Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YTY:D6:D8
Extra
PDB:
ATOM 1 O3' U A 5 49.535 -6.860 -50.964 1.00 36.51 O
ATOM 2 P U A 6 50.651 -7.662 -51.766 1.00 38.24 P
ATOM 3 OP1 U A 6 51.719 -6.615 -51.668 1.00 37.12 O
ATOM 4 OP2 U A 6 50.023 -8.127 -53.059 1.00 35.62 O
ATOM 5 O5' U A 6 51.119 -9.023 -51.029 1.00 29.97 O
ATOM 6 C5' U A 6 51.766 -9.149 -49.749 1.00 24.46 C
ATOM 7 C4' U A 6 53.181 -9.649 -50.007 1.00 21.09 C
ATOM 8 O4' U A 6 53.220 -10.825 -50.840 1.00 17.20 O
ATOM 9 C3' U A 6 54.050 -8.651 -50.773 1.00 18.79 C
ATOM 10 O3' U A 6 55.230 -8.585 -50.080 1.00 22.70 O
ATOM 11 C2' U A 6 54.229 -9.222 -52.169 1.00 16.64 C
ATOM 12 O2' U A 6 55.432 -8.850 -52.818 1.00 16.60 O
ATOM 13 C1' U A 6 54.203 -10.701 -51.842 1.00 15.84 C
ATOM 14 N1 U A 6 53.681 -11.629 -52.866 1.00 16.42 N
ATOM 15 C2 U A 6 54.476 -12.665 -53.311 1.00 14.35 C
ATOM 16 O2 U A 6 55.630 -12.827 -52.966 1.00 15.11 O
ATOM 17 N3 U A 6 53.866 -13.487 -54.218 1.00 12.50 N
ATOM 18 C4 U A 6 52.574 -13.417 -54.672 1.00 15.62 C
ATOM 19 O4 U A 6 52.183 -14.241 -55.493 1.00 17.33 O
ATOM 20 C5 U A 6 51.785 -12.327 -54.135 1.00 16.34 C
ATOM 21 C6 U A 6 52.361 -11.488 -53.280 1.00 14.81 C
ATOM 22 P U A 7 55.504 -7.350 -49.113 1.00 22.61 P
ATOM 23 OP1 U A 7 54.323 -7.145 -48.262 1.00 24.60 O
ATOM 24 OP2 U A 7 55.977 -6.234 -49.997 1.00 24.30 O
ATOM 25 O5' U A 7 56.768 -7.891 -48.325 1.00 20.77 O
TER
ATOM 1 O3' U B 7 57.868 -11.959 -48.055 1.00 18.37 O
ATOM 2 P U B 8 57.907 -12.756 -49.457 1.00 13.87 P
ATOM 3 OP1 U B 8 58.427 -14.109 -49.144 1.00 12.42 O
ATOM 4 OP2 U B 8 58.515 -11.965 -50.527 1.00 14.38 O
ATOM 5 O5' U B 8 56.329 -12.852 -49.717 1.00 16.60 O
ATOM 6 C5' U B 8 55.510 -13.654 -48.918 1.00 16.26 C
ATOM 7 C4' U B 8 54.046 -13.541 -49.248 1.00 20.21 C
ATOM 8 O4' U B 8 53.749 -14.026 -50.598 1.00 23.38 O
ATOM 9 C3' U B 8 53.230 -14.477 -48.373 1.00 21.79 C
ATOM 10 O3' U B 8 52.898 -13.862 -47.171 1.00 17.90 O
ATOM 11 C2' U B 8 51.965 -14.743 -49.203 1.00 24.79 C
ATOM 12 O2' U B 8 51.031 -13.772 -48.820 1.00 27.84 O
ATOM 13 C1' U B 8 52.389 -14.444 -50.647 1.00 23.29 C
ATOM 14 N1 U B 8 52.249 -15.580 -51.601 1.00 23.07 N
ATOM 15 C2 U B 8 51.031 -15.777 -52.250 1.00 24.22 C
ATOM 16 O2 U B 8 50.027 -15.095 -52.071 1.00 25.40 O
ATOM 17 N3 U B 8 51.007 -16.822 -53.131 1.00 23.04 N
ATOM 18 C4 U B 8 52.013 -17.708 -53.442 1.00 24.04 C
ATOM 19 O4 U B 8 51.802 -18.604 -54.266 1.00 25.39 O
ATOM 20 C5 U B 8 53.234 -17.443 -52.725 1.00 24.80 C
ATOM 21 C6 U B 8 53.313 -16.405 -51.858 1.00 22.78 C
TER
ATOM 2 P U A 6 50.651 -7.662 -51.766 1.00 38.24 P
ATOM 3 OP1 U A 6 51.719 -6.615 -51.668 1.00 37.12 O
ATOM 4 OP2 U A 6 50.023 -8.127 -53.059 1.00 35.62 O
ATOM 5 O5' U A 6 51.119 -9.023 -51.029 1.00 29.97 O
ATOM 6 C5' U A 6 51.766 -9.149 -49.749 1.00 24.46 C
ATOM 7 C4' U A 6 53.181 -9.649 -50.007 1.00 21.09 C
ATOM 8 O4' U A 6 53.220 -10.825 -50.840 1.00 17.20 O
ATOM 9 C3' U A 6 54.050 -8.651 -50.773 1.00 18.79 C
ATOM 10 O3' U A 6 55.230 -8.585 -50.080 1.00 22.70 O
ATOM 11 C2' U A 6 54.229 -9.222 -52.169 1.00 16.64 C
ATOM 12 O2' U A 6 55.432 -8.850 -52.818 1.00 16.60 O
ATOM 13 C1' U A 6 54.203 -10.701 -51.842 1.00 15.84 C
ATOM 14 N1 U A 6 53.681 -11.629 -52.866 1.00 16.42 N
ATOM 15 C2 U A 6 54.476 -12.665 -53.311 1.00 14.35 C
ATOM 16 O2 U A 6 55.630 -12.827 -52.966 1.00 15.11 O
ATOM 17 N3 U A 6 53.866 -13.487 -54.218 1.00 12.50 N
ATOM 18 C4 U A 6 52.574 -13.417 -54.672 1.00 15.62 C
ATOM 19 O4 U A 6 52.183 -14.241 -55.493 1.00 17.33 O
ATOM 20 C5 U A 6 51.785 -12.327 -54.135 1.00 16.34 C
ATOM 21 C6 U A 6 52.361 -11.488 -53.280 1.00 14.81 C
ATOM 22 P U A 7 55.504 -7.350 -49.113 1.00 22.61 P
ATOM 23 OP1 U A 7 54.323 -7.145 -48.262 1.00 24.60 O
ATOM 24 OP2 U A 7 55.977 -6.234 -49.997 1.00 24.30 O
ATOM 25 O5' U A 7 56.768 -7.891 -48.325 1.00 20.77 O
TER
ATOM 1 O3' U B 7 57.868 -11.959 -48.055 1.00 18.37 O
ATOM 2 P U B 8 57.907 -12.756 -49.457 1.00 13.87 P
ATOM 3 OP1 U B 8 58.427 -14.109 -49.144 1.00 12.42 O
ATOM 4 OP2 U B 8 58.515 -11.965 -50.527 1.00 14.38 O
ATOM 5 O5' U B 8 56.329 -12.852 -49.717 1.00 16.60 O
ATOM 6 C5' U B 8 55.510 -13.654 -48.918 1.00 16.26 C
ATOM 7 C4' U B 8 54.046 -13.541 -49.248 1.00 20.21 C
ATOM 8 O4' U B 8 53.749 -14.026 -50.598 1.00 23.38 O
ATOM 9 C3' U B 8 53.230 -14.477 -48.373 1.00 21.79 C
ATOM 10 O3' U B 8 52.898 -13.862 -47.171 1.00 17.90 O
ATOM 11 C2' U B 8 51.965 -14.743 -49.203 1.00 24.79 C
ATOM 12 O2' U B 8 51.031 -13.772 -48.820 1.00 27.84 O
ATOM 13 C1' U B 8 52.389 -14.444 -50.647 1.00 23.29 C
ATOM 14 N1 U B 8 52.249 -15.580 -51.601 1.00 23.07 N
ATOM 15 C2 U B 8 51.031 -15.777 -52.250 1.00 24.22 C
ATOM 16 O2 U B 8 50.027 -15.095 -52.071 1.00 25.40 O
ATOM 17 N3 U B 8 51.007 -16.822 -53.131 1.00 23.04 N
ATOM 18 C4 U B 8 52.013 -17.708 -53.442 1.00 24.04 C
ATOM 19 O4 U B 8 51.802 -18.604 -54.266 1.00 25.39 O
ATOM 20 C5 U B 8 53.234 -17.443 -52.725 1.00 24.80 C
ATOM 21 C6 U B 8 53.313 -16.405 -51.858 1.00 22.78 C
TER
Atoms:
C4: (52.574,-13.417,-54.672)
N3: (53.866,-13.487,-54.218)
OP1: (51.719,-6.615,-51.668)
OP2: (50.023,-8.127,-53.059)
C2: (54.476,-12.665,-53.311)
C1': (54.203,-10.701,-51.842)
C3': (54.050,-8.651,-50.773)
O5': (51.119,-9.023,-51.029)
O4': (53.220,-10.825,-50.840)
C5': (51.766,-9.149,-49.749)
P: (50.651,-7.662,-51.766)
C4': (53.181,-9.649,-50.007)
C2': (54.229,-9.222,-52.169)
O2': (55.432,-8.850,-52.818)
N1: (53.681,-11.629,-52.866)
O4: (52.183,-14.241,-55.493)
O2: (55.630,-12.827,-52.966)
C6: (52.361,-11.488,-53.280)
C5: (51.785,-12.327,-54.135)
O3': (55.230,-8.585,-50.080)
N3: (53.866,-13.487,-54.218)
OP1: (51.719,-6.615,-51.668)
OP2: (50.023,-8.127,-53.059)
C2: (54.476,-12.665,-53.311)
C1': (54.203,-10.701,-51.842)
C3': (54.050,-8.651,-50.773)
O5': (51.119,-9.023,-51.029)
O4': (53.220,-10.825,-50.840)
C5': (51.766,-9.149,-49.749)
P: (50.651,-7.662,-51.766)
C4': (53.181,-9.649,-50.007)
C2': (54.229,-9.222,-52.169)
O2': (55.432,-8.850,-52.818)
N1: (53.681,-11.629,-52.866)
O4: (52.183,-14.241,-55.493)
O2: (55.630,-12.827,-52.966)
C6: (52.361,-11.488,-53.280)
C5: (51.785,-12.327,-54.135)
O3': (55.230,-8.585,-50.080)
C4: (52.013,-17.708,-53.442)
N3: (51.007,-16.822,-53.131)
OP1: (58.427,-14.109,-49.144)
OP2: (58.515,-11.965,-50.527)
C2: (51.031,-15.777,-52.250)
C1': (52.389,-14.444,-50.647)
C3': (53.230,-14.477,-48.373)
O5': (56.329,-12.852,-49.717)
O4': (53.749,-14.026,-50.598)
C5': (55.510,-13.654,-48.918)
P: (57.907,-12.756,-49.457)
C4': (54.046,-13.541,-49.248)
C2': (51.965,-14.743,-49.203)
O2': (51.031,-13.772,-48.820)
N1: (52.249,-15.580,-51.601)
O4: (51.802,-18.604,-54.266)
O2: (50.027,-15.095,-52.071)
C6: (53.313,-16.405,-51.858)
C5: (53.234,-17.443,-52.725)
O3': (52.898,-13.862,-47.171)
N3: (51.007,-16.822,-53.131)
OP1: (58.427,-14.109,-49.144)
OP2: (58.515,-11.965,-50.527)
C2: (51.031,-15.777,-52.250)
C1': (52.389,-14.444,-50.647)
C3': (53.230,-14.477,-48.373)
O5': (56.329,-12.852,-49.717)
O4': (53.749,-14.026,-50.598)
C5': (55.510,-13.654,-48.918)
P: (57.907,-12.756,-49.457)
C4': (54.046,-13.541,-49.248)
C2': (51.965,-14.743,-49.203)
O2': (51.031,-13.772,-48.820)
N1: (52.249,-15.580,-51.601)
O4: (51.802,-18.604,-54.266)
O2: (50.027,-15.095,-52.071)
C6: (53.313,-16.405,-51.858)
C5: (53.234,-17.443,-52.725)
O3': (52.898,-13.862,-47.171)
Image (generated by PyMOL):