ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0807:0844

Extra

PDB:
ATOM 1 O3' A A 806 112.391 152.513 86.593 1.00 43.63 O
ATOM 2 P G A 807 112.244 150.989 86.107 1.00 44.39 P
ATOM 3 OP1 G A 807 112.181 150.156 87.334 1.00 43.10 O
ATOM 4 OP2 G A 807 113.296 150.714 85.103 1.00 42.34 O
ATOM 5 O5' G A 807 110.823 150.977 85.375 1.00 43.66 O
ATOM 6 C5' G A 807 109.591 150.956 86.139 1.00 42.65 C
ATOM 7 C4' G A 807 108.398 150.767 85.228 1.00 41.46 C
ATOM 8 O4' G A 807 108.747 149.831 84.191 1.00 40.70 O
ATOM 9 C3' G A 807 107.160 150.174 85.891 1.00 41.10 C
ATOM 10 O3' G A 807 106.320 151.211 86.409 1.00 41.41 O
ATOM 11 C2' G A 807 106.440 149.486 84.730 1.00 41.53 C
ATOM 12 O2' G A 807 105.568 150.351 84.037 1.00 43.63 O
ATOM 13 C1' G A 807 107.597 149.123 83.792 1.00 40.55 C
ATOM 14 N9 G A 807 107.961 147.719 83.638 1.00 39.29 N
ATOM 15 C8 G A 807 108.083 147.032 82.451 1.00 39.32 C
ATOM 16 N7 G A 807 108.491 145.803 82.611 1.00 37.06 N
ATOM 17 C5 G A 807 108.630 145.667 83.985 1.00 35.67 C
ATOM 18 C6 G A 807 109.048 144.562 84.749 1.00 35.42 C
ATOM 19 O6 G A 807 109.383 143.442 84.353 1.00 37.31 O
ATOM 20 N1 G A 807 109.059 144.854 86.107 1.00 31.86 N
ATOM 21 C2 G A 807 108.707 146.059 86.651 1.00 33.16 C
ATOM 22 N2 G A 807 108.795 146.154 87.970 1.00 34.53 N
ATOM 23 N3 G A 807 108.304 147.097 85.949 1.00 33.83 N
ATOM 24 C4 G A 807 108.294 146.835 84.632 1.00 36.00 C
ATOM 25 P U A 808 106.329 151.566 87.976 1.00 43.44 P
ATOM 26 OP1 U A 808 106.356 150.318 88.780 1.00 41.86 O
ATOM 27 OP2 U A 808 105.238 152.538 88.193 1.00 44.03 O
ATOM 28 O5' U A 808 107.685 152.380 88.177 1.00 45.10 O
TER

ATOM 1 O3' G B 843 106.810 150.491 80.694 1.00 39.06 O
ATOM 2 P A B 844 107.407 149.727 79.416 1.00 39.75 P
ATOM 3 OP1 A B 844 108.706 149.104 79.769 1.00 38.35 O
ATOM 4 OP2 A B 844 107.326 150.650 78.263 1.00 39.24 O
ATOM 5 O5' A B 844 106.366 148.551 79.178 1.00 39.60 O
ATOM 6 C5' A B 844 106.193 147.989 77.871 1.00 37.49 C
ATOM 7 C4' A B 844 104.966 147.117 77.826 1.00 34.78 C
ATOM 8 O4' A B 844 105.229 145.878 78.528 1.00 32.73 O
ATOM 9 C3' A B 844 103.708 147.708 78.453 1.00 35.21 C
ATOM 10 O3' A B 844 102.665 147.803 77.501 1.00 37.91 O
ATOM 11 C2' A B 844 103.396 146.763 79.613 1.00 35.04 C
ATOM 12 O2' A B 844 102.008 146.592 79.829 1.00 32.79 O
ATOM 13 C1' A B 844 104.051 145.461 79.158 1.00 33.06 C
ATOM 14 N9 A B 844 104.407 144.564 80.261 1.00 31.70 N
ATOM 15 C8 A B 844 104.735 144.900 81.552 1.00 31.20 C
ATOM 16 N7 A B 844 104.915 143.868 82.338 1.00 30.67 N
ATOM 17 C5 A B 844 104.711 142.778 81.507 1.00 30.91 C
ATOM 18 C6 A B 844 104.734 141.402 81.744 1.00 31.01 C
ATOM 19 N6 A B 844 104.968 140.867 82.943 1.00 34.27 N
ATOM 20 N1 A B 844 104.499 140.579 80.703 1.00 29.79 N
ATOM 21 C2 A B 844 104.257 141.115 79.509 1.00 30.42 C
ATOM 22 N3 A B 844 104.195 142.394 79.159 1.00 32.00 N
ATOM 23 C4 A B 844 104.429 143.188 80.220 1.00 31.44 C
ATOM 24 P U B 845 102.256 149.254 76.932 1.00 41.44 P
ATOM 25 OP1 U B 845 101.755 149.073 75.545 1.00 42.06 O
ATOM 26 OP2 U B 845 103.372 150.196 77.187 1.00 40.88 O
ATOM 27 O5' U B 845 101.025 149.719 77.821 1.00 36.89 O
TER

Atoms:
OP1: (112.181,150.156,87.334)
OP2: (113.296,150.714,85.103)
C3': (107.160,150.174,85.891)
C1': (107.597,149.123,83.792)
C5': (109.591,150.956,86.139)
O6: (109.383,143.442,84.353)
O4': (108.747,149.831,84.191)
C8: (108.083,147.032,82.451)
C2: (108.707,146.059,86.651)
C6: (109.048,144.562,84.749)
C5: (108.630,145.667,83.985)
C4: (108.294,146.835,84.632)
P: (112.244,150.989,86.107)
C4': (108.398,150.767,85.228)
C2': (106.440,149.486,84.730)
O2': (105.568,150.351,84.037)
N1: (109.059,144.854,86.107)
N2: (108.795,146.154,87.970)
N3: (108.304,147.097,85.949)
N7: (108.491,145.803,82.611)
N9: (107.961,147.719,83.638)
O5': (110.823,150.977,85.375)
O3': (106.320,151.211,86.409)
OP1: (108.706,149.104,79.769)
OP2: (107.326,150.650,78.263)
C3': (103.708,147.708,78.453)
C1': (104.051,145.461,79.158)
C5': (106.193,147.989,77.871)
O4': (105.229,145.878,78.528)
C8: (104.735,144.900,81.552)
O2': (102.008,146.592,79.829)
C6: (104.734,141.402,81.744)
C5: (104.711,142.778,81.507)
C4: (104.429,143.188,80.220)
P: (107.407,149.727,79.416)
C4': (104.966,147.117,77.826)
C2': (103.396,146.763,79.613)
C2: (104.257,141.115,79.509)
N1: (104.499,140.579,80.703)
N3: (104.195,142.394,79.159)
N6: (104.968,140.867,82.943)
N7: (104.915,143.868,82.338)
N9: (104.407,144.564,80.261)
O5': (106.366,148.551,79.178)
O3': (102.665,147.803,77.501)
Image (generated by PyMOL):
PyMOL image
show in jmol