ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZX7:C8:C7

Extra

PDB:
ATOM 1 O3' A A 7 40.582 11.795 25.275 1.00 22.98 O
ATOM 2 P G A 8 41.287 10.453 24.747 1.00 23.03 P
ATOM 3 OP1 G A 8 41.242 9.402 25.795 1.00 19.13 O
ATOM 4 OP2 G A 8 42.604 10.918 24.231 1.00 23.98 O
ATOM 5 O5' G A 8 40.387 10.010 23.510 1.00 23.33 O
ATOM 6 C5' G A 8 40.293 10.840 22.356 1.00 22.66 C
ATOM 7 C4' G A 8 41.075 10.237 21.211 1.00 21.59 C
ATOM 8 O4' G A 8 40.431 8.998 20.800 1.00 22.04 O
ATOM 9 C3' G A 8 41.098 11.079 19.945 1.00 21.37 C
ATOM 10 O3' G A 8 42.156 12.019 19.967 1.00 19.54 O
ATOM 11 C2' G A 8 41.329 10.030 18.875 1.00 22.06 C
ATOM 12 O2' G A 8 42.681 9.607 18.821 1.00 21.99 O
ATOM 13 C1' G A 8 40.440 8.900 19.391 1.00 23.57 C
ATOM 14 N9 G A 8 39.064 9.021 18.915 1.00 26.99 N
ATOM 15 C8 G A 8 37.934 9.308 19.649 1.00 25.07 C
ATOM 16 N7 G A 8 36.849 9.361 18.920 1.00 25.80 N
ATOM 17 C5 G A 8 37.287 9.084 17.630 1.00 26.30 C
ATOM 18 C6 G A 8 36.568 8.998 16.400 1.00 26.04 C
ATOM 19 O6 G A 8 35.352 9.151 16.194 1.00 27.54 O
ATOM 20 N1 G A 8 37.412 8.705 15.339 1.00 24.92 N
ATOM 21 C2 G A 8 38.768 8.513 15.435 1.00 28.07 C
ATOM 22 N2 G A 8 39.412 8.241 14.291 1.00 29.19 N
ATOM 23 N3 G A 8 39.446 8.583 16.566 1.00 25.84 N
ATOM 24 C4 G A 8 38.652 8.871 17.613 1.00 26.70 C
ATOM 25 P U A 9 42.031 13.366 19.107 1.00 23.57 P
ATOM 26 OP1 U A 9 43.395 13.988 19.109 1.00 21.04 O
ATOM 27 OP2 U A 9 40.865 14.153 19.569 1.00 19.90 O
ATOM 28 O5' U A 9 41.688 12.870 17.632 1.00 22.67 O
TER

ATOM 1 O3' A B 6 34.601 11.532 23.515 1.00 36.04 O
ATOM 2 P A B 7 35.953 10.656 23.494 1.00 36.02 P
ATOM 3 OP1 A B 7 36.602 10.853 22.177 1.00 35.83 O
ATOM 4 OP2 A B 7 35.604 9.285 23.952 1.00 37.42 O
ATOM 5 O5' A B 7 36.879 11.336 24.594 1.00 34.26 O
ATOM 6 C5' A B 7 37.602 12.529 24.321 1.00 27.79 C
ATOM 7 C4' A B 7 38.466 12.870 25.505 1.00 26.46 C
ATOM 8 O4' A B 7 37.614 13.161 26.637 1.00 25.82 O
ATOM 9 C3' A B 7 39.355 11.732 25.985 1.00 23.94 C
ATOM 10 O3' A B 7 40.582 11.795 25.275 1.00 22.98 O
ATOM 11 C2' A B 7 39.574 12.067 27.461 1.00 24.33 C
ATOM 12 O2' A B 7 40.680 12.927 27.684 1.00 20.75 O
ATOM 13 C1' A B 7 38.263 12.775 27.830 1.00 23.51 C
ATOM 14 N9 A B 7 37.328 11.974 28.615 1.00 24.69 N
ATOM 15 C8 A B 7 36.410 11.054 28.166 1.00 23.82 C
ATOM 16 N7 A B 7 35.715 10.495 29.125 1.00 24.28 N
ATOM 17 C5 A B 7 36.205 11.088 30.281 1.00 24.32 C
ATOM 18 C6 A B 7 35.881 10.924 31.636 1.00 24.05 C
ATOM 19 N6 A B 7 34.944 10.090 32.074 1.00 22.16 N
ATOM 20 N1 A B 7 36.562 11.663 32.538 1.00 25.91 N
ATOM 21 C2 A B 7 37.495 12.516 32.097 1.00 25.12 C
ATOM 22 N3 A B 7 37.886 12.763 30.850 1.00 25.52 N
ATOM 23 C4 A B 7 37.196 12.003 29.981 1.00 23.69 C
ATOM 24 P G B 8 41.287 10.453 24.747 1.00 23.03 P
ATOM 25 OP1 G B 8 41.242 9.402 25.795 1.00 19.13 O
ATOM 26 OP2 G B 8 42.604 10.918 24.231 1.00 23.98 O
ATOM 27 O5' G B 8 40.387 10.010 23.510 1.00 23.33 O
TER

Atoms:
OP1: (41.242,9.402,25.795)
OP2: (42.604,10.918,24.231)
C3': (41.098,11.079,19.945)
C1': (40.440,8.900,19.391)
C5': (40.293,10.840,22.356)
O6: (35.352,9.151,16.194)
O4': (40.431,8.998,20.800)
C8: (37.934,9.308,19.649)
C2: (38.768,8.513,15.435)
C6: (36.568,8.998,16.400)
C5: (37.287,9.084,17.630)
C4: (38.652,8.871,17.613)
P: (41.287,10.453,24.747)
C4': (41.075,10.237,21.211)
C2': (41.329,10.030,18.875)
O2': (42.681,9.607,18.821)
N1: (37.412,8.705,15.339)
N2: (39.412,8.241,14.291)
N3: (39.446,8.583,16.566)
N7: (36.849,9.361,18.920)
N9: (39.064,9.021,18.915)
O5': (40.387,10.010,23.510)
O3': (42.156,12.019,19.967)
OP1: (36.602,10.853,22.177)
OP2: (35.604,9.285,23.952)
C3': (39.355,11.732,25.985)
C1': (38.263,12.775,27.830)
C5': (37.602,12.529,24.321)
O4': (37.614,13.161,26.637)
C8: (36.410,11.054,28.166)
O2': (40.680,12.927,27.684)
C6: (35.881,10.924,31.636)
C5: (36.205,11.088,30.281)
C4: (37.196,12.003,29.981)
P: (35.953,10.656,23.494)
C4': (38.466,12.870,25.505)
C2': (39.574,12.067,27.461)
C2: (37.495,12.516,32.097)
N1: (36.562,11.663,32.538)
N3: (37.886,12.763,30.850)
N6: (34.944,10.090,32.074)
N7: (35.715,10.495,29.125)
N9: (37.328,11.974,28.615)
O5': (36.879,11.336,24.594)
O3': (40.582,11.795,25.275)
Image (generated by PyMOL):
PyMOL image
show in jmol