ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01031:01029

Extra

PDB:
ATOM 1 O3' G A1030 35.063 101.070 89.985 1.00 34.78 O
ATOM 2 P G A1031 33.971 102.247 90.037 1.00 34.72 P
ATOM 3 OP1 G A1031 33.231 102.143 88.765 1.00 35.15 O
ATOM 4 OP2 G A1031 34.619 103.525 90.398 1.00 32.96 O
ATOM 5 O5' G A1031 33.026 101.838 91.249 1.00 35.77 O
ATOM 6 C5' G A1031 33.563 101.731 92.581 1.00 39.20 C
ATOM 7 C4' G A1031 32.511 101.226 93.538 1.00 39.18 C
ATOM 8 O4' G A1031 32.071 99.901 93.117 1.00 39.31 O
ATOM 9 C3' G A1031 32.972 101.075 94.988 1.00 38.94 C
ATOM 10 O3' G A1031 31.900 101.400 95.868 1.00 38.51 O
ATOM 11 C2' G A1031 33.301 99.589 95.080 1.00 37.87 C
ATOM 12 O2' G A1031 33.196 99.077 96.389 1.00 38.72 O
ATOM 13 C1' G A1031 32.220 98.992 94.190 1.00 37.11 C
ATOM 14 N9 G A1031 32.515 97.669 93.653 1.00 37.03 N
ATOM 15 C8 G A1031 33.749 97.133 93.375 1.00 38.52 C
ATOM 16 N7 G A1031 33.688 95.909 92.928 1.00 37.62 N
ATOM 17 C5 G A1031 32.332 95.621 92.906 1.00 37.10 C
ATOM 18 C6 G A1031 31.658 94.442 92.534 1.00 37.68 C
ATOM 19 O6 G A1031 32.139 93.371 92.148 1.00 39.88 O
ATOM 20 N1 G A1031 30.280 94.583 92.649 1.00 36.79 N
ATOM 21 C2 G A1031 29.635 95.713 93.070 1.00 35.50 C
ATOM 22 N2 G A1031 28.299 95.659 93.084 1.00 33.17 N
ATOM 23 N3 G A1031 30.254 96.815 93.443 1.00 36.01 N
ATOM 24 C4 G A1031 31.594 96.700 93.336 1.00 36.93 C
ATOM 25 P A A1032 32.099 102.536 96.986 1.00 41.53 P
ATOM 26 OP1 A A1032 33.262 103.383 96.606 1.00 41.30 O
ATOM 27 OP2 A A1032 32.067 101.881 98.316 1.00 38.39 O
ATOM 28 O5' A A1032 30.804 103.447 96.850 1.00 40.87 O
TER

ATOM 1 O3' C B1028 37.770 100.396 95.826 1.00 35.35 O
ATOM 2 P A B1029 37.497 100.786 94.303 1.00 35.65 P
ATOM 3 OP1 A B1029 37.023 102.190 94.312 1.00 34.79 O
ATOM 4 OP2 A B1029 36.643 99.735 93.715 1.00 34.46 O
ATOM 5 O5' A B1029 38.940 100.732 93.631 1.00 34.86 O
ATOM 6 C5' A B1029 39.919 101.768 93.879 1.00 34.56 C
ATOM 7 C4' A B1029 41.189 101.474 93.120 1.00 34.74 C
ATOM 8 O4' A B1029 41.699 100.182 93.528 1.00 35.94 O
ATOM 9 C3' A B1029 41.000 101.374 91.620 1.00 33.81 C
ATOM 10 O3' A B1029 41.179 102.655 91.058 1.00 35.44 O
ATOM 11 C2' A B1029 42.083 100.394 91.192 1.00 33.87 C
ATOM 12 O2' A B1029 43.357 100.970 91.034 1.00 33.14 O
ATOM 13 C1' A B1029 42.127 99.452 92.393 1.00 35.80 C
ATOM 14 N9 A B1029 41.250 98.295 92.261 1.00 38.01 N
ATOM 15 C8 A B1029 39.927 98.217 92.610 1.00 39.11 C
ATOM 16 N7 A B1029 39.395 97.046 92.386 1.00 41.47 N
ATOM 17 C5 A B1029 40.436 96.306 91.851 1.00 39.55 C
ATOM 18 C6 A B1029 40.508 95.000 91.404 1.00 40.80 C
ATOM 19 N6 A B1029 39.470 94.167 91.429 1.00 43.63 N
ATOM 20 N1 A B1029 41.690 94.562 90.923 1.00 40.62 N
ATOM 21 C2 A B1029 42.718 95.401 90.904 1.00 37.07 C
ATOM 22 N3 A B1029 42.774 96.658 91.300 1.00 39.02 N
ATOM 23 C4 A B1029 41.582 97.059 91.768 1.00 38.54 C
ATOM 24 P G B1030 40.555 102.987 89.626 1.00 38.89 P
ATOM 25 OP1 G B1030 41.263 102.142 88.623 1.00 36.90 O
ATOM 26 OP2 G B1030 40.510 104.460 89.447 1.00 38.30 O
ATOM 27 O5' G B1030 39.057 102.485 89.782 1.00 39.65 O
TER

Atoms:
OP1: (33.231,102.143,88.765)
OP2: (34.619,103.525,90.398)
C3': (32.972,101.075,94.988)
C1': (32.220,98.992,94.190)
C5': (33.563,101.731,92.581)
O6: (32.139,93.371,92.148)
O4': (32.071,99.901,93.117)
C8: (33.749,97.133,93.375)
C2: (29.635,95.713,93.070)
C6: (31.658,94.442,92.534)
C5: (32.332,95.621,92.906)
C4: (31.594,96.700,93.336)
P: (33.971,102.247,90.037)
C4': (32.511,101.226,93.538)
C2': (33.301,99.589,95.080)
O2': (33.196,99.077,96.389)
N1: (30.280,94.583,92.649)
N2: (28.299,95.659,93.084)
N3: (30.254,96.815,93.443)
N7: (33.688,95.909,92.928)
N9: (32.515,97.669,93.653)
O5': (33.026,101.838,91.249)
O3': (31.900,101.400,95.868)
OP1: (37.023,102.190,94.312)
OP2: (36.643,99.735,93.715)
C3': (41.000,101.374,91.620)
C1': (42.127,99.452,92.393)
C5': (39.919,101.768,93.879)
O4': (41.699,100.182,93.528)
C8: (39.927,98.217,92.610)
O2': (43.357,100.970,91.034)
C6: (40.508,95.000,91.404)
C5: (40.436,96.306,91.851)
C4: (41.582,97.059,91.768)
P: (37.497,100.786,94.303)
C4': (41.189,101.474,93.120)
C2': (42.083,100.394,91.192)
C2: (42.718,95.401,90.904)
N1: (41.690,94.562,90.923)
N3: (42.774,96.658,91.300)
N6: (39.470,94.167,91.429)
N7: (39.395,97.046,92.386)
N9: (41.250,98.295,92.261)
O5': (38.940,100.732,93.631)
O3': (41.179,102.655,91.058)
Image (generated by PyMOL):
PyMOL image
show in jmol