Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2127:A2374
Extra
PDB:
ATOM 1 O3' U A2126 -106.375 -51.071 19.013 1.00 20.28 O
ATOM 2 P G A2127 -107.652 -51.655 18.238 1.00 10.89 P
ATOM 3 OP1 G A2127 -108.105 -50.584 17.319 1.00 30.88 O
ATOM 4 OP2 G A2127 -108.604 -52.256 19.203 1.00 30.88 O
ATOM 5 O5' G A2127 -107.077 -52.836 17.353 1.00 18.10 O
ATOM 6 C5' G A2127 -106.432 -52.547 16.113 1.00 18.10 C
ATOM 7 C4' G A2127 -105.478 -53.647 15.774 1.00 18.10 C
ATOM 8 O4' G A2127 -106.237 -54.866 15.599 1.00 18.10 O
ATOM 9 C3' G A2127 -104.660 -53.435 14.517 1.00 18.10 C
ATOM 10 O3' G A2127 -103.333 -53.833 14.805 1.00 18.10 O
ATOM 11 C2' G A2127 -105.368 -54.296 13.462 1.00 18.10 C
ATOM 12 O2' G A2127 -104.461 -54.840 12.504 1.00 18.10 O
ATOM 13 C1' G A2127 -106.022 -55.400 14.304 1.00 18.10 C
ATOM 14 N9 G A2127 -107.319 -55.864 13.798 1.00 16.80 N
ATOM 15 C8 G A2127 -107.548 -56.784 12.805 1.00 16.80 C
ATOM 16 N7 G A2127 -108.820 -56.974 12.563 1.00 16.80 N
ATOM 17 C5 G A2127 -109.467 -56.132 13.449 1.00 16.80 C
ATOM 18 C6 G A2127 -110.854 -55.891 13.649 1.00 16.80 C
ATOM 19 O6 G A2127 -111.831 -56.388 13.065 1.00 16.80 O
ATOM 20 N1 G A2127 -111.064 -54.960 14.652 1.00 16.80 N
ATOM 21 C2 G A2127 -110.077 -54.347 15.376 1.00 16.80 C
ATOM 22 N2 G A2127 -110.484 -53.480 16.305 1.00 16.80 N
ATOM 23 N3 G A2127 -108.791 -54.564 15.205 1.00 16.80 N
ATOM 24 C4 G A2127 -108.558 -55.453 14.229 1.00 16.80 C
ATOM 25 P G A2128 -102.116 -53.176 13.996 1.00 37.60 P
ATOM 26 OP1 G A2128 -102.501 -51.801 13.591 1.00 31.74 O
ATOM 27 OP2 G A2128 -101.713 -54.176 12.946 1.00 31.74 O
ATOM 28 O5' G A2128 -100.960 -52.998 15.080 1.00 0.79 O
TER
ATOM 1 O3' C B2373 -105.474 -59.323 11.116 1.00 16.77 O
ATOM 2 P A B2374 -104.501 -59.212 12.403 1.00 3.77 P
ATOM 3 OP1 A B2374 -105.227 -59.791 13.557 1.00 8.89 O
ATOM 4 OP2 A B2374 -104.014 -57.814 12.491 1.00 8.89 O
ATOM 5 O5' A B2374 -103.255 -60.151 12.071 1.00 20.60 O
ATOM 6 C5' A B2374 -103.399 -61.590 11.942 1.00 20.60 C
ATOM 7 C4' A B2374 -102.077 -62.211 11.541 1.00 20.60 C
ATOM 8 O4' A B2374 -101.586 -61.442 10.421 1.00 20.60 O
ATOM 9 C3' A B2374 -100.994 -62.131 12.611 1.00 20.60 C
ATOM 10 O3' A B2374 -100.049 -63.188 12.422 1.00 20.60 O
ATOM 11 C2' A B2374 -100.317 -60.802 12.309 1.00 20.60 C
ATOM 12 O2' A B2374 -98.969 -60.745 12.696 1.00 20.60 O
ATOM 13 C1' A B2374 -100.422 -60.735 10.791 1.00 20.60 C
ATOM 14 N9 A B2374 -100.573 -59.366 10.319 1.00 6.32 N
ATOM 15 C8 A B2374 -101.458 -58.413 10.746 1.00 6.32 C
ATOM 16 N7 A B2374 -101.364 -57.284 10.100 1.00 6.32 N
ATOM 17 C5 A B2374 -100.347 -57.514 9.187 1.00 6.32 C
ATOM 18 C6 A B2374 -99.777 -56.711 8.194 1.00 6.32 C
ATOM 19 N6 A B2374 -100.188 -55.470 7.925 1.00 6.32 N
ATOM 20 N1 A B2374 -98.770 -57.233 7.465 1.00 6.32 N
ATOM 21 C2 A B2374 -98.390 -58.485 7.720 1.00 6.32 C
ATOM 22 N3 A B2374 -98.862 -59.342 8.619 1.00 6.32 N
ATOM 23 C4 A B2374 -99.847 -58.784 9.324 1.00 6.32 C
ATOM 24 P C B2375 -100.266 -64.612 13.144 1.00 9.37 P
ATOM 25 OP1 C B2375 -101.445 -64.554 14.073 1.00 12.65 O
ATOM 26 OP2 C B2375 -98.936 -65.100 13.638 1.00 12.65 O
ATOM 27 O5' C B2375 -100.715 -65.542 11.944 1.00 0.79 O
TER
ATOM 2 P G A2127 -107.652 -51.655 18.238 1.00 10.89 P
ATOM 3 OP1 G A2127 -108.105 -50.584 17.319 1.00 30.88 O
ATOM 4 OP2 G A2127 -108.604 -52.256 19.203 1.00 30.88 O
ATOM 5 O5' G A2127 -107.077 -52.836 17.353 1.00 18.10 O
ATOM 6 C5' G A2127 -106.432 -52.547 16.113 1.00 18.10 C
ATOM 7 C4' G A2127 -105.478 -53.647 15.774 1.00 18.10 C
ATOM 8 O4' G A2127 -106.237 -54.866 15.599 1.00 18.10 O
ATOM 9 C3' G A2127 -104.660 -53.435 14.517 1.00 18.10 C
ATOM 10 O3' G A2127 -103.333 -53.833 14.805 1.00 18.10 O
ATOM 11 C2' G A2127 -105.368 -54.296 13.462 1.00 18.10 C
ATOM 12 O2' G A2127 -104.461 -54.840 12.504 1.00 18.10 O
ATOM 13 C1' G A2127 -106.022 -55.400 14.304 1.00 18.10 C
ATOM 14 N9 G A2127 -107.319 -55.864 13.798 1.00 16.80 N
ATOM 15 C8 G A2127 -107.548 -56.784 12.805 1.00 16.80 C
ATOM 16 N7 G A2127 -108.820 -56.974 12.563 1.00 16.80 N
ATOM 17 C5 G A2127 -109.467 -56.132 13.449 1.00 16.80 C
ATOM 18 C6 G A2127 -110.854 -55.891 13.649 1.00 16.80 C
ATOM 19 O6 G A2127 -111.831 -56.388 13.065 1.00 16.80 O
ATOM 20 N1 G A2127 -111.064 -54.960 14.652 1.00 16.80 N
ATOM 21 C2 G A2127 -110.077 -54.347 15.376 1.00 16.80 C
ATOM 22 N2 G A2127 -110.484 -53.480 16.305 1.00 16.80 N
ATOM 23 N3 G A2127 -108.791 -54.564 15.205 1.00 16.80 N
ATOM 24 C4 G A2127 -108.558 -55.453 14.229 1.00 16.80 C
ATOM 25 P G A2128 -102.116 -53.176 13.996 1.00 37.60 P
ATOM 26 OP1 G A2128 -102.501 -51.801 13.591 1.00 31.74 O
ATOM 27 OP2 G A2128 -101.713 -54.176 12.946 1.00 31.74 O
ATOM 28 O5' G A2128 -100.960 -52.998 15.080 1.00 0.79 O
TER
ATOM 1 O3' C B2373 -105.474 -59.323 11.116 1.00 16.77 O
ATOM 2 P A B2374 -104.501 -59.212 12.403 1.00 3.77 P
ATOM 3 OP1 A B2374 -105.227 -59.791 13.557 1.00 8.89 O
ATOM 4 OP2 A B2374 -104.014 -57.814 12.491 1.00 8.89 O
ATOM 5 O5' A B2374 -103.255 -60.151 12.071 1.00 20.60 O
ATOM 6 C5' A B2374 -103.399 -61.590 11.942 1.00 20.60 C
ATOM 7 C4' A B2374 -102.077 -62.211 11.541 1.00 20.60 C
ATOM 8 O4' A B2374 -101.586 -61.442 10.421 1.00 20.60 O
ATOM 9 C3' A B2374 -100.994 -62.131 12.611 1.00 20.60 C
ATOM 10 O3' A B2374 -100.049 -63.188 12.422 1.00 20.60 O
ATOM 11 C2' A B2374 -100.317 -60.802 12.309 1.00 20.60 C
ATOM 12 O2' A B2374 -98.969 -60.745 12.696 1.00 20.60 O
ATOM 13 C1' A B2374 -100.422 -60.735 10.791 1.00 20.60 C
ATOM 14 N9 A B2374 -100.573 -59.366 10.319 1.00 6.32 N
ATOM 15 C8 A B2374 -101.458 -58.413 10.746 1.00 6.32 C
ATOM 16 N7 A B2374 -101.364 -57.284 10.100 1.00 6.32 N
ATOM 17 C5 A B2374 -100.347 -57.514 9.187 1.00 6.32 C
ATOM 18 C6 A B2374 -99.777 -56.711 8.194 1.00 6.32 C
ATOM 19 N6 A B2374 -100.188 -55.470 7.925 1.00 6.32 N
ATOM 20 N1 A B2374 -98.770 -57.233 7.465 1.00 6.32 N
ATOM 21 C2 A B2374 -98.390 -58.485 7.720 1.00 6.32 C
ATOM 22 N3 A B2374 -98.862 -59.342 8.619 1.00 6.32 N
ATOM 23 C4 A B2374 -99.847 -58.784 9.324 1.00 6.32 C
ATOM 24 P C B2375 -100.266 -64.612 13.144 1.00 9.37 P
ATOM 25 OP1 C B2375 -101.445 -64.554 14.073 1.00 12.65 O
ATOM 26 OP2 C B2375 -98.936 -65.100 13.638 1.00 12.65 O
ATOM 27 O5' C B2375 -100.715 -65.542 11.944 1.00 0.79 O
TER
Atoms:
OP1: (-108.105,-50.584,17.319)
OP2: (-108.604,-52.256,19.203)
C3': (-104.660,-53.435,14.517)
C1': (-106.022,-55.400,14.304)
C5': (-106.432,-52.547,16.113)
O6: (-111.831,-56.388,13.065)
O4': (-106.237,-54.866,15.599)
C8: (-107.548,-56.784,12.805)
C2: (-110.077,-54.347,15.376)
C6: (-110.854,-55.891,13.649)
C5: (-109.467,-56.132,13.449)
C4: (-108.558,-55.453,14.229)
P: (-107.652,-51.655,18.238)
C4': (-105.478,-53.647,15.774)
C2': (-105.368,-54.296,13.462)
O2': (-104.461,-54.840,12.504)
N1: (-111.064,-54.960,14.652)
N2: (-110.484,-53.480,16.305)
N3: (-108.791,-54.564,15.205)
N7: (-108.820,-56.974,12.563)
N9: (-107.319,-55.864,13.798)
O5': (-107.077,-52.836,17.353)
O3': (-103.333,-53.833,14.805)
OP2: (-108.604,-52.256,19.203)
C3': (-104.660,-53.435,14.517)
C1': (-106.022,-55.400,14.304)
C5': (-106.432,-52.547,16.113)
O6: (-111.831,-56.388,13.065)
O4': (-106.237,-54.866,15.599)
C8: (-107.548,-56.784,12.805)
C2: (-110.077,-54.347,15.376)
C6: (-110.854,-55.891,13.649)
C5: (-109.467,-56.132,13.449)
C4: (-108.558,-55.453,14.229)
P: (-107.652,-51.655,18.238)
C4': (-105.478,-53.647,15.774)
C2': (-105.368,-54.296,13.462)
O2': (-104.461,-54.840,12.504)
N1: (-111.064,-54.960,14.652)
N2: (-110.484,-53.480,16.305)
N3: (-108.791,-54.564,15.205)
N7: (-108.820,-56.974,12.563)
N9: (-107.319,-55.864,13.798)
O5': (-107.077,-52.836,17.353)
O3': (-103.333,-53.833,14.805)
OP1: (-105.227,-59.791,13.557)
OP2: (-104.014,-57.814,12.491)
C3': (-100.994,-62.131,12.611)
C1': (-100.422,-60.735,10.791)
C5': (-103.399,-61.590,11.942)
O4': (-101.586,-61.442,10.421)
C8: (-101.458,-58.413,10.746)
O2': (-98.969,-60.745,12.696)
C6: (-99.777,-56.711,8.194)
C5: (-100.347,-57.514,9.187)
C4: (-99.847,-58.784,9.324)
P: (-104.501,-59.212,12.403)
C4': (-102.077,-62.211,11.541)
C2': (-100.317,-60.802,12.309)
C2: (-98.390,-58.485,7.720)
N1: (-98.770,-57.233,7.465)
N3: (-98.862,-59.342,8.619)
N6: (-100.188,-55.470,7.925)
N7: (-101.364,-57.284,10.100)
N9: (-100.573,-59.366,10.319)
O5': (-103.255,-60.151,12.071)
O3': (-100.049,-63.188,12.422)
OP2: (-104.014,-57.814,12.491)
C3': (-100.994,-62.131,12.611)
C1': (-100.422,-60.735,10.791)
C5': (-103.399,-61.590,11.942)
O4': (-101.586,-61.442,10.421)
C8: (-101.458,-58.413,10.746)
O2': (-98.969,-60.745,12.696)
C6: (-99.777,-56.711,8.194)
C5: (-100.347,-57.514,9.187)
C4: (-99.847,-58.784,9.324)
P: (-104.501,-59.212,12.403)
C4': (-102.077,-62.211,11.541)
C2': (-100.317,-60.802,12.309)
C2: (-98.390,-58.485,7.720)
N1: (-98.770,-57.233,7.465)
N3: (-98.862,-59.342,8.619)
N6: (-100.188,-55.470,7.925)
N7: (-101.364,-57.284,10.100)
N9: (-100.573,-59.366,10.319)
O5': (-103.255,-60.151,12.071)
O3': (-100.049,-63.188,12.422)
Image (generated by PyMOL):