ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01924:01954

Extra

PDB:
ATOM 1 O3' U A1923 100.026 120.985 111.670 1.00 42.87 O
ATOM 2 P A A1924 99.610 122.455 111.184 1.00 43.87 P
ATOM 3 OP1 A A1924 100.033 123.411 112.241 1.00 44.82 O
ATOM 4 OP2 A A1924 98.188 122.406 110.767 1.00 45.62 O
ATOM 5 O5' A A1924 100.499 122.699 109.884 1.00 42.80 O
ATOM 6 C5' A A1924 101.526 123.700 109.871 1.00 40.86 C
ATOM 7 C4' A A1924 102.125 123.829 108.490 1.00 41.15 C
ATOM 8 O4' A A1924 102.845 122.607 108.159 1.00 39.70 O
ATOM 9 C3' A A1924 101.158 124.084 107.326 1.00 42.14 C
ATOM 10 O3' A A1924 101.749 125.005 106.415 1.00 43.87 O
ATOM 11 C2' A A1924 101.091 122.720 106.644 1.00 41.62 C
ATOM 12 O2' A A1924 100.801 122.789 105.261 1.00 42.09 O
ATOM 13 C1' A A1924 102.522 122.239 106.840 1.00 40.26 C
ATOM 14 N9 A A1924 102.716 120.803 106.669 1.00 38.86 N
ATOM 15 C8 A A1924 101.798 119.798 106.814 1.00 38.70 C
ATOM 16 N7 A A1924 102.260 118.616 106.499 1.00 39.90 N
ATOM 17 C5 A A1924 103.576 118.857 106.137 1.00 38.55 C
ATOM 18 C6 A A1924 104.596 118.014 105.678 1.00 38.66 C
ATOM 19 N6 A A1924 104.437 116.708 105.462 1.00 37.21 N
ATOM 20 N1 A A1924 105.801 118.567 105.430 1.00 40.17 N
ATOM 21 C2 A A1924 105.951 119.883 105.615 1.00 39.52 C
ATOM 22 N3 A A1924 105.061 120.780 106.021 1.00 39.26 N
ATOM 23 C4 A A1924 103.879 120.195 106.268 1.00 38.57 C
ATOM 24 P G A1925 101.088 126.452 106.201 1.00 45.34 P
ATOM 25 OP1 G A1925 102.030 127.288 105.422 1.00 46.86 O
ATOM 26 OP2 G A1925 100.606 126.931 107.526 1.00 45.33 O
ATOM 27 O5' G A1925 99.828 126.166 105.278 1.00 47.97 O
TER

ATOM 1 O3' A B1953 102.773 111.541 102.750 1.00 51.43 O
ATOM 2 P U B1954 104.048 112.317 103.321 1.00 51.43 P
ATOM 3 OP1 U B1954 105.273 111.617 102.843 1.00 50.01 O
ATOM 4 OP2 U B1954 103.847 112.531 104.772 1.00 53.24 O
ATOM 5 O5' U B1954 103.930 113.743 102.637 1.00 51.30 O
ATOM 6 C5' U B1954 104.778 114.097 101.554 1.00 50.62 C
ATOM 7 C4' U B1954 105.337 115.474 101.770 1.00 49.50 C
ATOM 8 O4' U B1954 105.922 115.572 103.093 1.00 49.42 O
ATOM 9 C3' U B1954 106.475 115.793 100.832 1.00 49.35 C
ATOM 10 O3' U B1954 105.983 116.224 99.579 1.00 48.48 O
ATOM 11 C2' U B1954 107.243 116.853 101.596 1.00 49.95 C
ATOM 12 O2' U B1954 106.637 118.123 101.511 1.00 53.41 O
ATOM 13 C1' U B1954 107.120 116.328 103.030 1.00 49.49 C
ATOM 14 N1 U B1954 108.235 115.460 103.445 1.00 48.54 N
ATOM 15 C2 U B1954 109.525 115.951 103.333 1.00 48.83 C
ATOM 16 O2 U B1954 109.782 117.065 102.910 1.00 50.93 O
ATOM 17 N3 U B1954 110.507 115.089 103.735 1.00 48.09 N
ATOM 18 C4 U B1954 110.345 113.821 104.227 1.00 47.59 C
ATOM 19 O4 U B1954 111.337 113.164 104.537 1.00 48.10 O
ATOM 20 C5 U B1954 108.991 113.386 104.315 1.00 48.09 C
ATOM 21 C6 U B1954 108.008 114.197 103.932 1.00 47.72 C
ATOM 22 P G B1955 106.557 115.556 98.247 1.00 48.98 P
ATOM 23 OP1 G B1955 105.821 116.121 97.085 1.00 49.14 O
ATOM 24 OP2 G B1955 106.606 114.083 98.446 1.00 48.31 O
ATOM 25 O5' G B1955 108.055 116.083 98.209 1.00 49.67 O
TER

Atoms:
OP1: (100.033,123.411,112.241)
OP2: (98.188,122.406,110.767)
C3': (101.158,124.084,107.326)
C1': (102.522,122.239,106.840)
C5': (101.526,123.700,109.871)
O4': (102.845,122.607,108.159)
C8: (101.798,119.798,106.814)
O2': (100.801,122.789,105.261)
C6: (104.596,118.014,105.678)
C5: (103.576,118.857,106.137)
C4: (103.879,120.195,106.268)
P: (99.610,122.455,111.184)
C4': (102.125,123.829,108.490)
C2': (101.091,122.720,106.644)
C2: (105.951,119.883,105.615)
N1: (105.801,118.567,105.430)
N3: (105.061,120.780,106.021)
N6: (104.437,116.708,105.462)
N7: (102.260,118.616,106.499)
N9: (102.716,120.803,106.669)
O5': (100.499,122.699,109.884)
O3': (101.749,125.005,106.415)
C4: (110.345,113.821,104.227)
N3: (110.507,115.089,103.735)
OP1: (105.273,111.617,102.843)
OP2: (103.847,112.531,104.772)
C2: (109.525,115.951,103.333)
C1': (107.120,116.328,103.030)
C3': (106.475,115.793,100.832)
O5': (103.930,113.743,102.637)
O4': (105.922,115.572,103.093)
C5': (104.778,114.097,101.554)
P: (104.048,112.317,103.321)
C4': (105.337,115.474,101.770)
C2': (107.243,116.853,101.596)
O2': (106.637,118.123,101.511)
N1: (108.235,115.460,103.445)
O4: (111.337,113.164,104.537)
O2: (109.782,117.065,102.910)
C6: (108.008,114.197,103.932)
C5: (108.991,113.386,104.315)
O3': (105.983,116.224,99.579)
Image (generated by PyMOL):
PyMOL image
show in jmol