937)
O3': (94.818,120.576,119.411)
N3: (89.574,122.602,122.494)
OP1: (89.622,117.569,117.307)
OP2: (89.895,119.131,115.281)
C2: (90.823,122.372,121.977)
C1': (92.161,121.316,120.248)
C3': (93.607,119.996,118.952)
O5': (91.106,119.554,117.422)
O4': (92.072,121.810,118.931)
C5': (92.093,120.470,116.920)
P: (90.477,118.448,116.470)
C4': (92.918,121.019,118.055)
C2': (92.639,119.872,120.121)
O2': (93.303,119.465,121.299)
N1: (90.859,121.528,120.889)
O4: (87.329,122.474,122.538)
O2: (91.817,122.882,122.448)
C6: (89.710,120.939,120.410)
C5: (88.504,121.178,120.937)
O3': (94.818,120.576,119.411)
C4: (86.092,123.486,118.908)
N3: (86.977,122.758,118.153)
OP1: (93.531,126.399,123.487)
OP2: (95.343,127.519,122.064)
C2: (88.320,122.979,118.017)
C1': (90.253,124.330,118.612)
C3': (92.101,125.767,118.534)
O5': (93.200,126.856,121.052)
O4': (90.840,124.268,119.892)
C5': (92.003,126.056,121.068)
P: (93.915,127.326,122.392)
C4': (92.035,125.101,119.905)
C2': (90.661,125.687,118.050)
O2': (90.582,125.681,116.643)
N1: (88.812,124.061,118.725)
O4: (84.915,123.134,118.953)
O2: (89.022,122.269,117.323)
C6: (87.980,124.837,119.497)
C5: (86.670,124.594,119.610)
O3': (92.907,124.971,117.687)
N3: (86.977,122.758,118.153)
OP1: (93.531,126.399,123.487)
OP2: (95.343,127.519,122.064)
C2: (88.320,122.979,118.017)
C1': (90.253,124.330,118.612)
C3': (92.101,125.767,118.534)
O5': (93.200,126.856,121.052)
O4': (90.840,124.268,119.892)
C5': (92.003,126.056,121.068)
P: (93.915,127.326,122.392)
C4': (92.035,125.101,119.905)
C2': (90.661,125.687,118.050)
O2': (90.582,125.681,116.643)
N1: (88.812,124.061,118.725)
O4: (84.915,123.134,118.953)
O2: (89.022,122.269,117.323)
C6: (87.980,124.837,119.497)
C5: (86.670,124.594,119.610)
O3': (92.907,124.971,117.687)
Image (generated by PyMOL):