Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02129:02373
Extra
PDB:
ATOM 1 O3' U A2128 69.734 94.634 95.620 1.00 41.87 O
ATOM 2 P G A2129 69.017 93.990 96.897 1.00 43.08 P
ATOM 3 OP1 G A2129 70.061 93.837 97.940 1.00 44.43 O
ATOM 4 OP2 G A2129 68.216 92.815 96.473 1.00 43.48 O
ATOM 5 O5' G A2129 68.007 95.115 97.375 1.00 41.55 O
ATOM 6 C5' G A2129 68.470 96.198 98.171 1.00 39.96 C
ATOM 7 C4' G A2129 67.423 97.273 98.244 1.00 39.40 C
ATOM 8 O4' G A2129 66.179 96.716 98.756 1.00 39.81 O
ATOM 9 C3' G A2129 67.804 98.401 99.187 1.00 38.73 C
ATOM 10 O3' G A2129 67.265 99.625 98.714 1.00 36.87 O
ATOM 11 C2' G A2129 67.132 97.983 100.486 1.00 39.44 C
ATOM 12 O2' G A2129 66.878 99.087 101.322 1.00 40.87 O
ATOM 13 C1' G A2129 65.835 97.369 99.963 1.00 40.86 C
ATOM 14 N9 G A2129 65.223 96.408 100.883 1.00 42.30 N
ATOM 15 C8 G A2129 64.283 96.698 101.845 1.00 42.16 C
ATOM 16 N7 G A2129 63.933 95.659 102.551 1.00 42.32 N
ATOM 17 C5 G A2129 64.679 94.615 102.024 1.00 41.46 C
ATOM 18 C6 G A2129 64.728 93.255 102.397 1.00 41.93 C
ATOM 19 O6 G A2129 64.106 92.685 103.299 1.00 44.70 O
ATOM 20 N1 G A2129 65.615 92.535 101.602 1.00 40.52 N
ATOM 21 C2 G A2129 66.359 93.059 100.581 1.00 40.37 C
ATOM 22 N2 G A2129 67.140 92.197 99.921 1.00 38.56 N
ATOM 23 N3 G A2129 66.333 94.336 100.228 1.00 41.53 N
ATOM 24 C4 G A2129 65.474 95.052 100.987 1.00 41.52 C
ATOM 25 P G A2130 68.245 100.858 98.410 1.00 34.32 P
ATOM 26 OP1 G A2130 69.590 100.558 98.979 1.00 36.77 O
ATOM 27 OP2 G A2130 67.536 102.093 98.828 1.00 33.19 O
ATOM 28 O5' G A2130 68.380 100.853 96.825 1.00 32.99 O
TER
ATOM 1 O3' U B2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 2 P A B2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 3 OP1 A B2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 4 OP2 A B2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 5 O5' A B2373 61.587 100.872 100.651 1.00 36.66 O
ATOM 6 C5' A B2373 60.227 100.859 101.101 1.00 35.97 C
ATOM 7 C4' A B2373 59.650 102.246 101.004 1.00 35.75 C
ATOM 8 O4' A B2373 60.511 103.160 101.741 1.00 35.49 O
ATOM 9 C3' A B2373 59.571 102.809 99.594 1.00 33.72 C
ATOM 10 O3' A B2373 58.467 103.722 99.546 1.00 32.90 O
ATOM 11 C2' A B2373 60.928 103.492 99.444 1.00 33.40 C
ATOM 12 O2' A B2373 60.962 104.490 98.447 1.00 32.17 O
ATOM 13 C1' A B2373 61.131 104.067 100.849 1.00 34.69 C
ATOM 14 N9 A B2373 62.527 104.217 101.271 1.00 34.47 N
ATOM 15 C8 A B2373 63.553 103.318 101.124 1.00 34.69 C
ATOM 16 N7 A B2373 64.692 103.729 101.621 1.00 34.71 N
ATOM 17 C5 A B2373 64.401 104.986 102.129 1.00 35.31 C
ATOM 18 C6 A B2373 65.193 105.949 102.792 1.00 36.43 C
ATOM 19 N6 A B2373 66.487 105.779 103.078 1.00 36.63 N
ATOM 20 N1 A B2373 64.599 107.104 103.161 1.00 36.68 N
ATOM 21 C2 A B2373 63.297 107.268 102.886 1.00 38.13 C
ATOM 22 N3 A B2373 62.449 106.437 102.276 1.00 37.66 N
ATOM 23 C4 A B2373 63.071 105.301 101.918 1.00 35.03 C
ATOM 24 P C B2374 57.427 103.640 98.332 1.00 32.10 P
ATOM 25 OP1 C B2374 57.643 102.320 97.692 1.00 33.86 O
ATOM 26 OP2 C B2374 57.538 104.883 97.532 1.00 31.04 O
ATOM 27 O5' C B2374 55.960 103.606 98.952 1.00 30.75 O
TER
ATOM 2 P G A2129 69.017 93.990 96.897 1.00 43.08 P
ATOM 3 OP1 G A2129 70.061 93.837 97.940 1.00 44.43 O
ATOM 4 OP2 G A2129 68.216 92.815 96.473 1.00 43.48 O
ATOM 5 O5' G A2129 68.007 95.115 97.375 1.00 41.55 O
ATOM 6 C5' G A2129 68.470 96.198 98.171 1.00 39.96 C
ATOM 7 C4' G A2129 67.423 97.273 98.244 1.00 39.40 C
ATOM 8 O4' G A2129 66.179 96.716 98.756 1.00 39.81 O
ATOM 9 C3' G A2129 67.804 98.401 99.187 1.00 38.73 C
ATOM 10 O3' G A2129 67.265 99.625 98.714 1.00 36.87 O
ATOM 11 C2' G A2129 67.132 97.983 100.486 1.00 39.44 C
ATOM 12 O2' G A2129 66.878 99.087 101.322 1.00 40.87 O
ATOM 13 C1' G A2129 65.835 97.369 99.963 1.00 40.86 C
ATOM 14 N9 G A2129 65.223 96.408 100.883 1.00 42.30 N
ATOM 15 C8 G A2129 64.283 96.698 101.845 1.00 42.16 C
ATOM 16 N7 G A2129 63.933 95.659 102.551 1.00 42.32 N
ATOM 17 C5 G A2129 64.679 94.615 102.024 1.00 41.46 C
ATOM 18 C6 G A2129 64.728 93.255 102.397 1.00 41.93 C
ATOM 19 O6 G A2129 64.106 92.685 103.299 1.00 44.70 O
ATOM 20 N1 G A2129 65.615 92.535 101.602 1.00 40.52 N
ATOM 21 C2 G A2129 66.359 93.059 100.581 1.00 40.37 C
ATOM 22 N2 G A2129 67.140 92.197 99.921 1.00 38.56 N
ATOM 23 N3 G A2129 66.333 94.336 100.228 1.00 41.53 N
ATOM 24 C4 G A2129 65.474 95.052 100.987 1.00 41.52 C
ATOM 25 P G A2130 68.245 100.858 98.410 1.00 34.32 P
ATOM 26 OP1 G A2130 69.590 100.558 98.979 1.00 36.77 O
ATOM 27 OP2 G A2130 67.536 102.093 98.828 1.00 33.19 O
ATOM 28 O5' G A2130 68.380 100.853 96.825 1.00 32.99 O
TER
ATOM 1 O3' U B2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 2 P A B2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 3 OP1 A B2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 4 OP2 A B2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 5 O5' A B2373 61.587 100.872 100.651 1.00 36.66 O
ATOM 6 C5' A B2373 60.227 100.859 101.101 1.00 35.97 C
ATOM 7 C4' A B2373 59.650 102.246 101.004 1.00 35.75 C
ATOM 8 O4' A B2373 60.511 103.160 101.741 1.00 35.49 O
ATOM 9 C3' A B2373 59.571 102.809 99.594 1.00 33.72 C
ATOM 10 O3' A B2373 58.467 103.722 99.546 1.00 32.90 O
ATOM 11 C2' A B2373 60.928 103.492 99.444 1.00 33.40 C
ATOM 12 O2' A B2373 60.962 104.490 98.447 1.00 32.17 O
ATOM 13 C1' A B2373 61.131 104.067 100.849 1.00 34.69 C
ATOM 14 N9 A B2373 62.527 104.217 101.271 1.00 34.47 N
ATOM 15 C8 A B2373 63.553 103.318 101.124 1.00 34.69 C
ATOM 16 N7 A B2373 64.692 103.729 101.621 1.00 34.71 N
ATOM 17 C5 A B2373 64.401 104.986 102.129 1.00 35.31 C
ATOM 18 C6 A B2373 65.193 105.949 102.792 1.00 36.43 C
ATOM 19 N6 A B2373 66.487 105.779 103.078 1.00 36.63 N
ATOM 20 N1 A B2373 64.599 107.104 103.161 1.00 36.68 N
ATOM 21 C2 A B2373 63.297 107.268 102.886 1.00 38.13 C
ATOM 22 N3 A B2373 62.449 106.437 102.276 1.00 37.66 N
ATOM 23 C4 A B2373 63.071 105.301 101.918 1.00 35.03 C
ATOM 24 P C B2374 57.427 103.640 98.332 1.00 32.10 P
ATOM 25 OP1 C B2374 57.643 102.320 97.692 1.00 33.86 O
ATOM 26 OP2 C B2374 57.538 104.883 97.532 1.00 31.04 O
ATOM 27 O5' C B2374 55.960 103.606 98.952 1.00 30.75 O
TER
Atoms:
OP1: (70.061,93.837,97.940)
OP2: (68.216,92.815,96.473)
C3': (67.804,98.401,99.187)
C1': (65.835,97.369,99.963)
C5': (68.470,96.198,98.171)
O6: (64.106,92.685,103.299)
O4': (66.179,96.716,98.756)
C8: (64.283,96.698,101.845)
C2: (66.359,93.059,100.581)
C6: (64.728,93.255,102.397)
C5: (64.679,94.615,102.024)
C4: (65.474,95.052,100.987)
P: (69.017,93.990,96.897)
C4': (67.423,97.273,98.244)
C2': (67.132,97.983,100.486)
O2': (66.878,99.087,101.322)
N1: (65.615,92.535,101.602)
N2: (67.140,92.197,99.921)
N3: (66.333,94.336,100.228)
N7: (63.933,95.659,102.551)
N9: (65.223,96.408,100.883)
O5': (68.007,95.115,97.375)
O3': (67.265,99.625,98.714)
OP2: (68.216,92.815,96.473)
C3': (67.804,98.401,99.187)
C1': (65.835,97.369,99.963)
C5': (68.470,96.198,98.171)
O6: (64.106,92.685,103.299)
O4': (66.179,96.716,98.756)
C8: (64.283,96.698,101.845)
C2: (66.359,93.059,100.581)
C6: (64.728,93.255,102.397)
C5: (64.679,94.615,102.024)
C4: (65.474,95.052,100.987)
P: (69.017,93.990,96.897)
C4': (67.423,97.273,98.244)
C2': (67.132,97.983,100.486)
O2': (66.878,99.087,101.322)
N1: (65.615,92.535,101.602)
N2: (67.140,92.197,99.921)
N3: (66.333,94.336,100.228)
N7: (63.933,95.659,102.551)
N9: (65.223,96.408,100.883)
O5': (68.007,95.115,97.375)
O3': (67.265,99.625,98.714)
OP1: (62.245,98.488,100.424)
OP2: (63.986,100.304,100.966)
C3': (59.571,102.809,99.594)
C1': (61.131,104.067,100.849)
C5': (60.227,100.859,101.101)
O4': (60.511,103.160,101.741)
C8: (63.553,103.318,101.124)
O2': (60.962,104.490,98.447)
C6: (65.193,105.949,102.792)
C5: (64.401,104.986,102.129)
C4: (63.071,105.301,101.918)
P: (62.612,99.751,101.115)
C4': (59.650,102.246,101.004)
C2': (60.928,103.492,99.444)
C2: (63.297,107.268,102.886)
N1: (64.599,107.104,103.161)
N3: (62.449,106.437,102.276)
N6: (66.487,105.779,103.078)
N7: (64.692,103.729,101.621)
N9: (62.527,104.217,101.271)
O5': (61.587,100.872,100.651)
O3': (58.467,103.722,99.546)
OP2: (63.986,100.304,100.966)
C3': (59.571,102.809,99.594)
C1': (61.131,104.067,100.849)
C5': (60.227,100.859,101.101)
O4': (60.511,103.160,101.741)
C8: (63.553,103.318,101.124)
O2': (60.962,104.490,98.447)
C6: (65.193,105.949,102.792)
C5: (64.401,104.986,102.129)
C4: (63.071,105.301,101.918)
P: (62.612,99.751,101.115)
C4': (59.650,102.246,101.004)
C2': (60.928,103.492,99.444)
C2: (63.297,107.268,102.886)
N1: (64.599,107.104,103.161)
N3: (62.449,106.437,102.276)
N6: (66.487,105.779,103.078)
N7: (64.692,103.729,101.621)
N9: (62.527,104.217,101.271)
O5': (61.587,100.872,100.651)
O3': (58.467,103.722,99.546)
Image (generated by PyMOL):