Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VON:C4:C6
Extra
PDB:
ATOM 1 O3' A A 3 35.484 -10.599 -2.511 1.00 24.90 O
ATOM 2 P U A 4 35.140 -10.710 -4.073 1.00 24.41 P
ATOM 3 OP1 U A 4 36.012 -9.757 -4.812 1.00 24.09 O
ATOM 4 OP2 U A 4 35.140 -12.151 -4.443 1.00 27.25 O
ATOM 5 O5' U A 4 33.653 -10.160 -4.169 1.00 21.88 O
ATOM 6 C5' U A 4 32.549 -10.939 -3.677 1.00 18.68 C
ATOM 7 C4' U A 4 31.254 -10.368 -4.186 1.00 15.18 C
ATOM 8 O4' U A 4 30.914 -9.183 -3.419 1.00 11.77 O
ATOM 9 C3' U A 4 31.244 -9.968 -5.663 1.00 16.11 C
ATOM 10 O3' U A 4 30.076 -10.464 -6.310 1.00 18.60 O
ATOM 11 C2' U A 4 31.290 -8.437 -5.623 1.00 15.18 C
ATOM 12 O2' U A 4 30.574 -7.838 -6.683 1.00 13.09 O
ATOM 13 C1' U A 4 30.592 -8.133 -4.301 1.00 14.59 C
ATOM 14 N1 U A 4 30.952 -6.855 -3.668 1.00 17.53 N
ATOM 15 C2 U A 4 29.942 -5.913 -3.541 1.00 14.23 C
ATOM 16 O2 U A 4 28.813 -6.100 -3.948 1.00 9.19 O
ATOM 17 N3 U A 4 30.310 -4.745 -2.925 1.00 16.18 N
ATOM 18 C4 U A 4 31.564 -4.420 -2.434 1.00 17.51 C
ATOM 19 O4 U A 4 31.732 -3.327 -1.887 1.00 14.86 O
ATOM 20 C5 U A 4 32.561 -5.438 -2.611 1.00 16.31 C
ATOM 21 C6 U A 4 32.230 -6.592 -3.208 1.00 16.52 C
ATOM 22 P U A 5 30.227 -11.655 -7.388 1.00 22.14 P
ATOM 23 OP1 U A 5 30.821 -11.049 -8.610 1.00 22.18 O
ATOM 24 OP2 U A 5 30.925 -12.774 -6.716 1.00 21.63 O
ATOM 25 O5' U A 5 28.734 -12.133 -7.691 1.00 22.93 O
TER
ATOM 1 O3' U B 5 25.878 -9.769 -5.877 1.00 13.00 O
ATOM 2 P U B 6 26.719 -8.429 -5.573 1.00 10.96 P
ATOM 3 OP1 U B 6 27.613 -8.175 -6.734 1.00 13.13 O
ATOM 4 OP2 U B 6 25.754 -7.389 -5.157 1.00 12.17 O
ATOM 5 O5' U B 6 27.632 -8.821 -4.326 1.00 10.66 O
ATOM 6 C5' U B 6 27.043 -9.159 -3.054 1.00 11.77 C
ATOM 7 C4' U B 6 28.120 -9.432 -2.020 1.00 11.50 C
ATOM 8 O4' U B 6 28.906 -8.250 -1.768 1.00 10.94 O
ATOM 9 C3' U B 6 27.582 -9.768 -0.640 1.00 11.36 C
ATOM 10 O3' U B 6 27.087 -11.100 -0.600 1.00 14.95 O
ATOM 11 C2' U B 6 28.704 -9.380 0.327 1.00 10.44 C
ATOM 12 O2' U B 6 29.523 -10.454 0.713 1.00 12.40 O
ATOM 13 C1' U B 6 29.535 -8.403 -0.514 1.00 12.07 C
ATOM 14 N1 U B 6 29.808 -7.083 0.071 1.00 13.63 N
ATOM 15 C2 U B 6 31.116 -6.827 0.480 1.00 16.82 C
ATOM 16 O2 U B 6 32.023 -7.660 0.405 1.00 13.71 O
ATOM 17 N3 U B 6 31.324 -5.567 0.982 1.00 16.25 N
ATOM 18 C4 U B 6 30.389 -4.563 1.127 1.00 16.47 C
ATOM 19 O4 U B 6 30.730 -3.488 1.621 1.00 17.25 O
ATOM 20 C5 U B 6 29.067 -4.909 0.701 1.00 16.00 C
ATOM 21 C6 U B 6 28.826 -6.128 0.202 1.00 17.22 C
TER
ATOM 2 P U A 4 35.140 -10.710 -4.073 1.00 24.41 P
ATOM 3 OP1 U A 4 36.012 -9.757 -4.812 1.00 24.09 O
ATOM 4 OP2 U A 4 35.140 -12.151 -4.443 1.00 27.25 O
ATOM 5 O5' U A 4 33.653 -10.160 -4.169 1.00 21.88 O
ATOM 6 C5' U A 4 32.549 -10.939 -3.677 1.00 18.68 C
ATOM 7 C4' U A 4 31.254 -10.368 -4.186 1.00 15.18 C
ATOM 8 O4' U A 4 30.914 -9.183 -3.419 1.00 11.77 O
ATOM 9 C3' U A 4 31.244 -9.968 -5.663 1.00 16.11 C
ATOM 10 O3' U A 4 30.076 -10.464 -6.310 1.00 18.60 O
ATOM 11 C2' U A 4 31.290 -8.437 -5.623 1.00 15.18 C
ATOM 12 O2' U A 4 30.574 -7.838 -6.683 1.00 13.09 O
ATOM 13 C1' U A 4 30.592 -8.133 -4.301 1.00 14.59 C
ATOM 14 N1 U A 4 30.952 -6.855 -3.668 1.00 17.53 N
ATOM 15 C2 U A 4 29.942 -5.913 -3.541 1.00 14.23 C
ATOM 16 O2 U A 4 28.813 -6.100 -3.948 1.00 9.19 O
ATOM 17 N3 U A 4 30.310 -4.745 -2.925 1.00 16.18 N
ATOM 18 C4 U A 4 31.564 -4.420 -2.434 1.00 17.51 C
ATOM 19 O4 U A 4 31.732 -3.327 -1.887 1.00 14.86 O
ATOM 20 C5 U A 4 32.561 -5.438 -2.611 1.00 16.31 C
ATOM 21 C6 U A 4 32.230 -6.592 -3.208 1.00 16.52 C
ATOM 22 P U A 5 30.227 -11.655 -7.388 1.00 22.14 P
ATOM 23 OP1 U A 5 30.821 -11.049 -8.610 1.00 22.18 O
ATOM 24 OP2 U A 5 30.925 -12.774 -6.716 1.00 21.63 O
ATOM 25 O5' U A 5 28.734 -12.133 -7.691 1.00 22.93 O
TER
ATOM 1 O3' U B 5 25.878 -9.769 -5.877 1.00 13.00 O
ATOM 2 P U B 6 26.719 -8.429 -5.573 1.00 10.96 P
ATOM 3 OP1 U B 6 27.613 -8.175 -6.734 1.00 13.13 O
ATOM 4 OP2 U B 6 25.754 -7.389 -5.157 1.00 12.17 O
ATOM 5 O5' U B 6 27.632 -8.821 -4.326 1.00 10.66 O
ATOM 6 C5' U B 6 27.043 -9.159 -3.054 1.00 11.77 C
ATOM 7 C4' U B 6 28.120 -9.432 -2.020 1.00 11.50 C
ATOM 8 O4' U B 6 28.906 -8.250 -1.768 1.00 10.94 O
ATOM 9 C3' U B 6 27.582 -9.768 -0.640 1.00 11.36 C
ATOM 10 O3' U B 6 27.087 -11.100 -0.600 1.00 14.95 O
ATOM 11 C2' U B 6 28.704 -9.380 0.327 1.00 10.44 C
ATOM 12 O2' U B 6 29.523 -10.454 0.713 1.00 12.40 O
ATOM 13 C1' U B 6 29.535 -8.403 -0.514 1.00 12.07 C
ATOM 14 N1 U B 6 29.808 -7.083 0.071 1.00 13.63 N
ATOM 15 C2 U B 6 31.116 -6.827 0.480 1.00 16.82 C
ATOM 16 O2 U B 6 32.023 -7.660 0.405 1.00 13.71 O
ATOM 17 N3 U B 6 31.324 -5.567 0.982 1.00 16.25 N
ATOM 18 C4 U B 6 30.389 -4.563 1.127 1.00 16.47 C
ATOM 19 O4 U B 6 30.730 -3.488 1.621 1.00 17.25 O
ATOM 20 C5 U B 6 29.067 -4.909 0.701 1.00 16.00 C
ATOM 21 C6 U B 6 28.826 -6.128 0.202 1.00 17.22 C
TER
Atoms:
C4: (31.564,-4.420,-2.434)
N3: (30.310,-4.745,-2.925)
OP1: (36.012,-9.757,-4.812)
OP2: (35.140,-12.151,-4.443)
C2: (29.942,-5.913,-3.541)
C1': (30.592,-8.133,-4.301)
C3': (31.244,-9.968,-5.663)
O5': (33.653,-10.160,-4.169)
O4': (30.914,-9.183,-3.419)
C5': (32.549,-10.939,-3.677)
P: (35.140,-10.710,-4.073)
C4': (31.254,-10.368,-4.186)
C2': (31.290,-8.437,-5.623)
O2': (30.574,-7.838,-6.683)
N1: (30.952,-6.855,-3.668)
O4: (31.732,-3.327,-1.887)
O2: (28.813,-6.100,-3.948)
C6: (32.230,-6.592,-3.208)
C5: (32.561,-5.438,-2.611)
O3': (30.076,-10.464,-6.310)
N3: (30.310,-4.745,-2.925)
OP1: (36.012,-9.757,-4.812)
OP2: (35.140,-12.151,-4.443)
C2: (29.942,-5.913,-3.541)
C1': (30.592,-8.133,-4.301)
C3': (31.244,-9.968,-5.663)
O5': (33.653,-10.160,-4.169)
O4': (30.914,-9.183,-3.419)
C5': (32.549,-10.939,-3.677)
P: (35.140,-10.710,-4.073)
C4': (31.254,-10.368,-4.186)
C2': (31.290,-8.437,-5.623)
O2': (30.574,-7.838,-6.683)
N1: (30.952,-6.855,-3.668)
O4: (31.732,-3.327,-1.887)
O2: (28.813,-6.100,-3.948)
C6: (32.230,-6.592,-3.208)
C5: (32.561,-5.438,-2.611)
O3': (30.076,-10.464,-6.310)
C4: (30.389,-4.563,1.127)
N3: (31.324,-5.567,0.982)
OP1: (27.613,-8.175,-6.734)
OP2: (25.754,-7.389,-5.157)
C2: (31.116,-6.827,0.480)
C1': (29.535,-8.403,-0.514)
C3': (27.582,-9.768,-0.640)
O5': (27.632,-8.821,-4.326)
O4': (28.906,-8.250,-1.768)
C5': (27.043,-9.159,-3.054)
P: (26.719,-8.429,-5.573)
C4': (28.120,-9.432,-2.020)
C2': (28.704,-9.380,0.327)
O2': (29.523,-10.454,0.713)
N1: (29.808,-7.083,0.071)
O4: (30.730,-3.488,1.621)
O2: (32.023,-7.660,0.405)
C6: (28.826,-6.128,0.202)
C5: (29.067,-4.909,0.701)
O3': (27.087,-11.100,-0.600)
N3: (31.324,-5.567,0.982)
OP1: (27.613,-8.175,-6.734)
OP2: (25.754,-7.389,-5.157)
C2: (31.116,-6.827,0.480)
C1': (29.535,-8.403,-0.514)
C3': (27.582,-9.768,-0.640)
O5': (27.632,-8.821,-4.326)
O4': (28.906,-8.250,-1.768)
C5': (27.043,-9.159,-3.054)
P: (26.719,-8.429,-5.573)
C4': (28.120,-9.432,-2.020)
C2': (28.704,-9.380,0.327)
O2': (29.523,-10.454,0.713)
N1: (29.808,-7.083,0.071)
O4: (30.730,-3.488,1.621)
O2: (32.023,-7.660,0.405)
C6: (28.826,-6.128,0.202)
C5: (29.067,-4.909,0.701)
O3': (27.087,-11.100,-0.600)
Image (generated by PyMOL):