ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01031:01029

Extra

PDB:
ATOM 1 O3' G A1030 34.864 100.872 89.566 1.00 33.23 O
ATOM 2 P G A1031 33.785 102.049 89.679 1.00 31.00 P
ATOM 3 OP1 G A1031 32.996 102.016 88.430 1.00 31.66 O
ATOM 4 OP2 G A1031 34.485 103.293 90.073 1.00 27.62 O
ATOM 5 O5' G A1031 32.862 101.572 90.879 1.00 30.86 O
ATOM 6 C5' G A1031 33.430 101.324 92.172 1.00 31.87 C
ATOM 7 C4' G A1031 32.359 100.893 93.135 1.00 31.86 C
ATOM 8 O4' G A1031 31.895 99.564 92.765 1.00 30.86 O
ATOM 9 C3' G A1031 32.808 100.796 94.588 1.00 32.78 C
ATOM 10 O3' G A1031 31.731 101.172 95.436 1.00 32.87 O
ATOM 11 C2' G A1031 33.134 99.316 94.739 1.00 31.74 C
ATOM 12 O2' G A1031 33.034 98.878 96.078 1.00 31.71 O
ATOM 13 C1' G A1031 32.068 98.681 93.850 1.00 30.83 C
ATOM 14 N9 G A1031 32.409 97.366 93.317 1.00 31.54 N
ATOM 15 C8 G A1031 33.663 96.850 93.097 1.00 32.22 C
ATOM 16 N7 G A1031 33.642 95.631 92.635 1.00 30.87 N
ATOM 17 C5 G A1031 32.294 95.326 92.539 1.00 31.77 C
ATOM 18 C6 G A1031 31.653 94.138 92.116 1.00 32.74 C
ATOM 19 O6 G A1031 32.168 93.079 91.719 1.00 33.64 O
ATOM 20 N1 G A1031 30.267 94.254 92.189 1.00 31.15 N
ATOM 21 C2 G A1031 29.589 95.367 92.612 1.00 29.05 C
ATOM 22 N2 G A1031 28.261 95.279 92.619 1.00 24.99 N
ATOM 23 N3 G A1031 30.175 96.481 93.004 1.00 30.98 N
ATOM 24 C4 G A1031 31.520 96.390 92.946 1.00 31.58 C
ATOM 25 P A A1032 31.940 102.323 96.532 1.00 35.40 P
ATOM 26 OP1 A A1032 33.093 103.178 96.137 1.00 36.33 O
ATOM 27 OP2 A A1032 31.935 101.659 97.850 1.00 34.98 O
ATOM 28 O5' A A1032 30.623 103.207 96.419 1.00 34.63 O
TER

ATOM 1 O3' C B1028 37.513 100.212 95.460 1.00 31.81 O
ATOM 2 P A B1029 37.186 100.604 93.940 1.00 32.33 P
ATOM 3 OP1 A B1029 36.620 101.970 93.973 1.00 30.47 O
ATOM 4 OP2 A B1029 36.400 99.513 93.324 1.00 32.54 O
ATOM 5 O5' A B1029 38.616 100.610 93.229 1.00 31.66 O
ATOM 6 C5' A B1029 39.611 101.623 93.509 1.00 30.45 C
ATOM 7 C4' A B1029 40.892 101.307 92.766 1.00 30.86 C
ATOM 8 O4' A B1029 41.362 99.995 93.163 1.00 32.26 O
ATOM 9 C3' A B1029 40.736 101.238 91.258 1.00 31.01 C
ATOM 10 O3' A B1029 40.961 102.527 90.715 1.00 31.45 O
ATOM 11 C2' A B1029 41.805 100.240 90.832 1.00 31.45 C
ATOM 12 O2' A B1029 43.077 100.815 90.658 1.00 31.27 O
ATOM 13 C1' A B1029 41.835 99.285 92.028 1.00 32.97 C
ATOM 14 N9 A B1029 41.012 98.082 91.869 1.00 33.61 N
ATOM 15 C8 A B1029 39.685 97.935 92.192 1.00 35.11 C
ATOM 16 N7 A B1029 39.212 96.744 91.944 1.00 35.78 N
ATOM 17 C5 A B1029 40.299 96.057 91.426 1.00 33.87 C
ATOM 18 C6 A B1029 40.445 94.743 90.972 1.00 34.71 C
ATOM 19 N6 A B1029 39.459 93.847 90.988 1.00 35.79 N
ATOM 20 N1 A B1029 41.654 94.370 90.503 1.00 34.62 N
ATOM 21 C2 A B1029 42.641 95.265 90.510 1.00 33.84 C
ATOM 22 N3 A B1029 42.628 96.528 90.924 1.00 33.58 N
ATOM 23 C4 A B1029 41.411 96.867 91.372 1.00 32.26 C
ATOM 24 P G B1030 40.299 102.939 89.318 1.00 32.84 P
ATOM 25 OP1 G B1030 41.069 102.293 88.229 1.00 29.67 O
ATOM 26 OP2 G B1030 40.113 104.419 89.326 1.00 29.57 O
ATOM 27 O5' G B1030 38.863 102.268 89.362 1.00 33.59 O
TER

Atoms:
OP1: (32.996,102.016,88.430)
OP2: (34.485,103.293,90.073)
C3': (32.808,100.796,94.588)
C1': (32.068,98.681,93.850)
C5': (33.430,101.324,92.172)
O6: (32.168,93.079,91.719)
O4': (31.895,99.564,92.765)
C8: (33.663,96.850,93.097)
C2: (29.589,95.367,92.612)
C6: (31.653,94.138,92.116)
C5: (32.294,95.326,92.539)
C4: (31.520,96.390,92.946)
P: (33.785,102.049,89.679)
C4': (32.359,100.893,93.135)
C2': (33.134,99.316,94.739)
O2': (33.034,98.878,96.078)
N1: (30.267,94.254,92.189)
N2: (28.261,95.279,92.619)
N3: (30.175,96.481,93.004)
N7: (33.642,95.631,92.635)
N9: (32.409,97.366,93.317)
O5': (32.862,101.572,90.879)
O3': (31.731,101.172,95.436)
OP1: (36.620,101.970,93.973)
OP2: (36.400,99.513,93.324)
C3': (40.736,101.238,91.258)
C1': (41.835,99.285,92.028)
C5': (39.611,101.623,93.509)
O4': (41.362,99.995,93.163)
C8: (39.685,97.935,92.192)
O2': (43.077,100.815,90.658)
C6: (40.445,94.743,90.972)
C5: (40.299,96.057,91.426)
C4: (41.411,96.867,91.372)
P: (37.186,100.604,93.940)
C4': (40.892,101.307,92.766)
C2': (41.805,100.240,90.832)
C2: (42.641,95.265,90.510)
N1: (41.654,94.370,90.503)
N3: (42.628,96.528,90.924)
N6: (39.459,93.847,90.988)
N7: (39.212,96.744,91.944)
N9: (41.012,98.082,91.869)
O5': (38.616,100.610,93.229)
O3': (40.961,102.527,90.715)
Image (generated by PyMOL):
PyMOL image
show in jmol