ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02418:02395

Extra

PDB:
ATOM 1 O3' A A2417 53.480 122.006 139.718 1.00 39.28 O
ATOM 2 P A A2418 53.498 121.903 138.109 1.00 39.38 P
ATOM 3 OP1 A A2418 52.275 122.575 137.610 1.00 39.34 O
ATOM 4 OP2 A A2418 53.773 120.495 137.723 1.00 37.69 O
ATOM 5 O5' A A2418 54.742 122.797 137.683 1.00 39.08 O
ATOM 6 C5' A A2418 54.887 124.129 138.200 1.00 40.74 C
ATOM 7 C4' A A2418 55.446 125.048 137.139 1.00 42.50 C
ATOM 8 O4' A A2418 56.795 124.618 136.806 1.00 41.38 O
ATOM 9 C3' A A2418 54.674 125.100 135.825 1.00 42.21 C
ATOM 10 O3' A A2418 54.706 126.421 135.277 1.00 41.78 O
ATOM 11 C2' A A2418 55.422 124.089 134.958 1.00 41.96 C
ATOM 12 O2' A A2418 55.303 124.366 133.574 1.00 44.53 O
ATOM 13 C1' A A2418 56.865 124.257 135.443 1.00 39.58 C
ATOM 14 N9 A A2418 57.679 123.042 135.359 1.00 36.25 N
ATOM 15 C8 A A2418 57.261 121.738 135.256 1.00 35.02 C
ATOM 16 N7 A A2418 58.241 120.871 135.205 1.00 34.46 N
ATOM 17 C5 A A2418 59.384 121.654 135.275 1.00 34.80 C
ATOM 18 C6 A A2418 60.756 121.333 135.247 1.00 35.69 C
ATOM 19 N6 A A2418 61.224 120.091 135.112 1.00 35.72 N
ATOM 20 N1 A A2418 61.643 122.348 135.347 1.00 35.33 N
ATOM 21 C2 A A2418 61.174 123.596 135.442 1.00 35.63 C
ATOM 22 N3 A A2418 59.911 124.025 135.461 1.00 36.51 N
ATOM 23 C4 A A2418 59.054 122.991 135.376 1.00 35.72 C
ATOM 24 P G A2419 53.326 127.144 134.860 1.00 43.11 P
ATOM 25 OP1 G A2419 52.203 126.437 135.533 1.00 43.52 O
ATOM 26 OP2 G A2419 53.306 127.308 133.384 1.00 45.23 O
ATOM 27 O5' G A2419 53.423 128.595 135.500 1.00 40.20 O
TER

ATOM 1 O3' A B2394 62.751 114.723 135.452 1.00 37.94 O
ATOM 2 P U B2395 62.740 115.503 136.856 1.00 40.98 P
ATOM 3 OP1 U B2395 64.016 115.177 137.536 1.00 41.47 O
ATOM 4 OP2 U B2395 61.456 115.265 137.563 1.00 41.24 O
ATOM 5 O5' U B2395 62.807 117.032 136.431 1.00 40.66 O
ATOM 6 C5' U B2395 63.931 117.538 135.690 1.00 38.94 C
ATOM 7 C4' U B2395 64.593 118.653 136.459 1.00 37.66 C
ATOM 8 O4' U B2395 63.653 119.752 136.627 1.00 36.64 O
ATOM 9 C3' U B2395 65.058 118.289 137.861 1.00 36.15 C
ATOM 10 O3' U B2395 66.157 119.120 138.163 1.00 37.03 O
ATOM 11 C2' U B2395 63.876 118.719 138.719 1.00 36.15 C
ATOM 12 O2' U B2395 64.236 119.002 140.055 1.00 38.75 O
ATOM 13 C1' U B2395 63.450 119.997 138.002 1.00 34.20 C
ATOM 14 N1 U B2395 62.048 120.390 138.200 1.00 31.33 N
ATOM 15 C2 U B2395 61.801 121.693 138.580 1.00 30.63 C
ATOM 16 O2 U B2395 62.685 122.513 138.749 1.00 32.27 O
ATOM 17 N3 U B2395 60.482 122.006 138.755 1.00 28.65 N
ATOM 18 C4 U B2395 59.408 121.174 138.589 1.00 28.67 C
ATOM 19 O4 U B2395 58.281 121.594 138.835 1.00 29.43 O
ATOM 20 C5 U B2395 59.739 119.844 138.188 1.00 29.35 C
ATOM 21 C6 U B2395 61.015 119.504 138.015 1.00 29.71 C
ATOM 22 P C B2396 67.569 118.477 138.544 1.00 38.54 P
ATOM 23 OP1 C B2396 68.125 117.794 137.353 1.00 40.05 O
ATOM 24 OP2 C B2396 67.373 117.712 139.796 1.00 39.94 O
ATOM 25 O5' C B2396 68.431 119.776 138.857 1.00 36.15 O
TER

Atoms:
OP1: (52.275,122.575,137.610)
OP2: (53.773,120.495,137.723)
C3': (54.674,125.100,135.825)
C1': (56.865,124.257,135.443)
C5': (54.887,124.129,138.200)
O4': (56.795,124.618,136.806)
C8: (57.261,121.738,135.256)
O2': (55.303,124.366,133.574)
C6: (60.756,121.333,135.247)
C5: (59.384,121.654,135.275)
C4: (59.054,122.991,135.376)
P: (53.498,121.903,138.109)
C4': (55.446,125.048,137.139)
C2': (55.422,124.089,134.958)
C2: (61.174,123.596,135.442)
N1: (61.643,122.348,135.347)
N3: (59.911,124.025,135.461)
N6: (61.224,120.091,135.112)
N7: (58.241,120.871,135.205)
N9: (57.679,123.042,135.359)
O5': (54.742,122.797,137.683)
O3': (54.706,126.421,135.277)
C4: (59.408,121.174,138.589)
N3: (60.482,122.006,138.755)
OP1: (64.016,115.177,137.536)
OP2: (61.456,115.265,137.563)
C2: (61.801,121.693,138.580)
C1': (63.450,119.997,138.002)
C3': (65.058,118.289,137.861)
O5': (62.807,117.032,136.431)
O4': (63.653,119.752,136.627)
C5': (63.931,117.538,135.690)
P: (62.740,115.503,136.856)
C4': (64.593,118.653,136.459)
C2': (63.876,118.719,138.719)
O2': (64.236,119.002,140.055)
N1: (62.048,120.390,138.200)
O4: (58.281,121.594,138.835)
O2: (62.685,122.513,138.749)
C6: (61.015,119.504,138.015)
C5: (59.739,119.844,138.188)
O3': (66.157,119.120,138.163)
Image (generated by PyMOL):
PyMOL image
show in jmol