Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12989:13003
Extra
PDB:
ATOM 1 O3' U A2988 79.008 66.585 9.091 1.00103.19 O
ATOM 2 P U A2989 77.402 66.646 8.985 1.00 99.28 P
ATOM 3 OP1 U A2989 77.016 68.069 9.208 1.00 99.81 O
ATOM 4 OP2 U A2989 76.851 65.583 9.901 1.00 98.49 O
ATOM 5 O5' U A2989 77.125 66.259 7.468 1.00 99.55 O
ATOM 6 C5' U A2989 77.166 67.253 6.472 1.00100.31 C
ATOM 7 C4' U A2989 76.531 66.778 5.206 1.00100.46 C
ATOM 8 O4' U A2989 77.184 65.560 4.765 1.00100.13 O
ATOM 9 C3' U A2989 75.077 66.359 5.299 1.00100.13 C
ATOM 10 O3' U A2989 74.150 67.432 5.408 1.00100.50 O
ATOM 11 C2' U A2989 74.926 65.509 4.046 1.00100.17 C
ATOM 12 O2' U A2989 74.911 66.314 2.868 1.00100.92 O
ATOM 13 C1' U A2989 76.242 64.738 4.096 1.00 99.92 C
ATOM 14 N1 U A2989 76.106 63.463 4.850 1.00 99.12 N
ATOM 15 C2 U A2989 75.526 62.414 4.155 1.00 98.87 C
ATOM 16 O2 U A2989 75.131 62.502 2.994 1.00 99.27 O
ATOM 17 N3 U A2989 75.430 61.247 4.870 1.00 98.14 N
ATOM 18 C4 U A2989 75.828 61.011 6.167 1.00 97.65 C
ATOM 19 O4 U A2989 75.652 59.876 6.623 1.00 97.03 O
ATOM 20 C5 U A2989 76.410 62.148 6.824 1.00 97.95 C
ATOM 21 C6 U A2989 76.522 63.310 6.159 1.00 98.66 C
ATOM 22 P G A2990 72.910 67.305 6.444 1.00 82.85 P
ATOM 23 OP1 G A2990 72.919 68.537 7.287 1.00 83.14 O
ATOM 24 OP2 G A2990 73.026 65.981 7.128 1.00 82.05 O
ATOM 25 O5' G A2990 71.641 67.297 5.465 1.00 83.09 O
TER
ATOM 1 O3' U B3002 74.849 56.801 -1.669 1.00 85.98 O
ATOM 2 P U B3003 76.427 57.015 -1.905 1.00 88.23 P
ATOM 3 OP1 U B3003 76.645 56.977 -3.362 1.00 88.79 O
ATOM 4 OP2 U B3003 77.149 56.039 -1.047 1.00 87.60 O
ATOM 5 O5' U B3003 76.669 58.480 -1.351 1.00 88.60 O
ATOM 6 C5' U B3003 76.052 59.597 -1.955 1.00 89.21 C
ATOM 7 C4' U B3003 76.655 60.863 -1.435 1.00 89.57 C
ATOM 8 O4' U B3003 76.278 61.043 -0.053 1.00 89.10 O
ATOM 9 C3' U B3003 78.176 60.893 -1.391 1.00 89.69 C
ATOM 10 O3' U B3003 78.764 61.186 -2.644 1.00 90.33 O
ATOM 11 C2' U B3003 78.466 61.941 -0.333 1.00 89.75 C
ATOM 12 O2' U B3003 78.383 63.243 -0.890 1.00 90.48 O
ATOM 13 C1' U B3003 77.293 61.749 0.623 1.00 89.22 C
ATOM 14 N1 U B3003 77.670 61.002 1.809 1.00 88.53 N
ATOM 15 C2 U B3003 78.368 61.767 2.711 1.00 88.59 C
ATOM 16 O2 U B3003 78.656 62.942 2.501 1.00 89.17 O
ATOM 17 N3 U B3003 78.716 61.098 3.849 1.00 87.96 N
ATOM 18 C4 U B3003 78.442 59.789 4.160 1.00 87.31 C
ATOM 19 O4 U B3003 78.844 59.370 5.247 1.00 86.81 O
ATOM 20 C5 U B3003 77.706 59.057 3.162 1.00 87.29 C
ATOM 21 C6 U B3003 77.345 59.677 2.024 1.00 87.90 C
ATOM 22 P G B3004 80.239 60.640 -2.978 1.00 92.98 P
ATOM 23 OP1 G B3004 80.498 60.959 -4.414 1.00 93.68 O
ATOM 24 OP2 G B3004 80.299 59.204 -2.528 1.00 92.25 O
ATOM 25 O5' G B3004 81.173 61.533 -2.037 1.00 93.07 O
TER
ATOM 2 P U A2989 77.402 66.646 8.985 1.00 99.28 P
ATOM 3 OP1 U A2989 77.016 68.069 9.208 1.00 99.81 O
ATOM 4 OP2 U A2989 76.851 65.583 9.901 1.00 98.49 O
ATOM 5 O5' U A2989 77.125 66.259 7.468 1.00 99.55 O
ATOM 6 C5' U A2989 77.166 67.253 6.472 1.00100.31 C
ATOM 7 C4' U A2989 76.531 66.778 5.206 1.00100.46 C
ATOM 8 O4' U A2989 77.184 65.560 4.765 1.00100.13 O
ATOM 9 C3' U A2989 75.077 66.359 5.299 1.00100.13 C
ATOM 10 O3' U A2989 74.150 67.432 5.408 1.00100.50 O
ATOM 11 C2' U A2989 74.926 65.509 4.046 1.00100.17 C
ATOM 12 O2' U A2989 74.911 66.314 2.868 1.00100.92 O
ATOM 13 C1' U A2989 76.242 64.738 4.096 1.00 99.92 C
ATOM 14 N1 U A2989 76.106 63.463 4.850 1.00 99.12 N
ATOM 15 C2 U A2989 75.526 62.414 4.155 1.00 98.87 C
ATOM 16 O2 U A2989 75.131 62.502 2.994 1.00 99.27 O
ATOM 17 N3 U A2989 75.430 61.247 4.870 1.00 98.14 N
ATOM 18 C4 U A2989 75.828 61.011 6.167 1.00 97.65 C
ATOM 19 O4 U A2989 75.652 59.876 6.623 1.00 97.03 O
ATOM 20 C5 U A2989 76.410 62.148 6.824 1.00 97.95 C
ATOM 21 C6 U A2989 76.522 63.310 6.159 1.00 98.66 C
ATOM 22 P G A2990 72.910 67.305 6.444 1.00 82.85 P
ATOM 23 OP1 G A2990 72.919 68.537 7.287 1.00 83.14 O
ATOM 24 OP2 G A2990 73.026 65.981 7.128 1.00 82.05 O
ATOM 25 O5' G A2990 71.641 67.297 5.465 1.00 83.09 O
TER
ATOM 1 O3' U B3002 74.849 56.801 -1.669 1.00 85.98 O
ATOM 2 P U B3003 76.427 57.015 -1.905 1.00 88.23 P
ATOM 3 OP1 U B3003 76.645 56.977 -3.362 1.00 88.79 O
ATOM 4 OP2 U B3003 77.149 56.039 -1.047 1.00 87.60 O
ATOM 5 O5' U B3003 76.669 58.480 -1.351 1.00 88.60 O
ATOM 6 C5' U B3003 76.052 59.597 -1.955 1.00 89.21 C
ATOM 7 C4' U B3003 76.655 60.863 -1.435 1.00 89.57 C
ATOM 8 O4' U B3003 76.278 61.043 -0.053 1.00 89.10 O
ATOM 9 C3' U B3003 78.176 60.893 -1.391 1.00 89.69 C
ATOM 10 O3' U B3003 78.764 61.186 -2.644 1.00 90.33 O
ATOM 11 C2' U B3003 78.466 61.941 -0.333 1.00 89.75 C
ATOM 12 O2' U B3003 78.383 63.243 -0.890 1.00 90.48 O
ATOM 13 C1' U B3003 77.293 61.749 0.623 1.00 89.22 C
ATOM 14 N1 U B3003 77.670 61.002 1.809 1.00 88.53 N
ATOM 15 C2 U B3003 78.368 61.767 2.711 1.00 88.59 C
ATOM 16 O2 U B3003 78.656 62.942 2.501 1.00 89.17 O
ATOM 17 N3 U B3003 78.716 61.098 3.849 1.00 87.96 N
ATOM 18 C4 U B3003 78.442 59.789 4.160 1.00 87.31 C
ATOM 19 O4 U B3003 78.844 59.370 5.247 1.00 86.81 O
ATOM 20 C5 U B3003 77.706 59.057 3.162 1.00 87.29 C
ATOM 21 C6 U B3003 77.345 59.677 2.024 1.00 87.90 C
ATOM 22 P G B3004 80.239 60.640 -2.978 1.00 92.98 P
ATOM 23 OP1 G B3004 80.498 60.959 -4.414 1.00 93.68 O
ATOM 24 OP2 G B3004 80.299 59.204 -2.528 1.00 92.25 O
ATOM 25 O5' G B3004 81.173 61.533 -2.037 1.00 93.07 O
TER
Atoms:
C4: (75.828,61.011,6.167)
N3: (75.430,61.247,4.870)
OP1: (77.016,68.069,9.208)
OP2: (76.851,65.583,9.901)
C2: (75.526,62.414,4.155)
C1': (76.242,64.738,4.096)
C3': (75.077,66.359,5.299)
O5': (77.125,66.259,7.468)
O4': (77.184,65.560,4.765)
C5': (77.166,67.253,6.472)
P: (77.402,66.646,8.985)
C4': (76.531,66.778,5.206)
C2': (74.926,65.509,4.046)
O2': (74.911,66.314,2.868)
N1: (76.106,63.463,4.850)
O4: (75.652,59.876,6.623)
O2: (75.131,62.502,2.994)
C6: (76.522,63.310,6.159)
C5: (76.410,62.148,6.824)
O3': (74.150,67.432,5.408)
N3: (75.430,61.247,4.870)
OP1: (77.016,68.069,9.208)
OP2: (76.851,65.583,9.901)
C2: (75.526,62.414,4.155)
C1': (76.242,64.738,4.096)
C3': (75.077,66.359,5.299)
O5': (77.125,66.259,7.468)
O4': (77.184,65.560,4.765)
C5': (77.166,67.253,6.472)
P: (77.402,66.646,8.985)
C4': (76.531,66.778,5.206)
C2': (74.926,65.509,4.046)
O2': (74.911,66.314,2.868)
N1: (76.106,63.463,4.850)
O4: (75.652,59.876,6.623)
O2: (75.131,62.502,2.994)
C6: (76.522,63.310,6.159)
C5: (76.410,62.148,6.824)
O3': (74.150,67.432,5.408)
C4: (78.442,59.789,4.160)
N3: (78.716,61.098,3.849)
OP1: (76.645,56.977,-3.362)
OP2: (77.149,56.039,-1.047)
C2: (78.368,61.767,2.711)
C1': (77.293,61.749,0.623)
C3': (78.176,60.893,-1.391)
O5': (76.669,58.480,-1.351)
O4': (76.278,61.043,-0.053)
C5': (76.052,59.597,-1.955)
P: (76.427,57.015,-1.905)
C4': (76.655,60.863,-1.435)
C2': (78.466,61.941,-0.333)
O2': (78.383,63.243,-0.890)
N1: (77.670,61.002,1.809)
O4: (78.844,59.370,5.247)
O2: (78.656,62.942,2.501)
C6: (77.345,59.677,2.024)
C5: (77.706,59.057,3.162)
O3': (78.764,61.186,-2.644)
N3: (78.716,61.098,3.849)
OP1: (76.645,56.977,-3.362)
OP2: (77.149,56.039,-1.047)
C2: (78.368,61.767,2.711)
C1': (77.293,61.749,0.623)
C3': (78.176,60.893,-1.391)
O5': (76.669,58.480,-1.351)
O4': (76.278,61.043,-0.053)
C5': (76.052,59.597,-1.955)
P: (76.427,57.015,-1.905)
C4': (76.655,60.863,-1.435)
C2': (78.466,61.941,-0.333)
O2': (78.383,63.243,-0.890)
N1: (77.670,61.002,1.809)
O4: (78.844,59.370,5.247)
O2: (78.656,62.942,2.501)
C6: (77.345,59.677,2.024)
C5: (77.706,59.057,3.162)
O3': (78.764,61.186,-2.644)
Image (generated by PyMOL):