Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02129:02373
Extra
PDB:
ATOM 1 O3' U A2128 69.667 94.811 95.574 1.00 42.39 O
ATOM 2 P G A2129 68.992 94.169 96.872 1.00 44.80 P
ATOM 3 OP1 G A2129 70.073 93.974 97.869 1.00 44.64 O
ATOM 4 OP2 G A2129 68.152 93.011 96.451 1.00 45.20 O
ATOM 5 O5' G A2129 68.013 95.303 97.390 1.00 42.60 O
ATOM 6 C5' G A2129 68.512 96.410 98.123 1.00 40.30 C
ATOM 7 C4' G A2129 67.461 97.484 98.211 1.00 41.96 C
ATOM 8 O4' G A2129 66.206 96.933 98.714 1.00 41.58 O
ATOM 9 C3' G A2129 67.841 98.598 99.170 1.00 41.75 C
ATOM 10 O3' G A2129 67.265 99.809 98.715 1.00 40.11 O
ATOM 11 C2' G A2129 67.177 98.151 100.462 1.00 41.85 C
ATOM 12 O2' G A2129 66.941 99.218 101.350 1.00 44.57 O
ATOM 13 C1' G A2129 65.867 97.579 99.926 1.00 42.60 C
ATOM 14 N9 G A2129 65.237 96.621 100.831 1.00 44.46 N
ATOM 15 C8 G A2129 64.268 96.907 101.764 1.00 45.04 C
ATOM 16 N7 G A2129 63.899 95.866 102.456 1.00 45.57 N
ATOM 17 C5 G A2129 64.666 94.825 101.952 1.00 44.33 C
ATOM 18 C6 G A2129 64.708 93.462 102.322 1.00 45.36 C
ATOM 19 O6 G A2129 64.063 92.887 103.211 1.00 47.52 O
ATOM 20 N1 G A2129 65.619 92.747 101.547 1.00 44.84 N
ATOM 21 C2 G A2129 66.397 93.282 100.549 1.00 44.63 C
ATOM 22 N2 G A2129 67.203 92.429 99.905 1.00 41.67 N
ATOM 23 N3 G A2129 66.379 94.561 100.206 1.00 45.04 N
ATOM 24 C4 G A2129 65.494 95.269 100.943 1.00 44.55 C
ATOM 25 P G A2130 68.199 101.079 98.455 1.00 40.65 P
ATOM 26 OP1 G A2130 69.565 100.802 98.989 1.00 40.68 O
ATOM 27 OP2 G A2130 67.437 102.255 98.958 1.00 38.90 O
ATOM 28 O5' G A2130 68.315 101.155 96.866 1.00 39.29 O
TER
ATOM 1 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 2 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 3 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 4 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 5 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
ATOM 6 C5' A B2373 60.143 101.146 101.092 1.00 39.94 C
ATOM 7 C4' A B2373 59.593 102.544 101.002 1.00 39.31 C
ATOM 8 O4' A B2373 60.482 103.430 101.744 1.00 39.31 O
ATOM 9 C3' A B2373 59.527 103.113 99.591 1.00 37.60 C
ATOM 10 O3' A B2373 58.444 104.057 99.528 1.00 36.81 O
ATOM 11 C2' A B2373 60.901 103.766 99.451 1.00 37.20 C
ATOM 12 O2' A B2373 60.970 104.748 98.441 1.00 34.75 O
ATOM 13 C1' A B2373 61.106 104.341 100.858 1.00 38.92 C
ATOM 14 N9 A B2373 62.503 104.490 101.280 1.00 39.52 N
ATOM 15 C8 A B2373 63.527 103.587 101.128 1.00 40.07 C
ATOM 16 N7 A B2373 64.676 104.004 101.600 1.00 39.00 N
ATOM 17 C5 A B2373 64.393 105.267 102.102 1.00 39.95 C
ATOM 18 C6 A B2373 65.200 106.242 102.738 1.00 40.95 C
ATOM 19 N6 A B2373 66.506 106.084 102.987 1.00 42.20 N
ATOM 20 N1 A B2373 64.611 107.397 103.112 1.00 39.28 N
ATOM 21 C2 A B2373 63.305 107.554 102.867 1.00 41.37 C
ATOM 22 N3 A B2373 62.444 106.717 102.281 1.00 42.39 N
ATOM 23 C4 A B2373 63.058 105.578 101.917 1.00 39.73 C
ATOM 24 P C B2374 57.344 103.939 98.361 1.00 38.73 P
ATOM 25 OP1 C B2374 57.610 102.669 97.628 1.00 39.59 O
ATOM 26 OP2 C B2374 57.304 105.228 97.620 1.00 37.20 O
ATOM 27 O5' C B2374 55.921 103.764 99.061 1.00 35.87 O
TER
ATOM 2 P G A2129 68.992 94.169 96.872 1.00 44.80 P
ATOM 3 OP1 G A2129 70.073 93.974 97.869 1.00 44.64 O
ATOM 4 OP2 G A2129 68.152 93.011 96.451 1.00 45.20 O
ATOM 5 O5' G A2129 68.013 95.303 97.390 1.00 42.60 O
ATOM 6 C5' G A2129 68.512 96.410 98.123 1.00 40.30 C
ATOM 7 C4' G A2129 67.461 97.484 98.211 1.00 41.96 C
ATOM 8 O4' G A2129 66.206 96.933 98.714 1.00 41.58 O
ATOM 9 C3' G A2129 67.841 98.598 99.170 1.00 41.75 C
ATOM 10 O3' G A2129 67.265 99.809 98.715 1.00 40.11 O
ATOM 11 C2' G A2129 67.177 98.151 100.462 1.00 41.85 C
ATOM 12 O2' G A2129 66.941 99.218 101.350 1.00 44.57 O
ATOM 13 C1' G A2129 65.867 97.579 99.926 1.00 42.60 C
ATOM 14 N9 G A2129 65.237 96.621 100.831 1.00 44.46 N
ATOM 15 C8 G A2129 64.268 96.907 101.764 1.00 45.04 C
ATOM 16 N7 G A2129 63.899 95.866 102.456 1.00 45.57 N
ATOM 17 C5 G A2129 64.666 94.825 101.952 1.00 44.33 C
ATOM 18 C6 G A2129 64.708 93.462 102.322 1.00 45.36 C
ATOM 19 O6 G A2129 64.063 92.887 103.211 1.00 47.52 O
ATOM 20 N1 G A2129 65.619 92.747 101.547 1.00 44.84 N
ATOM 21 C2 G A2129 66.397 93.282 100.549 1.00 44.63 C
ATOM 22 N2 G A2129 67.203 92.429 99.905 1.00 41.67 N
ATOM 23 N3 G A2129 66.379 94.561 100.206 1.00 45.04 N
ATOM 24 C4 G A2129 65.494 95.269 100.943 1.00 44.55 C
ATOM 25 P G A2130 68.199 101.079 98.455 1.00 40.65 P
ATOM 26 OP1 G A2130 69.565 100.802 98.989 1.00 40.68 O
ATOM 27 OP2 G A2130 67.437 102.255 98.958 1.00 38.90 O
ATOM 28 O5' G A2130 68.315 101.155 96.866 1.00 39.29 O
TER
ATOM 1 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 2 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 3 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 4 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 5 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
ATOM 6 C5' A B2373 60.143 101.146 101.092 1.00 39.94 C
ATOM 7 C4' A B2373 59.593 102.544 101.002 1.00 39.31 C
ATOM 8 O4' A B2373 60.482 103.430 101.744 1.00 39.31 O
ATOM 9 C3' A B2373 59.527 103.113 99.591 1.00 37.60 C
ATOM 10 O3' A B2373 58.444 104.057 99.528 1.00 36.81 O
ATOM 11 C2' A B2373 60.901 103.766 99.451 1.00 37.20 C
ATOM 12 O2' A B2373 60.970 104.748 98.441 1.00 34.75 O
ATOM 13 C1' A B2373 61.106 104.341 100.858 1.00 38.92 C
ATOM 14 N9 A B2373 62.503 104.490 101.280 1.00 39.52 N
ATOM 15 C8 A B2373 63.527 103.587 101.128 1.00 40.07 C
ATOM 16 N7 A B2373 64.676 104.004 101.600 1.00 39.00 N
ATOM 17 C5 A B2373 64.393 105.267 102.102 1.00 39.95 C
ATOM 18 C6 A B2373 65.200 106.242 102.738 1.00 40.95 C
ATOM 19 N6 A B2373 66.506 106.084 102.987 1.00 42.20 N
ATOM 20 N1 A B2373 64.611 107.397 103.112 1.00 39.28 N
ATOM 21 C2 A B2373 63.305 107.554 102.867 1.00 41.37 C
ATOM 22 N3 A B2373 62.444 106.717 102.281 1.00 42.39 N
ATOM 23 C4 A B2373 63.058 105.578 101.917 1.00 39.73 C
ATOM 24 P C B2374 57.344 103.939 98.361 1.00 38.73 P
ATOM 25 OP1 C B2374 57.610 102.669 97.628 1.00 39.59 O
ATOM 26 OP2 C B2374 57.304 105.228 97.620 1.00 37.20 O
ATOM 27 O5' C B2374 55.921 103.764 99.061 1.00 35.87 O
TER
Atoms:
OP1: (70.073,93.974,97.869)
OP2: (68.152,93.011,96.451)
C3': (67.841,98.598,99.170)
C1': (65.867,97.579,99.926)
C5': (68.512,96.410,98.123)
O6: (64.063,92.887,103.211)
O4': (66.206,96.933,98.714)
C8: (64.268,96.907,101.764)
C2: (66.397,93.282,100.549)
C6: (64.708,93.462,102.322)
C5: (64.666,94.825,101.952)
C4: (65.494,95.269,100.943)
P: (68.992,94.169,96.872)
C4': (67.461,97.484,98.211)
C2': (67.177,98.151,100.462)
O2': (66.941,99.218,101.350)
N1: (65.619,92.747,101.547)
N2: (67.203,92.429,99.905)
N3: (66.379,94.561,100.206)
N7: (63.899,95.866,102.456)
N9: (65.237,96.621,100.831)
O5': (68.013,95.303,97.390)
O3': (67.265,99.809,98.715)
OP2: (68.152,93.011,96.451)
C3': (67.841,98.598,99.170)
C1': (65.867,97.579,99.926)
C5': (68.512,96.410,98.123)
O6: (64.063,92.887,103.211)
O4': (66.206,96.933,98.714)
C8: (64.268,96.907,101.764)
C2: (66.397,93.282,100.549)
C6: (64.708,93.462,102.322)
C5: (64.666,94.825,101.952)
C4: (65.494,95.269,100.943)
P: (68.992,94.169,96.872)
C4': (67.461,97.484,98.211)
C2': (67.177,98.151,100.462)
O2': (66.941,99.218,101.350)
N1: (65.619,92.747,101.547)
N2: (67.203,92.429,99.905)
N3: (66.379,94.561,100.206)
N7: (63.899,95.866,102.456)
N9: (65.237,96.621,100.831)
O5': (68.013,95.303,97.390)
O3': (67.265,99.809,98.715)
OP1: (62.003,98.718,100.402)
OP2: (63.896,100.386,100.906)
C3': (59.527,103.113,99.591)
C1': (61.106,104.341,100.858)
C5': (60.143,101.146,101.092)
O4': (60.482,103.430,101.744)
C8: (63.527,103.587,101.128)
O2': (60.970,104.748,98.441)
C6: (65.200,106.242,102.738)
C5: (64.393,105.267,102.102)
C4: (63.058,105.578,101.917)
P: (62.493,99.942,101.097)
C4': (59.593,102.544,101.002)
C2': (60.901,103.766,99.451)
C2: (63.305,107.554,102.867)
N1: (64.611,107.397,103.112)
N3: (62.444,106.717,102.281)
N6: (66.506,106.084,102.987)
N7: (64.676,104.004,101.600)
N9: (62.503,104.490,101.280)
O5': (61.529,101.142,100.693)
O3': (58.444,104.057,99.528)
OP2: (63.896,100.386,100.906)
C3': (59.527,103.113,99.591)
C1': (61.106,104.341,100.858)
C5': (60.143,101.146,101.092)
O4': (60.482,103.430,101.744)
C8: (63.527,103.587,101.128)
O2': (60.970,104.748,98.441)
C6: (65.200,106.242,102.738)
C5: (64.393,105.267,102.102)
C4: (63.058,105.578,101.917)
P: (62.493,99.942,101.097)
C4': (59.593,102.544,101.002)
C2': (60.901,103.766,99.451)
C2: (63.305,107.554,102.867)
N1: (64.611,107.397,103.112)
N3: (62.444,106.717,102.281)
N6: (66.506,106.084,102.987)
N7: (64.676,104.004,101.600)
N9: (62.503,104.490,101.280)
O5': (61.529,101.142,100.693)
O3': (58.444,104.057,99.528)
Image (generated by PyMOL):