Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02565:02588
Extra
PDB:
ATOM 1 O3' G A2564 69.007 171.605 117.351 1.00 41.41 O
ATOM 2 P U A2565 69.737 173.025 117.207 1.00 39.69 P
ATOM 3 OP1 U A2565 71.118 172.839 117.703 1.00 39.92 O
ATOM 4 OP2 U A2565 68.863 174.038 117.838 1.00 42.97 O
ATOM 5 O5' U A2565 69.760 173.322 115.642 1.00 41.34 O
ATOM 6 C5' U A2565 70.624 172.595 114.765 1.00 40.18 C
ATOM 7 C4' U A2565 70.397 173.010 113.331 1.00 41.28 C
ATOM 8 O4' U A2565 71.354 172.299 112.517 1.00 43.02 O
ATOM 9 C3' U A2565 69.011 172.713 112.763 1.00 43.33 C
ATOM 10 O3' U A2565 68.275 173.944 112.711 1.00 43.97 O
ATOM 11 C2' U A2565 69.288 172.263 111.328 1.00 43.95 C
ATOM 12 O2' U A2565 69.365 173.352 110.434 1.00 48.28 O
ATOM 13 C1' U A2565 70.701 171.692 111.430 1.00 43.89 C
ATOM 14 N1 U A2565 70.917 170.237 111.498 1.00 45.21 N
ATOM 15 C2 U A2565 71.662 169.672 110.467 1.00 46.91 C
ATOM 16 O2 U A2565 72.070 170.307 109.519 1.00 53.13 O
ATOM 17 N3 U A2565 71.914 168.338 110.582 1.00 43.87 N
ATOM 18 C4 U A2565 71.509 167.517 111.583 1.00 46.03 C
ATOM 19 O4 U A2565 71.876 166.346 111.560 1.00 49.27 O
ATOM 20 C5 U A2565 70.712 168.152 112.610 1.00 45.44 C
ATOM 21 C6 U A2565 70.448 169.462 112.529 1.00 41.98 C
ATOM 22 P A A2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 23 OP1 A A2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 24 OP2 A A2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 25 O5' A A2566 66.816 174.408 114.712 1.00 45.38 O
TER
ATOM 1 O3' G B2587 71.350 171.870 105.504 1.00 57.28 O
ATOM 2 P U B2588 71.135 172.738 106.837 1.00 56.21 P
ATOM 3 OP1 U B2588 69.784 172.425 107.387 1.00 54.95 O
ATOM 4 OP2 U B2588 71.503 174.150 106.542 1.00 56.85 O
ATOM 5 O5' U B2588 72.190 172.130 107.864 1.00 54.49 O
ATOM 6 C5' U B2588 73.602 172.350 107.715 1.00 50.62 C
ATOM 7 C4' U B2588 74.001 173.577 108.492 1.00 49.77 C
ATOM 8 O4' U B2588 73.535 173.449 109.862 1.00 49.26 O
ATOM 9 C3' U B2588 75.486 173.896 108.567 1.00 49.67 C
ATOM 10 O3' U B2588 75.659 175.297 108.451 1.00 48.56 O
ATOM 11 C2' U B2588 75.881 173.385 109.952 1.00 48.56 C
ATOM 12 O2' U B2588 76.969 174.086 110.522 1.00 46.07 O
ATOM 13 C1' U B2588 74.609 173.644 110.754 1.00 47.38 C
ATOM 14 N1 U B2588 74.427 172.721 111.883 1.00 45.86 N
ATOM 15 C2 U B2588 74.155 173.265 113.127 1.00 46.98 C
ATOM 16 O2 U B2588 74.067 174.469 113.329 1.00 49.27 O
ATOM 17 N3 U B2588 73.981 172.346 114.132 1.00 46.58 N
ATOM 18 C4 U B2588 74.042 170.973 114.020 1.00 45.50 C
ATOM 19 O4 U B2588 73.784 170.277 114.999 1.00 45.80 O
ATOM 20 C5 U B2588 74.336 170.493 112.708 1.00 44.97 C
ATOM 21 C6 U B2588 74.514 171.360 111.710 1.00 44.26 C
ATOM 22 P G B2589 76.495 175.882 107.213 1.00 49.19 P
ATOM 23 OP1 G B2589 76.736 177.320 107.489 1.00 50.95 O
ATOM 24 OP2 G B2589 75.825 175.483 105.950 1.00 51.76 O
ATOM 25 O5' G B2589 77.888 175.123 107.321 1.00 47.52 O
TER
ATOM 2 P U A2565 69.737 173.025 117.207 1.00 39.69 P
ATOM 3 OP1 U A2565 71.118 172.839 117.703 1.00 39.92 O
ATOM 4 OP2 U A2565 68.863 174.038 117.838 1.00 42.97 O
ATOM 5 O5' U A2565 69.760 173.322 115.642 1.00 41.34 O
ATOM 6 C5' U A2565 70.624 172.595 114.765 1.00 40.18 C
ATOM 7 C4' U A2565 70.397 173.010 113.331 1.00 41.28 C
ATOM 8 O4' U A2565 71.354 172.299 112.517 1.00 43.02 O
ATOM 9 C3' U A2565 69.011 172.713 112.763 1.00 43.33 C
ATOM 10 O3' U A2565 68.275 173.944 112.711 1.00 43.97 O
ATOM 11 C2' U A2565 69.288 172.263 111.328 1.00 43.95 C
ATOM 12 O2' U A2565 69.365 173.352 110.434 1.00 48.28 O
ATOM 13 C1' U A2565 70.701 171.692 111.430 1.00 43.89 C
ATOM 14 N1 U A2565 70.917 170.237 111.498 1.00 45.21 N
ATOM 15 C2 U A2565 71.662 169.672 110.467 1.00 46.91 C
ATOM 16 O2 U A2565 72.070 170.307 109.519 1.00 53.13 O
ATOM 17 N3 U A2565 71.914 168.338 110.582 1.00 43.87 N
ATOM 18 C4 U A2565 71.509 167.517 111.583 1.00 46.03 C
ATOM 19 O4 U A2565 71.876 166.346 111.560 1.00 49.27 O
ATOM 20 C5 U A2565 70.712 168.152 112.610 1.00 45.44 C
ATOM 21 C6 U A2565 70.448 169.462 112.529 1.00 41.98 C
ATOM 22 P A A2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 23 OP1 A A2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 24 OP2 A A2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 25 O5' A A2566 66.816 174.408 114.712 1.00 45.38 O
TER
ATOM 1 O3' G B2587 71.350 171.870 105.504 1.00 57.28 O
ATOM 2 P U B2588 71.135 172.738 106.837 1.00 56.21 P
ATOM 3 OP1 U B2588 69.784 172.425 107.387 1.00 54.95 O
ATOM 4 OP2 U B2588 71.503 174.150 106.542 1.00 56.85 O
ATOM 5 O5' U B2588 72.190 172.130 107.864 1.00 54.49 O
ATOM 6 C5' U B2588 73.602 172.350 107.715 1.00 50.62 C
ATOM 7 C4' U B2588 74.001 173.577 108.492 1.00 49.77 C
ATOM 8 O4' U B2588 73.535 173.449 109.862 1.00 49.26 O
ATOM 9 C3' U B2588 75.486 173.896 108.567 1.00 49.67 C
ATOM 10 O3' U B2588 75.659 175.297 108.451 1.00 48.56 O
ATOM 11 C2' U B2588 75.881 173.385 109.952 1.00 48.56 C
ATOM 12 O2' U B2588 76.969 174.086 110.522 1.00 46.07 O
ATOM 13 C1' U B2588 74.609 173.644 110.754 1.00 47.38 C
ATOM 14 N1 U B2588 74.427 172.721 111.883 1.00 45.86 N
ATOM 15 C2 U B2588 74.155 173.265 113.127 1.00 46.98 C
ATOM 16 O2 U B2588 74.067 174.469 113.329 1.00 49.27 O
ATOM 17 N3 U B2588 73.981 172.346 114.132 1.00 46.58 N
ATOM 18 C4 U B2588 74.042 170.973 114.020 1.00 45.50 C
ATOM 19 O4 U B2588 73.784 170.277 114.999 1.00 45.80 O
ATOM 20 C5 U B2588 74.336 170.493 112.708 1.00 44.97 C
ATOM 21 C6 U B2588 74.514 171.360 111.710 1.00 44.26 C
ATOM 22 P G B2589 76.495 175.882 107.213 1.00 49.19 P
ATOM 23 OP1 G B2589 76.736 177.320 107.489 1.00 50.95 O
ATOM 24 OP2 G B2589 75.825 175.483 105.950 1.00 51.76 O
ATOM 25 O5' G B2589 77.888 175.123 107.321 1.00 47.52 O
TER
Atoms:
C4: (71.509,167.517,111.583)
N3: (71.914,168.338,110.582)
OP1: (71.118,172.839,117.703)
OP2: (68.863,174.038,117.838)
C2: (71.662,169.672,110.467)
C1': (70.701,171.692,111.430)
C3': (69.011,172.713,112.763)
O5': (69.760,173.322,115.642)
O4': (71.354,172.299,112.517)
C5': (70.624,172.595,114.765)
P: (69.737,173.025,117.207)
C4': (70.397,173.010,113.331)
C2': (69.288,172.263,111.328)
O2': (69.365,173.352,110.434)
N1: (70.917,170.237,111.498)
O4: (71.876,166.346,111.560)
O2: (72.070,170.307,109.519)
C6: (70.448,169.462,112.529)
C5: (70.712,168.152,112.610)
O3': (68.275,173.944,112.711)
N3: (71.914,168.338,110.582)
OP1: (71.118,172.839,117.703)
OP2: (68.863,174.038,117.838)
C2: (71.662,169.672,110.467)
C1': (70.701,171.692,111.430)
C3': (69.011,172.713,112.763)
O5': (69.760,173.322,115.642)
O4': (71.354,172.299,112.517)
C5': (70.624,172.595,114.765)
P: (69.737,173.025,117.207)
C4': (70.397,173.010,113.331)
C2': (69.288,172.263,111.328)
O2': (69.365,173.352,110.434)
N1: (70.917,170.237,111.498)
O4: (71.876,166.346,111.560)
O2: (72.070,170.307,109.519)
C6: (70.448,169.462,112.529)
C5: (70.712,168.152,112.610)
O3': (68.275,173.944,112.711)
C4: (74.042,170.973,114.020)
N3: (73.981,172.346,114.132)
OP1: (69.784,172.425,107.387)
OP2: (71.503,174.150,106.542)
C2: (74.155,173.265,113.127)
C1': (74.609,173.644,110.754)
C3': (75.486,173.896,108.567)
O5': (72.190,172.130,107.864)
O4': (73.535,173.449,109.862)
C5': (73.602,172.350,107.715)
P: (71.135,172.738,106.837)
C4': (74.001,173.577,108.492)
C2': (75.881,173.385,109.952)
O2': (76.969,174.086,110.522)
N1: (74.427,172.721,111.883)
O4: (73.784,170.277,114.999)
O2: (74.067,174.469,113.329)
C6: (74.514,171.360,111.710)
C5: (74.336,170.493,112.708)
O3': (75.659,175.297,108.451)
N3: (73.981,172.346,114.132)
OP1: (69.784,172.425,107.387)
OP2: (71.503,174.150,106.542)
C2: (74.155,173.265,113.127)
C1': (74.609,173.644,110.754)
C3': (75.486,173.896,108.567)
O5': (72.190,172.130,107.864)
O4': (73.535,173.449,109.862)
C5': (73.602,172.350,107.715)
P: (71.135,172.738,106.837)
C4': (74.001,173.577,108.492)
C2': (75.881,173.385,109.952)
O2': (76.969,174.086,110.522)
N1: (74.427,172.721,111.883)
O4: (73.784,170.277,114.999)
O2: (74.067,174.469,113.329)
C6: (74.514,171.360,111.710)
C5: (74.336,170.493,112.708)
O3': (75.659,175.297,108.451)
Image (generated by PyMOL):