Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VON:D4:D6
Extra
PDB:
ATOM 1 O3' A A 3 -14.910 -24.672 -43.349 1.00 22.28 O
ATOM 2 P U A 4 -13.551 -24.622 -44.205 1.00 22.61 P
ATOM 3 OP1 U A 4 -13.648 -25.615 -45.307 1.00 22.99 O
ATOM 4 OP2 U A 4 -13.261 -23.196 -44.522 1.00 23.23 O
ATOM 5 O5' U A 4 -12.434 -25.150 -43.200 1.00 21.69 O
ATOM 6 C5' U A 4 -12.007 -24.340 -42.094 1.00 19.65 C
ATOM 7 C4' U A 4 -10.776 -24.932 -41.455 1.00 18.72 C
ATOM 8 O4' U A 4 -11.144 -26.112 -40.688 1.00 17.23 O
ATOM 9 C3' U A 4 -9.637 -25.337 -42.393 1.00 17.28 C
ATOM 10 O3' U A 4 -8.387 -24.833 -41.912 1.00 21.27 O
ATOM 11 C2' U A 4 -9.699 -26.869 -42.388 1.00 15.47 C
ATOM 12 O2' U A 4 -8.434 -27.478 -42.543 1.00 13.68 O
ATOM 13 C1' U A 4 -10.261 -27.166 -40.996 1.00 15.80 C
ATOM 14 N1 U A 4 -10.981 -28.443 -40.844 1.00 16.28 N
ATOM 15 C2 U A 4 -10.434 -29.379 -39.977 1.00 12.97 C
ATOM 16 O2 U A 4 -9.386 -29.195 -39.368 1.00 11.89 O
ATOM 17 N3 U A 4 -11.151 -30.540 -39.848 1.00 13.94 N
ATOM 18 C4 U A 4 -12.331 -30.867 -40.480 1.00 17.37 C
ATOM 19 O4 U A 4 -12.870 -31.948 -40.227 1.00 16.13 O
ATOM 20 C5 U A 4 -12.834 -29.857 -41.371 1.00 16.38 C
ATOM 21 C6 U A 4 -12.157 -28.709 -41.519 1.00 15.76 C
ATOM 22 P U A 5 -7.705 -23.570 -42.655 1.00 22.05 P
ATOM 23 OP1 U A 5 -7.240 -24.065 -43.968 1.00 24.79 O
ATOM 24 OP2 U A 5 -8.651 -22.430 -42.591 1.00 23.46 O
ATOM 25 O5' U A 5 -6.459 -23.157 -41.745 1.00 24.59 O
TER
ATOM 1 O3' U B 5 -5.982 -25.534 -38.461 1.00 11.03 O
ATOM 2 P U B 6 -6.782 -26.858 -38.893 1.00 9.30 P
ATOM 3 OP1 U B 6 -6.483 -27.096 -40.329 1.00 12.51 O
ATOM 4 OP2 U B 6 -6.450 -27.894 -37.894 1.00 10.36 O
ATOM 5 O5' U B 6 -8.321 -26.456 -38.761 1.00 11.40 O
ATOM 6 C5' U B 6 -8.894 -26.100 -37.479 1.00 11.15 C
ATOM 7 C4' U B 6 -10.385 -25.851 -37.611 1.00 11.29 C
ATOM 8 O4' U B 6 -11.074 -27.059 -37.991 1.00 9.99 O
ATOM 9 C3' U B 6 -11.098 -25.471 -36.325 1.00 10.79 C
ATOM 10 O3' U B 6 -10.809 -24.120 -35.971 1.00 12.30 O
ATOM 11 C2' U B 6 -12.561 -25.863 -36.562 1.00 11.04 C
ATOM 12 O2' U B 6 -13.375 -24.796 -36.998 1.00 13.82 O
ATOM 13 C1' U B 6 -12.443 -26.890 -37.696 1.00 9.36 C
ATOM 14 N1 U B 6 -13.077 -28.203 -37.502 1.00 12.94 N
ATOM 15 C2 U B 6 -14.292 -28.429 -38.155 1.00 14.26 C
ATOM 16 O2 U B 6 -14.857 -27.580 -38.834 1.00 13.32 O
ATOM 17 N3 U B 6 -14.820 -29.683 -37.978 1.00 13.62 N
ATOM 18 C4 U B 6 -14.286 -30.715 -37.229 1.00 14.91 C
ATOM 19 O4 U B 6 -14.865 -31.804 -37.202 1.00 13.26 O
ATOM 20 C5 U B 6 -13.049 -30.400 -36.566 1.00 13.60 C
ATOM 21 C6 U B 6 -12.501 -29.186 -36.721 1.00 14.82 C
TER
ATOM 2 P U A 4 -13.551 -24.622 -44.205 1.00 22.61 P
ATOM 3 OP1 U A 4 -13.648 -25.615 -45.307 1.00 22.99 O
ATOM 4 OP2 U A 4 -13.261 -23.196 -44.522 1.00 23.23 O
ATOM 5 O5' U A 4 -12.434 -25.150 -43.200 1.00 21.69 O
ATOM 6 C5' U A 4 -12.007 -24.340 -42.094 1.00 19.65 C
ATOM 7 C4' U A 4 -10.776 -24.932 -41.455 1.00 18.72 C
ATOM 8 O4' U A 4 -11.144 -26.112 -40.688 1.00 17.23 O
ATOM 9 C3' U A 4 -9.637 -25.337 -42.393 1.00 17.28 C
ATOM 10 O3' U A 4 -8.387 -24.833 -41.912 1.00 21.27 O
ATOM 11 C2' U A 4 -9.699 -26.869 -42.388 1.00 15.47 C
ATOM 12 O2' U A 4 -8.434 -27.478 -42.543 1.00 13.68 O
ATOM 13 C1' U A 4 -10.261 -27.166 -40.996 1.00 15.80 C
ATOM 14 N1 U A 4 -10.981 -28.443 -40.844 1.00 16.28 N
ATOM 15 C2 U A 4 -10.434 -29.379 -39.977 1.00 12.97 C
ATOM 16 O2 U A 4 -9.386 -29.195 -39.368 1.00 11.89 O
ATOM 17 N3 U A 4 -11.151 -30.540 -39.848 1.00 13.94 N
ATOM 18 C4 U A 4 -12.331 -30.867 -40.480 1.00 17.37 C
ATOM 19 O4 U A 4 -12.870 -31.948 -40.227 1.00 16.13 O
ATOM 20 C5 U A 4 -12.834 -29.857 -41.371 1.00 16.38 C
ATOM 21 C6 U A 4 -12.157 -28.709 -41.519 1.00 15.76 C
ATOM 22 P U A 5 -7.705 -23.570 -42.655 1.00 22.05 P
ATOM 23 OP1 U A 5 -7.240 -24.065 -43.968 1.00 24.79 O
ATOM 24 OP2 U A 5 -8.651 -22.430 -42.591 1.00 23.46 O
ATOM 25 O5' U A 5 -6.459 -23.157 -41.745 1.00 24.59 O
TER
ATOM 1 O3' U B 5 -5.982 -25.534 -38.461 1.00 11.03 O
ATOM 2 P U B 6 -6.782 -26.858 -38.893 1.00 9.30 P
ATOM 3 OP1 U B 6 -6.483 -27.096 -40.329 1.00 12.51 O
ATOM 4 OP2 U B 6 -6.450 -27.894 -37.894 1.00 10.36 O
ATOM 5 O5' U B 6 -8.321 -26.456 -38.761 1.00 11.40 O
ATOM 6 C5' U B 6 -8.894 -26.100 -37.479 1.00 11.15 C
ATOM 7 C4' U B 6 -10.385 -25.851 -37.611 1.00 11.29 C
ATOM 8 O4' U B 6 -11.074 -27.059 -37.991 1.00 9.99 O
ATOM 9 C3' U B 6 -11.098 -25.471 -36.325 1.00 10.79 C
ATOM 10 O3' U B 6 -10.809 -24.120 -35.971 1.00 12.30 O
ATOM 11 C2' U B 6 -12.561 -25.863 -36.562 1.00 11.04 C
ATOM 12 O2' U B 6 -13.375 -24.796 -36.998 1.00 13.82 O
ATOM 13 C1' U B 6 -12.443 -26.890 -37.696 1.00 9.36 C
ATOM 14 N1 U B 6 -13.077 -28.203 -37.502 1.00 12.94 N
ATOM 15 C2 U B 6 -14.292 -28.429 -38.155 1.00 14.26 C
ATOM 16 O2 U B 6 -14.857 -27.580 -38.834 1.00 13.32 O
ATOM 17 N3 U B 6 -14.820 -29.683 -37.978 1.00 13.62 N
ATOM 18 C4 U B 6 -14.286 -30.715 -37.229 1.00 14.91 C
ATOM 19 O4 U B 6 -14.865 -31.804 -37.202 1.00 13.26 O
ATOM 20 C5 U B 6 -13.049 -30.400 -36.566 1.00 13.60 C
ATOM 21 C6 U B 6 -12.501 -29.186 -36.721 1.00 14.82 C
TER
Atoms:
C4: (-12.331,-30.867,-40.480)
N3: (-11.151,-30.540,-39.848)
OP1: (-13.648,-25.615,-45.307)
OP2: (-13.261,-23.196,-44.522)
C2: (-10.434,-29.379,-39.977)
C1': (-10.261,-27.166,-40.996)
C3': (-9.637,-25.337,-42.393)
O5': (-12.434,-25.150,-43.200)
O4': (-11.144,-26.112,-40.688)
C5': (-12.007,-24.340,-42.094)
P: (-13.551,-24.622,-44.205)
C4': (-10.776,-24.932,-41.455)
C2': (-9.699,-26.869,-42.388)
O2': (-8.434,-27.478,-42.543)
N1: (-10.981,-28.443,-40.844)
O4: (-12.870,-31.948,-40.227)
O2: (-9.386,-29.195,-39.368)
C6: (-12.157,-28.709,-41.519)
C5: (-12.834,-29.857,-41.371)
O3': (-8.387,-24.833,-41.912)
N3: (-11.151,-30.540,-39.848)
OP1: (-13.648,-25.615,-45.307)
OP2: (-13.261,-23.196,-44.522)
C2: (-10.434,-29.379,-39.977)
C1': (-10.261,-27.166,-40.996)
C3': (-9.637,-25.337,-42.393)
O5': (-12.434,-25.150,-43.200)
O4': (-11.144,-26.112,-40.688)
C5': (-12.007,-24.340,-42.094)
P: (-13.551,-24.622,-44.205)
C4': (-10.776,-24.932,-41.455)
C2': (-9.699,-26.869,-42.388)
O2': (-8.434,-27.478,-42.543)
N1: (-10.981,-28.443,-40.844)
O4: (-12.870,-31.948,-40.227)
O2: (-9.386,-29.195,-39.368)
C6: (-12.157,-28.709,-41.519)
C5: (-12.834,-29.857,-41.371)
O3': (-8.387,-24.833,-41.912)
C4: (-14.286,-30.715,-37.229)
N3: (-14.820,-29.683,-37.978)
OP1: (-6.483,-27.096,-40.329)
OP2: (-6.450,-27.894,-37.894)
C2: (-14.292,-28.429,-38.155)
C1': (-12.443,-26.890,-37.696)
C3': (-11.098,-25.471,-36.325)
O5': (-8.321,-26.456,-38.761)
O4': (-11.074,-27.059,-37.991)
C5': (-8.894,-26.100,-37.479)
P: (-6.782,-26.858,-38.893)
C4': (-10.385,-25.851,-37.611)
C2': (-12.561,-25.863,-36.562)
O2': (-13.375,-24.796,-36.998)
N1: (-13.077,-28.203,-37.502)
O4: (-14.865,-31.804,-37.202)
O2: (-14.857,-27.580,-38.834)
C6: (-12.501,-29.186,-36.721)
C5: (-13.049,-30.400,-36.566)
O3': (-10.809,-24.120,-35.971)
N3: (-14.820,-29.683,-37.978)
OP1: (-6.483,-27.096,-40.329)
OP2: (-6.450,-27.894,-37.894)
C2: (-14.292,-28.429,-38.155)
C1': (-12.443,-26.890,-37.696)
C3': (-11.098,-25.471,-36.325)
O5': (-8.321,-26.456,-38.761)
O4': (-11.074,-27.059,-37.991)
C5': (-8.894,-26.100,-37.479)
P: (-6.782,-26.858,-38.893)
C4': (-10.385,-25.851,-37.611)
C2': (-12.561,-25.863,-36.562)
O2': (-13.375,-24.796,-36.998)
N1: (-13.077,-28.203,-37.502)
O4: (-14.865,-31.804,-37.202)
O2: (-14.857,-27.580,-38.834)
C6: (-12.501,-29.186,-36.721)
C5: (-13.049,-30.400,-36.566)
O3': (-10.809,-24.120,-35.971)
Image (generated by PyMOL):