Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21329:21499
Extra
PDB:
ATOM 1 O3' A A1328 -109.362 -73.316 43.384 1.00121.98 O
ATOM 2 P U A1329 -108.651 -71.896 43.091 1.00101.33 P
ATOM 3 OP1 U A1329 -109.587 -70.818 43.514 1.00101.71 O
ATOM 4 OP2 U A1329 -108.199 -71.936 41.674 1.00101.03 O
ATOM 5 O5' U A1329 -107.385 -71.923 44.072 1.00100.54 O
ATOM 6 C5' U A1329 -106.294 -72.816 43.838 1.00100.06 C
ATOM 7 C4' U A1329 -104.989 -72.314 44.438 1.00 99.14 C
ATOM 8 O4' U A1329 -104.510 -71.167 43.687 1.00 98.54 O
ATOM 9 C3' U A1329 -105.058 -71.870 45.897 1.00 99.13 C
ATOM 10 O3' U A1329 -103.878 -72.285 46.575 1.00 98.55 O
ATOM 11 C2' U A1329 -105.080 -70.350 45.800 1.00 98.76 C
ATOM 12 O2' U A1329 -104.581 -69.693 46.937 1.00 98.33 O
ATOM 13 C1' U A1329 -104.200 -70.117 44.583 1.00 98.11 C
ATOM 14 N1 U A1329 -104.430 -68.824 43.896 1.00 97.93 N
ATOM 15 C2 U A1329 -103.447 -67.858 43.961 1.00 97.11 C
ATOM 16 O2 U A1329 -102.414 -68.036 44.571 1.00 96.54 O
ATOM 17 N3 U A1329 -103.707 -66.686 43.292 1.00 97.01 N
ATOM 18 C4 U A1329 -104.845 -66.376 42.582 1.00 97.65 C
ATOM 19 O4 U A1329 -104.985 -65.286 42.026 1.00 97.52 O
ATOM 20 C5 U A1329 -105.799 -67.428 42.555 1.00 98.47 C
ATOM 21 C6 U A1329 -105.569 -68.578 43.194 1.00 98.58 C
ATOM 22 P A A1330 -103.883 -73.659 47.402 1.00 99.64 P
ATOM 23 OP1 A A1330 -102.525 -74.244 47.294 1.00 98.99 O
ATOM 24 OP2 A A1330 -105.044 -74.452 46.918 1.00100.53 O
ATOM 25 O5' A A1330 -104.156 -73.174 48.894 1.00 99.78 O
TER
ATOM 1 O3' A B1498 -98.721 -69.486 46.949 1.00 83.09 O
ATOM 2 P U B1499 -97.981 -70.547 45.991 1.00 91.75 P
ATOM 3 OP1 U B1499 -97.469 -71.630 46.865 1.00 91.81 O
ATOM 4 OP2 U B1499 -97.030 -69.789 45.152 1.00 91.01 O
ATOM 5 O5' U B1499 -99.146 -71.118 45.080 1.00 92.51 O
ATOM 6 C5' U B1499 -99.822 -72.317 45.435 1.00 93.22 C
ATOM 7 C4' U B1499 -100.367 -73.034 44.231 1.00 93.68 C
ATOM 8 O4' U B1499 -101.397 -72.227 43.601 1.00 94.04 O
ATOM 9 C3' U B1499 -99.348 -73.373 43.139 1.00 93.16 C
ATOM 10 O3' U B1499 -99.510 -74.732 42.750 1.00 93.60 O
ATOM 11 C2' U B1499 -99.740 -72.443 41.980 1.00 93.11 C
ATOM 12 O2' U B1499 -99.452 -72.946 40.698 1.00 93.06 O
ATOM 13 C1' U B1499 -101.236 -72.281 42.204 1.00 93.93 C
ATOM 14 N1 U B1499 -101.803 -71.061 41.647 1.00 93.95 N
ATOM 15 C2 U B1499 -102.924 -71.165 40.889 1.00 94.64 C
ATOM 16 O2 U B1499 -103.407 -72.253 40.659 1.00 95.19 O
ATOM 17 N3 U B1499 -103.446 -69.980 40.418 1.00 94.68 N
ATOM 18 C4 U B1499 -102.935 -68.718 40.644 1.00 94.09 C
ATOM 19 O4 U B1499 -103.443 -67.699 40.175 1.00 94.19 O
ATOM 20 C5 U B1499 -101.778 -68.720 41.452 1.00 93.39 C
ATOM 21 C6 U B1499 -101.276 -69.858 41.922 1.00 93.36 C
ATOM 22 P C B1500 -98.730 -75.894 43.550 1.00 94.74 P
ATOM 23 OP1 C B1500 -99.549 -77.126 43.432 1.00 95.54 O
ATOM 24 OP2 C B1500 -98.421 -75.373 44.913 1.00 94.49 O
ATOM 25 O5' C B1500 -97.381 -76.051 42.704 1.00 94.02 O
TER
ATOM 2 P U A1329 -108.651 -71.896 43.091 1.00101.33 P
ATOM 3 OP1 U A1329 -109.587 -70.818 43.514 1.00101.71 O
ATOM 4 OP2 U A1329 -108.199 -71.936 41.674 1.00101.03 O
ATOM 5 O5' U A1329 -107.385 -71.923 44.072 1.00100.54 O
ATOM 6 C5' U A1329 -106.294 -72.816 43.838 1.00100.06 C
ATOM 7 C4' U A1329 -104.989 -72.314 44.438 1.00 99.14 C
ATOM 8 O4' U A1329 -104.510 -71.167 43.687 1.00 98.54 O
ATOM 9 C3' U A1329 -105.058 -71.870 45.897 1.00 99.13 C
ATOM 10 O3' U A1329 -103.878 -72.285 46.575 1.00 98.55 O
ATOM 11 C2' U A1329 -105.080 -70.350 45.800 1.00 98.76 C
ATOM 12 O2' U A1329 -104.581 -69.693 46.937 1.00 98.33 O
ATOM 13 C1' U A1329 -104.200 -70.117 44.583 1.00 98.11 C
ATOM 14 N1 U A1329 -104.430 -68.824 43.896 1.00 97.93 N
ATOM 15 C2 U A1329 -103.447 -67.858 43.961 1.00 97.11 C
ATOM 16 O2 U A1329 -102.414 -68.036 44.571 1.00 96.54 O
ATOM 17 N3 U A1329 -103.707 -66.686 43.292 1.00 97.01 N
ATOM 18 C4 U A1329 -104.845 -66.376 42.582 1.00 97.65 C
ATOM 19 O4 U A1329 -104.985 -65.286 42.026 1.00 97.52 O
ATOM 20 C5 U A1329 -105.799 -67.428 42.555 1.00 98.47 C
ATOM 21 C6 U A1329 -105.569 -68.578 43.194 1.00 98.58 C
ATOM 22 P A A1330 -103.883 -73.659 47.402 1.00 99.64 P
ATOM 23 OP1 A A1330 -102.525 -74.244 47.294 1.00 98.99 O
ATOM 24 OP2 A A1330 -105.044 -74.452 46.918 1.00100.53 O
ATOM 25 O5' A A1330 -104.156 -73.174 48.894 1.00 99.78 O
TER
ATOM 1 O3' A B1498 -98.721 -69.486 46.949 1.00 83.09 O
ATOM 2 P U B1499 -97.981 -70.547 45.991 1.00 91.75 P
ATOM 3 OP1 U B1499 -97.469 -71.630 46.865 1.00 91.81 O
ATOM 4 OP2 U B1499 -97.030 -69.789 45.152 1.00 91.01 O
ATOM 5 O5' U B1499 -99.146 -71.118 45.080 1.00 92.51 O
ATOM 6 C5' U B1499 -99.822 -72.317 45.435 1.00 93.22 C
ATOM 7 C4' U B1499 -100.367 -73.034 44.231 1.00 93.68 C
ATOM 8 O4' U B1499 -101.397 -72.227 43.601 1.00 94.04 O
ATOM 9 C3' U B1499 -99.348 -73.373 43.139 1.00 93.16 C
ATOM 10 O3' U B1499 -99.510 -74.732 42.750 1.00 93.60 O
ATOM 11 C2' U B1499 -99.740 -72.443 41.980 1.00 93.11 C
ATOM 12 O2' U B1499 -99.452 -72.946 40.698 1.00 93.06 O
ATOM 13 C1' U B1499 -101.236 -72.281 42.204 1.00 93.93 C
ATOM 14 N1 U B1499 -101.803 -71.061 41.647 1.00 93.95 N
ATOM 15 C2 U B1499 -102.924 -71.165 40.889 1.00 94.64 C
ATOM 16 O2 U B1499 -103.407 -72.253 40.659 1.00 95.19 O
ATOM 17 N3 U B1499 -103.446 -69.980 40.418 1.00 94.68 N
ATOM 18 C4 U B1499 -102.935 -68.718 40.644 1.00 94.09 C
ATOM 19 O4 U B1499 -103.443 -67.699 40.175 1.00 94.19 O
ATOM 20 C5 U B1499 -101.778 -68.720 41.452 1.00 93.39 C
ATOM 21 C6 U B1499 -101.276 -69.858 41.922 1.00 93.36 C
ATOM 22 P C B1500 -98.730 -75.894 43.550 1.00 94.74 P
ATOM 23 OP1 C B1500 -99.549 -77.126 43.432 1.00 95.54 O
ATOM 24 OP2 C B1500 -98.421 -75.373 44.913 1.00 94.49 O
ATOM 25 O5' C B1500 -97.381 -76.051 42.704 1.00 94.02 O
TER
Atoms:
C4: (-104.845,-66.376,42.582)
N3: (-103.707,-66.686,43.292)
OP1: (-109.587,-70.818,43.514)
OP2: (-108.199,-71.936,41.674)
C2: (-103.447,-67.858,43.961)
C1': (-104.200,-70.117,44.583)
C3': (-105.058,-71.870,45.897)
O5': (-107.385,-71.923,44.072)
O4': (-104.510,-71.167,43.687)
C5': (-106.294,-72.816,43.838)
P: (-108.651,-71.896,43.091)
C4': (-104.989,-72.314,44.438)
C2': (-105.080,-70.350,45.800)
O2': (-104.581,-69.693,46.937)
N1: (-104.430,-68.824,43.896)
O4: (-104.985,-65.286,42.026)
O2: (-102.414,-68.036,44.571)
C6: (-105.569,-68.578,43.194)
C5: (-105.799,-67.428,42.555)
O3': (-103.878,-72.285,46.575)
N3: (-103.707,-66.686,43.292)
OP1: (-109.587,-70.818,43.514)
OP2: (-108.199,-71.936,41.674)
C2: (-103.447,-67.858,43.961)
C1': (-104.200,-70.117,44.583)
C3': (-105.058,-71.870,45.897)
O5': (-107.385,-71.923,44.072)
O4': (-104.510,-71.167,43.687)
C5': (-106.294,-72.816,43.838)
P: (-108.651,-71.896,43.091)
C4': (-104.989,-72.314,44.438)
C2': (-105.080,-70.350,45.800)
O2': (-104.581,-69.693,46.937)
N1: (-104.430,-68.824,43.896)
O4: (-104.985,-65.286,42.026)
O2: (-102.414,-68.036,44.571)
C6: (-105.569,-68.578,43.194)
C5: (-105.799,-67.428,42.555)
O3': (-103.878,-72.285,46.575)
C4: (-102.935,-68.718,40.644)
N3: (-103.446,-69.980,40.418)
OP1: (-97.469,-71.630,46.865)
OP2: (-97.030,-69.789,45.152)
C2: (-102.924,-71.165,40.889)
C1': (-101.236,-72.281,42.204)
C3': (-99.348,-73.373,43.139)
O5': (-99.146,-71.118,45.080)
O4': (-101.397,-72.227,43.601)
C5': (-99.822,-72.317,45.435)
P: (-97.981,-70.547,45.991)
C4': (-100.367,-73.034,44.231)
C2': (-99.740,-72.443,41.980)
O2': (-99.452,-72.946,40.698)
N1: (-101.803,-71.061,41.647)
O4: (-103.443,-67.699,40.175)
O2: (-103.407,-72.253,40.659)
C6: (-101.276,-69.858,41.922)
C5: (-101.778,-68.720,41.452)
O3': (-99.510,-74.732,42.750)
N3: (-103.446,-69.980,40.418)
OP1: (-97.469,-71.630,46.865)
OP2: (-97.030,-69.789,45.152)
C2: (-102.924,-71.165,40.889)
C1': (-101.236,-72.281,42.204)
C3': (-99.348,-73.373,43.139)
O5': (-99.146,-71.118,45.080)
O4': (-101.397,-72.227,43.601)
C5': (-99.822,-72.317,45.435)
P: (-97.981,-70.547,45.991)
C4': (-100.367,-73.034,44.231)
C2': (-99.740,-72.443,41.980)
O2': (-99.452,-72.946,40.698)
N1: (-101.803,-71.061,41.647)
O4: (-103.443,-67.699,40.175)
O2: (-103.407,-72.253,40.659)
C6: (-101.276,-69.858,41.922)
C5: (-101.778,-68.720,41.452)
O3': (-99.510,-74.732,42.750)
Image (generated by PyMOL):