Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VOP:B1:B4
Extra
PDB:
ATOM 1 P U A 1 -2.965 20.260 4.753 1.00 76.20 P
ATOM 2 OP1 U A 1 -4.317 19.700 5.020 1.00 75.85 O
ATOM 3 OP2 U A 1 -2.103 19.636 3.708 1.00 76.68 O
ATOM 4 O5' U A 1 -2.156 20.218 6.123 1.00 76.25 O
ATOM 5 C5' U A 1 -0.721 20.332 6.150 1.00 76.44 C
ATOM 6 C4' U A 1 -0.214 20.124 7.556 1.00 76.54 C
ATOM 7 O4' U A 1 -0.464 21.299 8.366 1.00 74.79 O
ATOM 8 C3' U A 1 -0.860 18.959 8.279 1.00 78.05 C
ATOM 9 O3' U A 1 0.111 18.212 8.967 1.00 83.79 O
ATOM 10 C2' U A 1 -1.867 19.608 9.211 1.00 75.05 C
ATOM 11 O2' U A 1 -2.044 18.840 10.379 1.00 75.48 O
ATOM 12 C1' U A 1 -1.212 20.954 9.508 1.00 72.12 C
ATOM 13 N1 U A 1 -2.198 22.020 9.739 1.00 68.09 N
ATOM 14 C2 U A 1 -2.228 22.625 10.990 1.00 66.32 C
ATOM 15 O2 U A 1 -1.472 22.321 11.899 1.00 64.43 O
ATOM 16 N3 U A 1 -3.184 23.601 11.135 1.00 64.24 N
ATOM 17 C4 U A 1 -4.089 24.026 10.182 1.00 62.86 C
ATOM 18 O4 U A 1 -4.870 24.938 10.451 1.00 61.27 O
ATOM 19 C5 U A 1 -3.989 23.356 8.923 1.00 63.37 C
ATOM 20 C6 U A 1 -3.072 22.406 8.747 1.00 65.60 C
ATOM 21 P U A 2 0.561 16.809 8.342 1.00 89.96 P
ATOM 22 OP1 U A 2 -0.683 15.966 8.263 1.00 88.71 O
ATOM 23 OP2 U A 2 1.316 17.132 7.092 1.00 89.21 O
ATOM 24 O5' U A 2 1.554 16.169 9.408 1.00 88.76 O
TER
ATOM 1 O3' U B 3 3.312 19.904 13.956 1.00 46.35 O
ATOM 2 P U B 4 1.876 20.445 13.507 1.00 45.82 P
ATOM 3 OP1 U B 4 0.912 19.316 13.594 1.00 47.00 O
ATOM 4 OP2 U B 4 1.631 21.666 14.308 1.00 48.15 O
ATOM 5 O5' U B 4 2.041 20.881 11.973 1.00 46.97 O
ATOM 6 C5' U B 4 2.744 22.095 11.601 1.00 47.67 C
ATOM 7 C4' U B 4 2.532 22.417 10.127 1.00 47.86 C
ATOM 8 O4' U B 4 1.188 22.901 9.881 1.00 46.66 O
ATOM 9 C3' U B 4 3.376 23.567 9.600 1.00 47.46 C
ATOM 10 O3' U B 4 4.752 23.226 9.442 1.00 46.89 O
ATOM 11 C2' U B 4 2.617 24.086 8.374 1.00 46.90 C
ATOM 12 O2' U B 4 3.080 23.552 7.146 1.00 49.23 O
ATOM 13 C1' U B 4 1.191 23.596 8.651 1.00 45.71 C
ATOM 14 N1 U B 4 0.097 24.581 8.611 1.00 45.94 N
ATOM 15 C2 U B 4 -0.561 24.739 7.388 1.00 46.42 C
ATOM 16 O2 U B 4 -0.255 24.114 6.376 1.00 46.37 O
ATOM 17 N3 U B 4 -1.584 25.654 7.392 1.00 47.02 N
ATOM 18 C4 U B 4 -2.017 26.423 8.467 1.00 49.19 C
ATOM 19 O4 U B 4 -2.951 27.230 8.301 1.00 49.70 O
ATOM 20 C5 U B 4 -1.287 26.208 9.693 1.00 47.15 C
ATOM 21 C6 U B 4 -0.280 25.318 9.720 1.00 47.08 C
TER
ATOM 2 OP1 U A 1 -4.317 19.700 5.020 1.00 75.85 O
ATOM 3 OP2 U A 1 -2.103 19.636 3.708 1.00 76.68 O
ATOM 4 O5' U A 1 -2.156 20.218 6.123 1.00 76.25 O
ATOM 5 C5' U A 1 -0.721 20.332 6.150 1.00 76.44 C
ATOM 6 C4' U A 1 -0.214 20.124 7.556 1.00 76.54 C
ATOM 7 O4' U A 1 -0.464 21.299 8.366 1.00 74.79 O
ATOM 8 C3' U A 1 -0.860 18.959 8.279 1.00 78.05 C
ATOM 9 O3' U A 1 0.111 18.212 8.967 1.00 83.79 O
ATOM 10 C2' U A 1 -1.867 19.608 9.211 1.00 75.05 C
ATOM 11 O2' U A 1 -2.044 18.840 10.379 1.00 75.48 O
ATOM 12 C1' U A 1 -1.212 20.954 9.508 1.00 72.12 C
ATOM 13 N1 U A 1 -2.198 22.020 9.739 1.00 68.09 N
ATOM 14 C2 U A 1 -2.228 22.625 10.990 1.00 66.32 C
ATOM 15 O2 U A 1 -1.472 22.321 11.899 1.00 64.43 O
ATOM 16 N3 U A 1 -3.184 23.601 11.135 1.00 64.24 N
ATOM 17 C4 U A 1 -4.089 24.026 10.182 1.00 62.86 C
ATOM 18 O4 U A 1 -4.870 24.938 10.451 1.00 61.27 O
ATOM 19 C5 U A 1 -3.989 23.356 8.923 1.00 63.37 C
ATOM 20 C6 U A 1 -3.072 22.406 8.747 1.00 65.60 C
ATOM 21 P U A 2 0.561 16.809 8.342 1.00 89.96 P
ATOM 22 OP1 U A 2 -0.683 15.966 8.263 1.00 88.71 O
ATOM 23 OP2 U A 2 1.316 17.132 7.092 1.00 89.21 O
ATOM 24 O5' U A 2 1.554 16.169 9.408 1.00 88.76 O
TER
ATOM 1 O3' U B 3 3.312 19.904 13.956 1.00 46.35 O
ATOM 2 P U B 4 1.876 20.445 13.507 1.00 45.82 P
ATOM 3 OP1 U B 4 0.912 19.316 13.594 1.00 47.00 O
ATOM 4 OP2 U B 4 1.631 21.666 14.308 1.00 48.15 O
ATOM 5 O5' U B 4 2.041 20.881 11.973 1.00 46.97 O
ATOM 6 C5' U B 4 2.744 22.095 11.601 1.00 47.67 C
ATOM 7 C4' U B 4 2.532 22.417 10.127 1.00 47.86 C
ATOM 8 O4' U B 4 1.188 22.901 9.881 1.00 46.66 O
ATOM 9 C3' U B 4 3.376 23.567 9.600 1.00 47.46 C
ATOM 10 O3' U B 4 4.752 23.226 9.442 1.00 46.89 O
ATOM 11 C2' U B 4 2.617 24.086 8.374 1.00 46.90 C
ATOM 12 O2' U B 4 3.080 23.552 7.146 1.00 49.23 O
ATOM 13 C1' U B 4 1.191 23.596 8.651 1.00 45.71 C
ATOM 14 N1 U B 4 0.097 24.581 8.611 1.00 45.94 N
ATOM 15 C2 U B 4 -0.561 24.739 7.388 1.00 46.42 C
ATOM 16 O2 U B 4 -0.255 24.114 6.376 1.00 46.37 O
ATOM 17 N3 U B 4 -1.584 25.654 7.392 1.00 47.02 N
ATOM 18 C4 U B 4 -2.017 26.423 8.467 1.00 49.19 C
ATOM 19 O4 U B 4 -2.951 27.230 8.301 1.00 49.70 O
ATOM 20 C5 U B 4 -1.287 26.208 9.693 1.00 47.15 C
ATOM 21 C6 U B 4 -0.280 25.318 9.720 1.00 47.08 C
TER
Atoms:
C4: (-4.089,24.026,10.182)
N3: (-3.184,23.601,11.135)
OP1: (-4.317,19.700,5.020)
OP2: (-2.103,19.636,3.708)
C2: (-2.228,22.625,10.990)
C1': (-1.212,20.954,9.508)
C3': (-0.860,18.959,8.279)
O5': (-2.156,20.218,6.123)
O4': (-0.464,21.299,8.366)
C5': (-0.721,20.332,6.150)
P: (-2.965,20.260,4.753)
C4': (-0.214,20.124,7.556)
C2': (-1.867,19.608,9.211)
O2': (-2.044,18.840,10.379)
N1: (-2.198,22.020,9.739)
O4: (-4.870,24.938,10.451)
O2: (-1.472,22.321,11.899)
C6: (-3.072,22.406,8.747)
C5: (-3.989,23.356,8.923)
O3': (0.111,18.212,8.967)
N3: (-3.184,23.601,11.135)
OP1: (-4.317,19.700,5.020)
OP2: (-2.103,19.636,3.708)
C2: (-2.228,22.625,10.990)
C1': (-1.212,20.954,9.508)
C3': (-0.860,18.959,8.279)
O5': (-2.156,20.218,6.123)
O4': (-0.464,21.299,8.366)
C5': (-0.721,20.332,6.150)
P: (-2.965,20.260,4.753)
C4': (-0.214,20.124,7.556)
C2': (-1.867,19.608,9.211)
O2': (-2.044,18.840,10.379)
N1: (-2.198,22.020,9.739)
O4: (-4.870,24.938,10.451)
O2: (-1.472,22.321,11.899)
C6: (-3.072,22.406,8.747)
C5: (-3.989,23.356,8.923)
O3': (0.111,18.212,8.967)
C4: (-2.017,26.423,8.467)
N3: (-1.584,25.654,7.392)
OP1: (0.912,19.316,13.594)
OP2: (1.631,21.666,14.308)
C2: (-0.561,24.739,7.388)
C1': (1.191,23.596,8.651)
C3': (3.376,23.567,9.600)
O5': (2.041,20.881,11.973)
O4': (1.188,22.901,9.881)
C5': (2.744,22.095,11.601)
P: (1.876,20.445,13.507)
C4': (2.532,22.417,10.127)
C2': (2.617,24.086,8.374)
O2': (3.080,23.552,7.146)
N1: (0.097,24.581,8.611)
O4: (-2.951,27.230,8.301)
O2: (-0.255,24.114,6.376)
C6: (-0.280,25.318,9.720)
C5: (-1.287,26.208,9.693)
O3': (4.752,23.226,9.442)
N3: (-1.584,25.654,7.392)
OP1: (0.912,19.316,13.594)
OP2: (1.631,21.666,14.308)
C2: (-0.561,24.739,7.388)
C1': (1.191,23.596,8.651)
C3': (3.376,23.567,9.600)
O5': (2.041,20.881,11.973)
O4': (1.188,22.901,9.881)
C5': (2.744,22.095,11.601)
P: (1.876,20.445,13.507)
C4': (2.532,22.417,10.127)
C2': (2.617,24.086,8.374)
O2': (3.080,23.552,7.146)
N1: (0.097,24.581,8.611)
O4: (-2.951,27.230,8.301)
O2: (-0.255,24.114,6.376)
C6: (-0.280,25.318,9.720)
C5: (-1.287,26.208,9.693)
O3': (4.752,23.226,9.442)
Image (generated by PyMOL):