ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02129:02373

Extra

PDB:
ATOM 1 O3' U A2128 69.960 93.949 95.430 1.00 48.64 O
ATOM 2 P G A2129 69.300 93.209 96.685 1.00 47.45 P
ATOM 3 OP1 G A2129 70.380 93.022 97.686 1.00 49.82 O
ATOM 4 OP2 G A2129 68.545 92.026 96.186 1.00 50.10 O
ATOM 5 O5' G A2129 68.258 94.270 97.244 1.00 47.40 O
ATOM 6 C5' G A2129 68.713 95.407 97.973 1.00 47.87 C
ATOM 7 C4' G A2129 67.667 96.497 97.970 1.00 47.72 C
ATOM 8 O4' G A2129 66.408 95.995 98.521 1.00 47.74 O
ATOM 9 C3' G A2129 68.062 97.666 98.854 1.00 46.58 C
ATOM 10 O3' G A2129 67.485 98.857 98.335 1.00 47.09 O
ATOM 11 C2' G A2129 67.431 97.282 100.186 1.00 47.65 C
ATOM 12 O2' G A2129 67.268 98.379 101.057 1.00 48.52 O
ATOM 13 C1' G A2129 66.100 96.692 99.713 1.00 46.81 C
ATOM 14 N9 G A2129 65.459 95.772 100.653 1.00 47.30 N
ATOM 15 C8 G A2129 64.489 96.099 101.570 1.00 47.85 C
ATOM 16 N7 G A2129 64.108 95.087 102.301 1.00 48.38 N
ATOM 17 C5 G A2129 64.871 94.019 101.843 1.00 48.64 C
ATOM 18 C6 G A2129 64.911 92.658 102.276 1.00 49.59 C
ATOM 19 O6 G A2129 64.281 92.122 103.203 1.00 48.52 O
ATOM 20 N1 G A2129 65.809 91.906 101.521 1.00 47.79 N
ATOM 21 C2 G A2129 66.583 92.395 100.498 1.00 48.37 C
ATOM 22 N2 G A2129 67.374 91.504 99.880 1.00 46.50 N
ATOM 23 N3 G A2129 66.579 93.666 100.105 1.00 49.09 N
ATOM 24 C4 G A2129 65.702 94.416 100.815 1.00 48.87 C
ATOM 25 P G A2130 68.341 100.216 98.306 1.00 46.17 P
ATOM 26 OP1 G A2130 69.694 99.948 98.869 1.00 47.27 O
ATOM 27 OP2 G A2130 67.485 101.278 98.901 1.00 42.19 O
ATOM 28 O5' G A2130 68.509 100.525 96.756 1.00 42.32 O
TER

ATOM 1 O3' U B2372 62.160 98.704 102.356 1.00 41.22 O
ATOM 2 P A B2373 62.449 99.031 100.804 1.00 40.36 P
ATOM 3 OP1 A B2373 62.005 97.847 100.035 1.00 45.17 O
ATOM 4 OP2 A B2373 63.833 99.530 100.637 1.00 43.06 O
ATOM 5 O5' A B2373 61.442 100.209 100.467 1.00 39.53 O
ATOM 6 C5' A B2373 60.063 100.131 100.860 1.00 37.76 C
ATOM 7 C4' A B2373 59.440 101.498 100.801 1.00 37.25 C
ATOM 8 O4' A B2373 60.252 102.416 101.586 1.00 37.03 O
ATOM 9 C3' A B2373 59.369 102.104 99.408 1.00 37.08 C
ATOM 10 O3' A B2373 58.236 102.976 99.357 1.00 40.98 O
ATOM 11 C2' A B2373 60.715 102.815 99.303 1.00 38.27 C
ATOM 12 O2' A B2373 60.795 103.840 98.339 1.00 38.13 O
ATOM 13 C1' A B2373 60.902 103.343 100.730 1.00 36.99 C
ATOM 14 N9 A B2373 62.308 103.428 101.140 1.00 37.40 N
ATOM 15 C8 A B2373 63.326 102.555 100.835 1.00 37.02 C
ATOM 16 N7 A B2373 64.485 102.899 101.334 1.00 37.76 N
ATOM 17 C5 A B2373 64.216 104.077 102.020 1.00 37.47 C
ATOM 18 C6 A B2373 65.039 104.951 102.761 1.00 37.73 C
ATOM 19 N6 A B2373 66.354 104.778 102.928 1.00 36.20 N
ATOM 20 N1 A B2373 64.459 106.029 103.323 1.00 39.38 N
ATOM 21 C2 A B2373 63.147 106.216 103.138 1.00 40.96 C
ATOM 22 N3 A B2373 62.276 105.478 102.454 1.00 40.66 N
ATOM 23 C4 A B2373 62.881 104.410 101.914 1.00 37.17 C
ATOM 24 P C B2374 57.067 102.694 98.293 1.00 41.91 P
ATOM 25 OP1 C B2374 57.278 101.328 97.734 1.00 44.35 O
ATOM 26 OP2 C B2374 56.978 103.866 97.383 1.00 44.38 O
ATOM 27 O5' C B2374 55.686 102.608 99.079 1.00 42.08 O
TER

Atoms:
OP1: (70.380,93.022,97.686)
OP2: (68.545,92.026,96.186)
C3': (68.062,97.666,98.854)
C1': (66.100,96.692,99.713)
C5': (68.713,95.407,97.973)
O6: (64.281,92.122,103.203)
O4': (66.408,95.995,98.521)
C8: (64.489,96.099,101.570)
C2: (66.583,92.395,100.498)
C6: (64.911,92.658,102.276)
C5: (64.871,94.019,101.843)
C4: (65.702,94.416,100.815)
P: (69.300,93.209,96.685)
C4': (67.667,96.497,97.970)
C2': (67.431,97.282,100.186)
O2': (67.268,98.379,101.057)
N1: (65.809,91.906,101.521)
N2: (67.374,91.504,99.880)
N3: (66.579,93.666,100.105)
N7: (64.108,95.087,102.301)
N9: (65.459,95.772,100.653)
O5': (68.258,94.270,97.244)
O3': (67.485,98.857,98.335)
OP1: (62.005,97.847,100.035)
OP2: (63.833,99.530,100.637)
C3': (59.369,102.104,99.408)
C1': (60.902,103.343,100.730)
C5': (60.063,100.131,100.860)
O4': (60.252,102.416,101.586)
C8: (63.326,102.555,100.835)
O2': (60.795,103.840,98.339)
C6: (65.039,104.951,102.761)
C5: (64.216,104.077,102.020)
C4: (62.881,104.410,101.914)
P: (62.449,99.031,100.804)
C4': (59.440,101.498,100.801)
C2': (60.715,102.815,99.303)
C2: (63.147,106.216,103.138)
N1: (64.459,106.029,103.323)
N3: (62.276,105.478,102.454)
N6: (66.354,104.778,102.928)
N7: (64.485,102.899,101.334)
N9: (62.308,103.428,101.140)
O5': (61.442,100.209,100.467)
O3': (58.236,102.976,99.357)
Image (generated by PyMOL):
PyMOL image
show in jmol