Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1086:A1087
Extra
PDB:
ATOM 1 O3' C A1085 -116.074 -53.446 -55.329 1.00106.80 O
ATOM 2 P G A1086 -116.172 -51.857 -54.972 1.00115.01 P
ATOM 3 OP1 G A1086 -114.801 -51.403 -54.609 1.00115.01 O
ATOM 4 OP2 G A1086 -117.258 -51.695 -53.972 1.00115.01 O
ATOM 5 O5' G A1086 -116.614 -51.194 -56.357 1.00115.01 O
ATOM 6 C5' G A1086 -115.655 -50.793 -57.328 1.00115.01 C
ATOM 7 C4' G A1086 -116.262 -50.756 -58.706 1.00115.01 C
ATOM 8 O4' G A1086 -117.404 -51.660 -58.747 1.00115.01 O
ATOM 9 C3' G A1086 -116.842 -49.414 -59.154 1.00115.01 C
ATOM 10 O3' G A1086 -115.862 -48.504 -59.658 1.00115.01 O
ATOM 11 C2' G A1086 -117.885 -49.852 -60.180 1.00115.01 C
ATOM 12 O2' G A1086 -117.270 -50.276 -61.394 1.00115.01 O
ATOM 13 C1' G A1086 -118.460 -51.080 -59.483 1.00115.01 C
ATOM 14 N9 G A1086 -119.545 -50.724 -58.538 1.00113.84 N
ATOM 15 C8 G A1086 -119.498 -50.806 -57.164 1.00113.84 C
ATOM 16 N7 G A1086 -120.598 -50.417 -56.580 1.00113.84 N
ATOM 17 C5 G A1086 -121.438 -50.046 -57.622 1.00113.84 C
ATOM 18 C6 G A1086 -122.771 -49.536 -57.604 1.00113.84 C
ATOM 19 O6 G A1086 -123.506 -49.303 -56.638 1.00113.84 O
ATOM 20 N1 G A1086 -123.249 -49.294 -58.887 1.00113.84 N
ATOM 21 C2 G A1086 -122.543 -49.516 -60.045 1.00113.84 C
ATOM 22 N2 G A1086 -123.176 -49.223 -61.191 1.00113.84 N
ATOM 23 N3 G A1086 -121.302 -49.987 -60.076 1.00113.84 N
ATOM 24 C4 G A1086 -120.805 -50.232 -58.839 1.00113.84 C
ATOM 25 P U A1087 -116.222 -46.941 -59.904 1.00111.61 P
ATOM 26 OP1 U A1087 -115.042 -46.145 -59.458 1.00111.61 O
ATOM 27 OP2 U A1087 -117.536 -46.683 -59.257 1.00111.61 O
ATOM 28 O5' U A1087 -116.373 -46.859 -61.505 1.00111.61 O
TER
ATOM 1 O3' G B1086 -115.862 -48.504 -59.658 1.00115.01 O
ATOM 2 P U B1087 -116.222 -46.941 -59.904 1.00111.61 P
ATOM 3 OP1 U B1087 -115.042 -46.145 -59.458 1.00111.61 O
ATOM 4 OP2 U B1087 -117.536 -46.683 -59.257 1.00111.61 O
ATOM 5 O5' U B1087 -116.373 -46.859 -61.505 1.00111.61 O
ATOM 6 C5' U B1087 -116.872 -45.683 -62.153 1.00111.61 C
ATOM 7 C4' U B1087 -116.864 -45.808 -63.675 1.00111.61 C
ATOM 8 O4' U B1087 -117.844 -46.803 -64.097 1.00111.61 O
ATOM 9 C3' U B1087 -117.248 -44.542 -64.452 1.00111.61 C
ATOM 10 O3' U B1087 -116.151 -43.665 -64.675 1.00111.61 O
ATOM 11 C2' U B1087 -117.873 -45.089 -65.735 1.00111.61 C
ATOM 12 O2' U B1087 -116.877 -45.483 -66.673 1.00111.61 O
ATOM 13 C1' U B1087 -118.579 -46.335 -65.214 1.00111.61 C
ATOM 14 N1 U B1087 -119.954 -46.037 -64.760 1.00109.82 N
ATOM 15 C2 U B1087 -120.855 -45.416 -65.602 1.00109.82 C
ATOM 16 O2 U B1087 -120.598 -45.095 -66.743 1.00109.82 O
ATOM 17 N3 U B1087 -122.083 -45.194 -65.044 1.00109.82 N
ATOM 18 C4 U B1087 -122.479 -45.522 -63.759 1.00109.82 C
ATOM 19 O4 U B1087 -123.615 -45.266 -63.373 1.00109.82 O
ATOM 20 C5 U B1087 -121.497 -46.155 -62.949 1.00109.82 C
ATOM 21 C6 U B1087 -120.298 -46.380 -63.472 1.00109.82 C
ATOM 22 P A B1088 -115.966 -42.331 -63.781 1.00151.71 P
ATOM 23 OP1 A B1088 -114.714 -41.666 -64.241 1.00151.71 O
ATOM 24 OP2 A B1088 -116.081 -42.735 -62.349 1.00151.71 O
ATOM 25 O5' A B1088 -117.226 -41.453 -64.195 1.00151.71 O
TER
ATOM 2 P G A1086 -116.172 -51.857 -54.972 1.00115.01 P
ATOM 3 OP1 G A1086 -114.801 -51.403 -54.609 1.00115.01 O
ATOM 4 OP2 G A1086 -117.258 -51.695 -53.972 1.00115.01 O
ATOM 5 O5' G A1086 -116.614 -51.194 -56.357 1.00115.01 O
ATOM 6 C5' G A1086 -115.655 -50.793 -57.328 1.00115.01 C
ATOM 7 C4' G A1086 -116.262 -50.756 -58.706 1.00115.01 C
ATOM 8 O4' G A1086 -117.404 -51.660 -58.747 1.00115.01 O
ATOM 9 C3' G A1086 -116.842 -49.414 -59.154 1.00115.01 C
ATOM 10 O3' G A1086 -115.862 -48.504 -59.658 1.00115.01 O
ATOM 11 C2' G A1086 -117.885 -49.852 -60.180 1.00115.01 C
ATOM 12 O2' G A1086 -117.270 -50.276 -61.394 1.00115.01 O
ATOM 13 C1' G A1086 -118.460 -51.080 -59.483 1.00115.01 C
ATOM 14 N9 G A1086 -119.545 -50.724 -58.538 1.00113.84 N
ATOM 15 C8 G A1086 -119.498 -50.806 -57.164 1.00113.84 C
ATOM 16 N7 G A1086 -120.598 -50.417 -56.580 1.00113.84 N
ATOM 17 C5 G A1086 -121.438 -50.046 -57.622 1.00113.84 C
ATOM 18 C6 G A1086 -122.771 -49.536 -57.604 1.00113.84 C
ATOM 19 O6 G A1086 -123.506 -49.303 -56.638 1.00113.84 O
ATOM 20 N1 G A1086 -123.249 -49.294 -58.887 1.00113.84 N
ATOM 21 C2 G A1086 -122.543 -49.516 -60.045 1.00113.84 C
ATOM 22 N2 G A1086 -123.176 -49.223 -61.191 1.00113.84 N
ATOM 23 N3 G A1086 -121.302 -49.987 -60.076 1.00113.84 N
ATOM 24 C4 G A1086 -120.805 -50.232 -58.839 1.00113.84 C
ATOM 25 P U A1087 -116.222 -46.941 -59.904 1.00111.61 P
ATOM 26 OP1 U A1087 -115.042 -46.145 -59.458 1.00111.61 O
ATOM 27 OP2 U A1087 -117.536 -46.683 -59.257 1.00111.61 O
ATOM 28 O5' U A1087 -116.373 -46.859 -61.505 1.00111.61 O
TER
ATOM 1 O3' G B1086 -115.862 -48.504 -59.658 1.00115.01 O
ATOM 2 P U B1087 -116.222 -46.941 -59.904 1.00111.61 P
ATOM 3 OP1 U B1087 -115.042 -46.145 -59.458 1.00111.61 O
ATOM 4 OP2 U B1087 -117.536 -46.683 -59.257 1.00111.61 O
ATOM 5 O5' U B1087 -116.373 -46.859 -61.505 1.00111.61 O
ATOM 6 C5' U B1087 -116.872 -45.683 -62.153 1.00111.61 C
ATOM 7 C4' U B1087 -116.864 -45.808 -63.675 1.00111.61 C
ATOM 8 O4' U B1087 -117.844 -46.803 -64.097 1.00111.61 O
ATOM 9 C3' U B1087 -117.248 -44.542 -64.452 1.00111.61 C
ATOM 10 O3' U B1087 -116.151 -43.665 -64.675 1.00111.61 O
ATOM 11 C2' U B1087 -117.873 -45.089 -65.735 1.00111.61 C
ATOM 12 O2' U B1087 -116.877 -45.483 -66.673 1.00111.61 O
ATOM 13 C1' U B1087 -118.579 -46.335 -65.214 1.00111.61 C
ATOM 14 N1 U B1087 -119.954 -46.037 -64.760 1.00109.82 N
ATOM 15 C2 U B1087 -120.855 -45.416 -65.602 1.00109.82 C
ATOM 16 O2 U B1087 -120.598 -45.095 -66.743 1.00109.82 O
ATOM 17 N3 U B1087 -122.083 -45.194 -65.044 1.00109.82 N
ATOM 18 C4 U B1087 -122.479 -45.522 -63.759 1.00109.82 C
ATOM 19 O4 U B1087 -123.615 -45.266 -63.373 1.00109.82 O
ATOM 20 C5 U B1087 -121.497 -46.155 -62.949 1.00109.82 C
ATOM 21 C6 U B1087 -120.298 -46.380 -63.472 1.00109.82 C
ATOM 22 P A B1088 -115.966 -42.331 -63.781 1.00151.71 P
ATOM 23 OP1 A B1088 -114.714 -41.666 -64.241 1.00151.71 O
ATOM 24 OP2 A B1088 -116.081 -42.735 -62.349 1.00151.71 O
ATOM 25 O5' A B1088 -117.226 -41.453 -64.195 1.00151.71 O
TER
Atoms:
OP1: (-114.801,-51.403,-54.609)
OP2: (-117.258,-51.695,-53.972)
C3': (-116.842,-49.414,-59.154)
C1': (-118.460,-51.080,-59.483)
C5': (-115.655,-50.793,-57.328)
O6: (-123.506,-49.303,-56.638)
O4': (-117.404,-51.660,-58.747)
C8: (-119.498,-50.806,-57.164)
C2: (-122.543,-49.516,-60.045)
C6: (-122.771,-49.536,-57.604)
C5: (-121.438,-50.046,-57.622)
C4: (-120.805,-50.232,-58.839)
P: (-116.172,-51.857,-54.972)
C4': (-116.262,-50.756,-58.706)
C2': (-117.885,-49.852,-60.180)
O2': (-117.270,-50.276,-61.394)
N1: (-123.249,-49.294,-58.887)
N2: (-123.176,-49.223,-61.191)
N3: (-121.302,-49.987,-60.076)
N7: (-120.598,-50.417,-56.580)
N9: (-119.545,-50.724,-58.538)
O5': (-116.614,-51.194,-56.357)
O3': (-115.862,-48.504,-59.658)
OP2: (-117.258,-51.695,-53.972)
C3': (-116.842,-49.414,-59.154)
C1': (-118.460,-51.080,-59.483)
C5': (-115.655,-50.793,-57.328)
O6: (-123.506,-49.303,-56.638)
O4': (-117.404,-51.660,-58.747)
C8: (-119.498,-50.806,-57.164)
C2: (-122.543,-49.516,-60.045)
C6: (-122.771,-49.536,-57.604)
C5: (-121.438,-50.046,-57.622)
C4: (-120.805,-50.232,-58.839)
P: (-116.172,-51.857,-54.972)
C4': (-116.262,-50.756,-58.706)
C2': (-117.885,-49.852,-60.180)
O2': (-117.270,-50.276,-61.394)
N1: (-123.249,-49.294,-58.887)
N2: (-123.176,-49.223,-61.191)
N3: (-121.302,-49.987,-60.076)
N7: (-120.598,-50.417,-56.580)
N9: (-119.545,-50.724,-58.538)
O5': (-116.614,-51.194,-56.357)
O3': (-115.862,-48.504,-59.658)
C4: (-122.479,-45.522,-63.759)
N3: (-122.083,-45.194,-65.044)
OP1: (-115.042,-46.145,-59.458)
OP2: (-117.536,-46.683,-59.257)
C2: (-120.855,-45.416,-65.602)
C1': (-118.579,-46.335,-65.214)
C3': (-117.248,-44.542,-64.452)
O5': (-116.373,-46.859,-61.505)
O4': (-117.844,-46.803,-64.097)
C5': (-116.872,-45.683,-62.153)
P: (-116.222,-46.941,-59.904)
C4': (-116.864,-45.808,-63.675)
C2': (-117.873,-45.089,-65.735)
O2': (-116.877,-45.483,-66.673)
N1: (-119.954,-46.037,-64.760)
O4: (-123.615,-45.266,-63.373)
O2: (-120.598,-45.095,-66.743)
C6: (-120.298,-46.380,-63.472)
C5: (-121.497,-46.155,-62.949)
O3': (-116.151,-43.665,-64.675)
N3: (-122.083,-45.194,-65.044)
OP1: (-115.042,-46.145,-59.458)
OP2: (-117.536,-46.683,-59.257)
C2: (-120.855,-45.416,-65.602)
C1': (-118.579,-46.335,-65.214)
C3': (-117.248,-44.542,-64.452)
O5': (-116.373,-46.859,-61.505)
O4': (-117.844,-46.803,-64.097)
C5': (-116.872,-45.683,-62.153)
P: (-116.222,-46.941,-59.904)
C4': (-116.864,-45.808,-63.675)
C2': (-117.873,-45.089,-65.735)
O2': (-116.877,-45.483,-66.673)
N1: (-119.954,-46.037,-64.760)
O4: (-123.615,-45.266,-63.373)
O2: (-120.598,-45.095,-66.743)
C6: (-120.298,-46.380,-63.472)
C5: (-121.497,-46.155,-62.949)
O3': (-116.151,-43.665,-64.675)
Image (generated by PyMOL):