Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02129:02373
Extra
PDB:
ATOM 1 O3' U A2128 69.950 94.948 95.891 1.00 46.44 O
ATOM 2 P G A2129 69.203 94.338 97.161 1.00 49.35 P
ATOM 3 OP1 G A2129 70.221 94.165 98.231 1.00 50.40 O
ATOM 4 OP2 G A2129 68.399 93.175 96.705 1.00 49.71 O
ATOM 5 O5' G A2129 68.209 95.482 97.616 1.00 49.08 O
ATOM 6 C5' G A2129 68.658 96.495 98.511 1.00 50.29 C
ATOM 7 C4' G A2129 67.657 97.615 98.581 1.00 49.95 C
ATOM 8 O4' G A2129 66.389 97.116 99.098 1.00 48.75 O
ATOM 9 C3' G A2129 68.081 98.727 99.520 1.00 47.81 C
ATOM 10 O3' G A2129 67.537 99.949 99.039 1.00 47.20 O
ATOM 11 C2' G A2129 67.421 98.308 100.825 1.00 48.54 C
ATOM 12 O2' G A2129 67.234 99.384 101.714 1.00 50.07 O
ATOM 13 C1' G A2129 66.087 97.767 100.315 1.00 49.17 C
ATOM 14 N9 G A2129 65.444 96.808 101.214 1.00 49.68 N
ATOM 15 C8 G A2129 64.474 97.082 102.152 1.00 48.53 C
ATOM 16 N7 G A2129 64.095 96.027 102.820 1.00 48.06 N
ATOM 17 C5 G A2129 64.860 94.994 102.297 1.00 46.83 C
ATOM 18 C6 G A2129 64.896 93.630 102.637 1.00 46.60 C
ATOM 19 O6 G A2129 64.254 93.041 103.506 1.00 47.41 O
ATOM 20 N1 G A2129 65.804 92.927 101.850 1.00 47.28 N
ATOM 21 C2 G A2129 66.585 93.474 100.864 1.00 47.24 C
ATOM 22 N2 G A2129 67.386 92.627 100.203 1.00 44.46 N
ATOM 23 N3 G A2129 66.575 94.757 100.548 1.00 48.05 N
ATOM 24 C4 G A2129 65.692 95.454 101.299 1.00 48.36 C
ATOM 25 P G A2130 68.497 101.205 98.780 1.00 45.16 P
ATOM 26 OP1 G A2130 69.849 100.896 99.332 1.00 47.18 O
ATOM 27 OP2 G A2130 67.770 102.392 99.261 1.00 43.09 O
ATOM 28 O5' G A2130 68.613 101.311 97.192 1.00 43.42 O
TER
ATOM 1 O3' U B2372 62.485 99.904 103.091 1.00 41.27 O
ATOM 2 P A B2373 62.783 100.137 101.531 1.00 42.07 P
ATOM 3 OP1 A B2373 62.370 98.896 100.826 1.00 44.56 O
ATOM 4 OP2 A B2373 64.152 100.663 101.344 1.00 42.38 O
ATOM 5 O5' A B2373 61.779 101.289 101.106 1.00 41.91 O
ATOM 6 C5' A B2373 60.404 101.257 101.495 1.00 40.54 C
ATOM 7 C4' A B2373 59.827 102.637 101.374 1.00 39.37 C
ATOM 8 O4' A B2373 60.683 103.544 102.121 1.00 39.05 O
ATOM 9 C3' A B2373 59.792 103.188 99.956 1.00 37.26 C
ATOM 10 O3' A B2373 58.703 104.109 99.864 1.00 35.45 O
ATOM 11 C2' A B2373 61.153 103.862 99.834 1.00 37.28 C
ATOM 12 O2' A B2373 61.209 104.853 98.828 1.00 37.16 O
ATOM 13 C1' A B2373 61.325 104.442 101.240 1.00 39.02 C
ATOM 14 N9 A B2373 62.713 104.585 101.689 1.00 40.88 N
ATOM 15 C8 A B2373 63.747 103.698 101.525 1.00 41.72 C
ATOM 16 N7 A B2373 64.884 104.113 102.024 1.00 42.69 N
ATOM 17 C5 A B2373 64.582 105.359 102.556 1.00 42.83 C
ATOM 18 C6 A B2373 65.369 106.328 103.216 1.00 43.21 C
ATOM 19 N6 A B2373 66.676 106.194 103.449 1.00 43.79 N
ATOM 20 N1 A B2373 64.759 107.456 103.626 1.00 42.52 N
ATOM 21 C2 A B2373 63.455 107.603 103.376 1.00 44.41 C
ATOM 22 N3 A B2373 62.612 106.775 102.756 1.00 44.54 N
ATOM 23 C4 A B2373 63.246 105.657 102.365 1.00 42.38 C
ATOM 24 P C B2374 57.606 103.921 98.718 1.00 34.34 P
ATOM 25 OP1 C B2374 57.423 102.474 98.467 1.00 35.24 O
ATOM 26 OP2 C B2374 58.011 104.813 97.618 1.00 36.46 O
ATOM 27 O5' C B2374 56.245 104.516 99.288 1.00 35.81 O
TER
ATOM 2 P G A2129 69.203 94.338 97.161 1.00 49.35 P
ATOM 3 OP1 G A2129 70.221 94.165 98.231 1.00 50.40 O
ATOM 4 OP2 G A2129 68.399 93.175 96.705 1.00 49.71 O
ATOM 5 O5' G A2129 68.209 95.482 97.616 1.00 49.08 O
ATOM 6 C5' G A2129 68.658 96.495 98.511 1.00 50.29 C
ATOM 7 C4' G A2129 67.657 97.615 98.581 1.00 49.95 C
ATOM 8 O4' G A2129 66.389 97.116 99.098 1.00 48.75 O
ATOM 9 C3' G A2129 68.081 98.727 99.520 1.00 47.81 C
ATOM 10 O3' G A2129 67.537 99.949 99.039 1.00 47.20 O
ATOM 11 C2' G A2129 67.421 98.308 100.825 1.00 48.54 C
ATOM 12 O2' G A2129 67.234 99.384 101.714 1.00 50.07 O
ATOM 13 C1' G A2129 66.087 97.767 100.315 1.00 49.17 C
ATOM 14 N9 G A2129 65.444 96.808 101.214 1.00 49.68 N
ATOM 15 C8 G A2129 64.474 97.082 102.152 1.00 48.53 C
ATOM 16 N7 G A2129 64.095 96.027 102.820 1.00 48.06 N
ATOM 17 C5 G A2129 64.860 94.994 102.297 1.00 46.83 C
ATOM 18 C6 G A2129 64.896 93.630 102.637 1.00 46.60 C
ATOM 19 O6 G A2129 64.254 93.041 103.506 1.00 47.41 O
ATOM 20 N1 G A2129 65.804 92.927 101.850 1.00 47.28 N
ATOM 21 C2 G A2129 66.585 93.474 100.864 1.00 47.24 C
ATOM 22 N2 G A2129 67.386 92.627 100.203 1.00 44.46 N
ATOM 23 N3 G A2129 66.575 94.757 100.548 1.00 48.05 N
ATOM 24 C4 G A2129 65.692 95.454 101.299 1.00 48.36 C
ATOM 25 P G A2130 68.497 101.205 98.780 1.00 45.16 P
ATOM 26 OP1 G A2130 69.849 100.896 99.332 1.00 47.18 O
ATOM 27 OP2 G A2130 67.770 102.392 99.261 1.00 43.09 O
ATOM 28 O5' G A2130 68.613 101.311 97.192 1.00 43.42 O
TER
ATOM 1 O3' U B2372 62.485 99.904 103.091 1.00 41.27 O
ATOM 2 P A B2373 62.783 100.137 101.531 1.00 42.07 P
ATOM 3 OP1 A B2373 62.370 98.896 100.826 1.00 44.56 O
ATOM 4 OP2 A B2373 64.152 100.663 101.344 1.00 42.38 O
ATOM 5 O5' A B2373 61.779 101.289 101.106 1.00 41.91 O
ATOM 6 C5' A B2373 60.404 101.257 101.495 1.00 40.54 C
ATOM 7 C4' A B2373 59.827 102.637 101.374 1.00 39.37 C
ATOM 8 O4' A B2373 60.683 103.544 102.121 1.00 39.05 O
ATOM 9 C3' A B2373 59.792 103.188 99.956 1.00 37.26 C
ATOM 10 O3' A B2373 58.703 104.109 99.864 1.00 35.45 O
ATOM 11 C2' A B2373 61.153 103.862 99.834 1.00 37.28 C
ATOM 12 O2' A B2373 61.209 104.853 98.828 1.00 37.16 O
ATOM 13 C1' A B2373 61.325 104.442 101.240 1.00 39.02 C
ATOM 14 N9 A B2373 62.713 104.585 101.689 1.00 40.88 N
ATOM 15 C8 A B2373 63.747 103.698 101.525 1.00 41.72 C
ATOM 16 N7 A B2373 64.884 104.113 102.024 1.00 42.69 N
ATOM 17 C5 A B2373 64.582 105.359 102.556 1.00 42.83 C
ATOM 18 C6 A B2373 65.369 106.328 103.216 1.00 43.21 C
ATOM 19 N6 A B2373 66.676 106.194 103.449 1.00 43.79 N
ATOM 20 N1 A B2373 64.759 107.456 103.626 1.00 42.52 N
ATOM 21 C2 A B2373 63.455 107.603 103.376 1.00 44.41 C
ATOM 22 N3 A B2373 62.612 106.775 102.756 1.00 44.54 N
ATOM 23 C4 A B2373 63.246 105.657 102.365 1.00 42.38 C
ATOM 24 P C B2374 57.606 103.921 98.718 1.00 34.34 P
ATOM 25 OP1 C B2374 57.423 102.474 98.467 1.00 35.24 O
ATOM 26 OP2 C B2374 58.011 104.813 97.618 1.00 36.46 O
ATOM 27 O5' C B2374 56.245 104.516 99.288 1.00 35.81 O
TER
Atoms:
OP1: (70.221,94.165,98.231)
OP2: (68.399,93.175,96.705)
C3': (68.081,98.727,99.520)
C1': (66.087,97.767,100.315)
C5': (68.658,96.495,98.511)
O6: (64.254,93.041,103.506)
O4': (66.389,97.116,99.098)
C8: (64.474,97.082,102.152)
C2: (66.585,93.474,100.864)
C6: (64.896,93.630,102.637)
C5: (64.860,94.994,102.297)
C4: (65.692,95.454,101.299)
P: (69.203,94.338,97.161)
C4': (67.657,97.615,98.581)
C2': (67.421,98.308,100.825)
O2': (67.234,99.384,101.714)
N1: (65.804,92.927,101.850)
N2: (67.386,92.627,100.203)
N3: (66.575,94.757,100.548)
N7: (64.095,96.027,102.820)
N9: (65.444,96.808,101.214)
O5': (68.209,95.482,97.616)
O3': (67.537,99.949,99.039)
OP2: (68.399,93.175,96.705)
C3': (68.081,98.727,99.520)
C1': (66.087,97.767,100.315)
C5': (68.658,96.495,98.511)
O6: (64.254,93.041,103.506)
O4': (66.389,97.116,99.098)
C8: (64.474,97.082,102.152)
C2: (66.585,93.474,100.864)
C6: (64.896,93.630,102.637)
C5: (64.860,94.994,102.297)
C4: (65.692,95.454,101.299)
P: (69.203,94.338,97.161)
C4': (67.657,97.615,98.581)
C2': (67.421,98.308,100.825)
O2': (67.234,99.384,101.714)
N1: (65.804,92.927,101.850)
N2: (67.386,92.627,100.203)
N3: (66.575,94.757,100.548)
N7: (64.095,96.027,102.820)
N9: (65.444,96.808,101.214)
O5': (68.209,95.482,97.616)
O3': (67.537,99.949,99.039)
OP1: (62.370,98.896,100.826)
OP2: (64.152,100.663,101.344)
C3': (59.792,103.188,99.956)
C1': (61.325,104.442,101.240)
C5': (60.404,101.257,101.495)
O4': (60.683,103.544,102.121)
C8: (63.747,103.698,101.525)
O2': (61.209,104.853,98.828)
C6: (65.369,106.328,103.216)
C5: (64.582,105.359,102.556)
C4: (63.246,105.657,102.365)
P: (62.783,100.137,101.531)
C4': (59.827,102.637,101.374)
C2': (61.153,103.862,99.834)
C2: (63.455,107.603,103.376)
N1: (64.759,107.456,103.626)
N3: (62.612,106.775,102.756)
N6: (66.676,106.194,103.449)
N7: (64.884,104.113,102.024)
N9: (62.713,104.585,101.689)
O5': (61.779,101.289,101.106)
O3': (58.703,104.109,99.864)
OP2: (64.152,100.663,101.344)
C3': (59.792,103.188,99.956)
C1': (61.325,104.442,101.240)
C5': (60.404,101.257,101.495)
O4': (60.683,103.544,102.121)
C8: (63.747,103.698,101.525)
O2': (61.209,104.853,98.828)
C6: (65.369,106.328,103.216)
C5: (64.582,105.359,102.556)
C4: (63.246,105.657,102.365)
P: (62.783,100.137,101.531)
C4': (59.827,102.637,101.374)
C2': (61.153,103.862,99.834)
C2: (63.455,107.603,103.376)
N1: (64.759,107.456,103.626)
N3: (62.612,106.775,102.756)
N6: (66.676,106.194,103.449)
N7: (64.884,104.113,102.024)
N9: (62.713,104.585,101.689)
O5': (61.779,101.289,101.106)
O3': (58.703,104.109,99.864)
Image (generated by PyMOL):