Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02129:02373
Extra
PDB:
ATOM 1 O3' U A2128 69.712 94.770 95.585 1.00 48.82 O
ATOM 2 P G A2129 68.978 94.127 96.853 1.00 50.79 P
ATOM 3 OP1 G A2129 70.010 93.920 97.901 1.00 51.77 O
ATOM 4 OP2 G A2129 68.156 92.978 96.383 1.00 51.25 O
ATOM 5 O5' G A2129 67.992 95.268 97.347 1.00 48.42 O
ATOM 6 C5' G A2129 68.488 96.379 98.087 1.00 46.78 C
ATOM 7 C4' G A2129 67.441 97.453 98.160 1.00 46.88 C
ATOM 8 O4' G A2129 66.201 96.887 98.678 1.00 47.24 O
ATOM 9 C3' G A2129 67.808 98.597 99.091 1.00 45.64 C
ATOM 10 O3' G A2129 67.253 99.809 98.599 1.00 43.17 O
ATOM 11 C2' G A2129 67.139 98.181 100.395 1.00 46.74 C
ATOM 12 O2' G A2129 66.865 99.275 101.240 1.00 48.17 O
ATOM 13 C1' G A2129 65.850 97.544 99.881 1.00 47.51 C
ATOM 14 N9 G A2129 65.271 96.574 100.814 1.00 48.43 N
ATOM 15 C8 G A2129 64.378 96.853 101.822 1.00 48.21 C
ATOM 16 N7 G A2129 64.050 95.804 102.523 1.00 47.85 N
ATOM 17 C5 G A2129 64.758 94.765 101.943 1.00 47.80 C
ATOM 18 C6 G A2129 64.805 93.399 102.286 1.00 48.79 C
ATOM 19 O6 G A2129 64.203 92.815 103.197 1.00 49.76 O
ATOM 20 N1 G A2129 65.660 92.690 101.444 1.00 49.31 N
ATOM 21 C2 G A2129 66.375 93.232 100.401 1.00 48.21 C
ATOM 22 N2 G A2129 67.147 92.383 99.706 1.00 46.19 N
ATOM 23 N3 G A2129 66.335 94.511 100.069 1.00 48.11 N
ATOM 24 C4 G A2129 65.514 95.217 100.880 1.00 48.06 C
ATOM 25 P G A2130 68.192 101.096 98.410 1.00 39.65 P
ATOM 26 OP1 G A2130 69.536 100.813 98.980 1.00 41.30 O
ATOM 27 OP2 G A2130 67.424 102.254 98.906 1.00 38.31 O
ATOM 28 O5' G A2130 68.351 101.231 96.827 1.00 40.53 O
TER
ATOM 1 O3' U B2372 62.227 99.677 102.766 1.00 38.89 O
ATOM 2 P A B2373 62.540 99.901 101.215 1.00 40.76 P
ATOM 3 OP1 A B2373 62.098 98.673 100.517 1.00 43.28 O
ATOM 4 OP2 A B2373 63.931 100.377 101.051 1.00 40.50 O
ATOM 5 O5' A B2373 61.562 101.073 100.779 1.00 39.65 O
ATOM 6 C5' A B2373 60.175 101.042 101.132 1.00 39.66 C
ATOM 7 C4' A B2373 59.592 102.426 101.010 1.00 40.18 C
ATOM 8 O4' A B2373 60.457 103.348 101.727 1.00 40.37 O
ATOM 9 C3' A B2373 59.504 102.971 99.594 1.00 37.70 C
ATOM 10 O3' A B2373 58.433 103.922 99.557 1.00 36.27 O
ATOM 11 C2' A B2373 60.866 103.631 99.425 1.00 38.16 C
ATOM 12 O2' A B2373 60.886 104.610 98.411 1.00 37.87 O
ATOM 13 C1' A B2373 61.070 104.235 100.817 1.00 39.84 C
ATOM 14 N9 A B2373 62.461 104.402 101.238 1.00 40.63 N
ATOM 15 C8 A B2373 63.514 103.543 101.046 1.00 41.02 C
ATOM 16 N7 A B2373 64.647 103.979 101.537 1.00 42.09 N
ATOM 17 C5 A B2373 64.320 105.208 102.092 1.00 41.91 C
ATOM 18 C6 A B2373 65.089 106.180 102.760 1.00 41.38 C
ATOM 19 N6 A B2373 66.398 106.062 102.989 1.00 42.46 N
ATOM 20 N1 A B2373 64.460 107.293 103.186 1.00 40.95 N
ATOM 21 C2 A B2373 63.150 107.414 102.953 1.00 41.95 C
ATOM 22 N3 A B2373 62.320 106.574 102.335 1.00 42.70 N
ATOM 23 C4 A B2373 62.976 105.478 101.922 1.00 41.77 C
ATOM 24 P C B2374 57.405 103.920 98.327 1.00 36.13 P
ATOM 25 OP1 C B2374 57.714 102.702 97.530 1.00 38.79 O
ATOM 26 OP2 C B2374 57.412 105.254 97.680 1.00 33.24 O
ATOM 27 O5' C B2374 55.954 103.700 98.945 1.00 34.71 O
TER
ATOM 2 P G A2129 68.978 94.127 96.853 1.00 50.79 P
ATOM 3 OP1 G A2129 70.010 93.920 97.901 1.00 51.77 O
ATOM 4 OP2 G A2129 68.156 92.978 96.383 1.00 51.25 O
ATOM 5 O5' G A2129 67.992 95.268 97.347 1.00 48.42 O
ATOM 6 C5' G A2129 68.488 96.379 98.087 1.00 46.78 C
ATOM 7 C4' G A2129 67.441 97.453 98.160 1.00 46.88 C
ATOM 8 O4' G A2129 66.201 96.887 98.678 1.00 47.24 O
ATOM 9 C3' G A2129 67.808 98.597 99.091 1.00 45.64 C
ATOM 10 O3' G A2129 67.253 99.809 98.599 1.00 43.17 O
ATOM 11 C2' G A2129 67.139 98.181 100.395 1.00 46.74 C
ATOM 12 O2' G A2129 66.865 99.275 101.240 1.00 48.17 O
ATOM 13 C1' G A2129 65.850 97.544 99.881 1.00 47.51 C
ATOM 14 N9 G A2129 65.271 96.574 100.814 1.00 48.43 N
ATOM 15 C8 G A2129 64.378 96.853 101.822 1.00 48.21 C
ATOM 16 N7 G A2129 64.050 95.804 102.523 1.00 47.85 N
ATOM 17 C5 G A2129 64.758 94.765 101.943 1.00 47.80 C
ATOM 18 C6 G A2129 64.805 93.399 102.286 1.00 48.79 C
ATOM 19 O6 G A2129 64.203 92.815 103.197 1.00 49.76 O
ATOM 20 N1 G A2129 65.660 92.690 101.444 1.00 49.31 N
ATOM 21 C2 G A2129 66.375 93.232 100.401 1.00 48.21 C
ATOM 22 N2 G A2129 67.147 92.383 99.706 1.00 46.19 N
ATOM 23 N3 G A2129 66.335 94.511 100.069 1.00 48.11 N
ATOM 24 C4 G A2129 65.514 95.217 100.880 1.00 48.06 C
ATOM 25 P G A2130 68.192 101.096 98.410 1.00 39.65 P
ATOM 26 OP1 G A2130 69.536 100.813 98.980 1.00 41.30 O
ATOM 27 OP2 G A2130 67.424 102.254 98.906 1.00 38.31 O
ATOM 28 O5' G A2130 68.351 101.231 96.827 1.00 40.53 O
TER
ATOM 1 O3' U B2372 62.227 99.677 102.766 1.00 38.89 O
ATOM 2 P A B2373 62.540 99.901 101.215 1.00 40.76 P
ATOM 3 OP1 A B2373 62.098 98.673 100.517 1.00 43.28 O
ATOM 4 OP2 A B2373 63.931 100.377 101.051 1.00 40.50 O
ATOM 5 O5' A B2373 61.562 101.073 100.779 1.00 39.65 O
ATOM 6 C5' A B2373 60.175 101.042 101.132 1.00 39.66 C
ATOM 7 C4' A B2373 59.592 102.426 101.010 1.00 40.18 C
ATOM 8 O4' A B2373 60.457 103.348 101.727 1.00 40.37 O
ATOM 9 C3' A B2373 59.504 102.971 99.594 1.00 37.70 C
ATOM 10 O3' A B2373 58.433 103.922 99.557 1.00 36.27 O
ATOM 11 C2' A B2373 60.866 103.631 99.425 1.00 38.16 C
ATOM 12 O2' A B2373 60.886 104.610 98.411 1.00 37.87 O
ATOM 13 C1' A B2373 61.070 104.235 100.817 1.00 39.84 C
ATOM 14 N9 A B2373 62.461 104.402 101.238 1.00 40.63 N
ATOM 15 C8 A B2373 63.514 103.543 101.046 1.00 41.02 C
ATOM 16 N7 A B2373 64.647 103.979 101.537 1.00 42.09 N
ATOM 17 C5 A B2373 64.320 105.208 102.092 1.00 41.91 C
ATOM 18 C6 A B2373 65.089 106.180 102.760 1.00 41.38 C
ATOM 19 N6 A B2373 66.398 106.062 102.989 1.00 42.46 N
ATOM 20 N1 A B2373 64.460 107.293 103.186 1.00 40.95 N
ATOM 21 C2 A B2373 63.150 107.414 102.953 1.00 41.95 C
ATOM 22 N3 A B2373 62.320 106.574 102.335 1.00 42.70 N
ATOM 23 C4 A B2373 62.976 105.478 101.922 1.00 41.77 C
ATOM 24 P C B2374 57.405 103.920 98.327 1.00 36.13 P
ATOM 25 OP1 C B2374 57.714 102.702 97.530 1.00 38.79 O
ATOM 26 OP2 C B2374 57.412 105.254 97.680 1.00 33.24 O
ATOM 27 O5' C B2374 55.954 103.700 98.945 1.00 34.71 O
TER
Atoms:
OP1: (70.010,93.920,97.901)
OP2: (68.156,92.978,96.383)
C3': (67.808,98.597,99.091)
C1': (65.850,97.544,99.881)
C5': (68.488,96.379,98.087)
O6: (64.203,92.815,103.197)
O4': (66.201,96.887,98.678)
C8: (64.378,96.853,101.822)
C2: (66.375,93.232,100.401)
C6: (64.805,93.399,102.286)
C5: (64.758,94.765,101.943)
C4: (65.514,95.217,100.880)
P: (68.978,94.127,96.853)
C4': (67.441,97.453,98.160)
C2': (67.139,98.181,100.395)
O2': (66.865,99.275,101.240)
N1: (65.660,92.690,101.444)
N2: (67.147,92.383,99.706)
N3: (66.335,94.511,100.069)
N7: (64.050,95.804,102.523)
N9: (65.271,96.574,100.814)
O5': (67.992,95.268,97.347)
O3': (67.253,99.809,98.599)
OP2: (68.156,92.978,96.383)
C3': (67.808,98.597,99.091)
C1': (65.850,97.544,99.881)
C5': (68.488,96.379,98.087)
O6: (64.203,92.815,103.197)
O4': (66.201,96.887,98.678)
C8: (64.378,96.853,101.822)
C2: (66.375,93.232,100.401)
C6: (64.805,93.399,102.286)
C5: (64.758,94.765,101.943)
C4: (65.514,95.217,100.880)
P: (68.978,94.127,96.853)
C4': (67.441,97.453,98.160)
C2': (67.139,98.181,100.395)
O2': (66.865,99.275,101.240)
N1: (65.660,92.690,101.444)
N2: (67.147,92.383,99.706)
N3: (66.335,94.511,100.069)
N7: (64.050,95.804,102.523)
N9: (65.271,96.574,100.814)
O5': (67.992,95.268,97.347)
O3': (67.253,99.809,98.599)
OP1: (62.098,98.673,100.517)
OP2: (63.931,100.377,101.051)
C3': (59.504,102.971,99.594)
C1': (61.070,104.235,100.817)
C5': (60.175,101.042,101.132)
O4': (60.457,103.348,101.727)
C8: (63.514,103.543,101.046)
O2': (60.886,104.610,98.411)
C6: (65.089,106.180,102.760)
C5: (64.320,105.208,102.092)
C4: (62.976,105.478,101.922)
P: (62.540,99.901,101.215)
C4': (59.592,102.426,101.010)
C2': (60.866,103.631,99.425)
C2: (63.150,107.414,102.953)
N1: (64.460,107.293,103.186)
N3: (62.320,106.574,102.335)
N6: (66.398,106.062,102.989)
N7: (64.647,103.979,101.537)
N9: (62.461,104.402,101.238)
O5': (61.562,101.073,100.779)
O3': (58.433,103.922,99.557)
OP2: (63.931,100.377,101.051)
C3': (59.504,102.971,99.594)
C1': (61.070,104.235,100.817)
C5': (60.175,101.042,101.132)
O4': (60.457,103.348,101.727)
C8: (63.514,103.543,101.046)
O2': (60.886,104.610,98.411)
C6: (65.089,106.180,102.760)
C5: (64.320,105.208,102.092)
C4: (62.976,105.478,101.922)
P: (62.540,99.901,101.215)
C4': (59.592,102.426,101.010)
C2': (60.866,103.631,99.425)
C2: (63.150,107.414,102.953)
N1: (64.460,107.293,103.186)
N3: (62.320,106.574,102.335)
N6: (66.398,106.062,102.989)
N7: (64.647,103.979,101.537)
N9: (62.461,104.402,101.238)
O5': (61.562,101.073,100.779)
O3': (58.433,103.922,99.557)
Image (generated by PyMOL):