Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2517:2518
Extra
PDB:
ATOM 1 O3' U A 516 -76.587 49.605 19.199 1.00116.80 O
ATOM 2 P A A 517 -76.174 51.097 19.644 1.00119.56 P
ATOM 3 OP1 A A 517 -75.025 51.507 18.800 1.00119.65 O
ATOM 4 OP2 A A 517 -76.005 51.082 21.118 1.00119.03 O
ATOM 5 O5' A A 517 -77.473 51.951 19.251 1.00119.82 O
ATOM 6 C5' A A 517 -77.970 51.964 17.916 1.00120.35 C
ATOM 7 C4' A A 517 -79.268 52.722 17.817 1.00120.51 C
ATOM 8 O4' A A 517 -80.271 52.116 18.667 1.00120.41 O
ATOM 9 C3' A A 517 -79.222 54.153 18.286 1.00120.24 C
ATOM 10 O3' A A 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 11 C2' A A 517 -80.674 54.457 18.609 1.00120.32 C
ATOM 12 O2' A A 517 -81.388 54.768 17.428 1.00120.80 O
ATOM 13 C1' A A 517 -81.165 53.109 19.132 1.00120.31 C
ATOM 14 N9 A A 517 -81.198 53.070 20.604 1.00119.81 N
ATOM 15 C8 A A 517 -80.358 52.382 21.438 1.00119.45 C
ATOM 16 N7 A A 517 -80.631 52.542 22.713 1.00119.04 N
ATOM 17 C5 A A 517 -81.719 53.394 22.722 1.00119.14 C
ATOM 18 C6 A A 517 -82.476 53.939 23.770 1.00118.85 C
ATOM 19 N6 A A 517 -82.248 53.701 25.059 1.00118.39 N
ATOM 20 N1 A A 517 -83.498 54.747 23.448 1.00119.05 N
ATOM 21 C2 A A 517 -83.724 54.973 22.151 1.00119.51 C
ATOM 22 N3 A A 517 -83.086 54.518 21.077 1.00119.82 N
ATOM 23 C4 A A 517 -82.077 53.725 21.431 1.00119.61 C
ATOM 24 P C A 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 25 OP1 C A 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 26 OP2 C A 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 27 O5' C A 518 -79.453 57.356 17.090 1.00118.27 O
TER
ATOM 1 O3' A B 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 2 P C B 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 3 OP1 C B 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 4 OP2 C B 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 5 O5' C B 518 -79.453 57.356 17.090 1.00118.27 O
ATOM 6 C5' C B 518 -80.332 58.116 17.902 1.00118.07 C
ATOM 7 C4' C B 518 -81.235 58.995 17.077 1.00118.42 C
ATOM 8 O4' C B 518 -82.553 58.397 17.002 1.00118.68 O
ATOM 9 C3' C B 518 -81.479 60.390 17.631 1.00118.16 C
ATOM 10 O3' C B 518 -80.452 61.311 17.277 1.00118.07 O
ATOM 11 C2' C B 518 -82.853 60.756 17.074 1.00118.53 C
ATOM 12 O2' C B 518 -82.742 61.283 15.762 1.00118.93 O
ATOM 13 C1' C B 518 -83.546 59.395 17.001 1.00118.75 C
ATOM 14 N1 C B 518 -84.442 59.160 18.147 1.00118.51 N
ATOM 15 C2 C B 518 -85.764 59.608 18.104 1.00118.68 C
ATOM 16 O2 C B 518 -86.183 60.217 17.107 1.00119.04 O
ATOM 17 N3 C B 518 -86.573 59.373 19.156 1.00118.46 N
ATOM 18 C4 C B 518 -86.098 58.722 20.211 1.00118.07 C
ATOM 19 N4 C B 518 -86.927 58.514 21.227 1.00117.86 N
ATOM 20 C5 C B 518 -84.767 58.247 20.287 1.00117.89 C
ATOM 21 C6 C B 518 -83.987 58.483 19.234 1.00118.12 C
ATOM 22 P A B 519 -79.897 62.379 18.356 1.00 99.57 P
ATOM 23 OP1 A B 519 -79.367 63.539 17.590 1.00 99.68 O
ATOM 24 OP2 A B 519 -78.969 61.653 19.274 1.00 99.17 O
ATOM 25 O5' A B 519 -81.227 62.803 19.150 1.00 99.46 O
TER
ATOM 2 P A A 517 -76.174 51.097 19.644 1.00119.56 P
ATOM 3 OP1 A A 517 -75.025 51.507 18.800 1.00119.65 O
ATOM 4 OP2 A A 517 -76.005 51.082 21.118 1.00119.03 O
ATOM 5 O5' A A 517 -77.473 51.951 19.251 1.00119.82 O
ATOM 6 C5' A A 517 -77.970 51.964 17.916 1.00120.35 C
ATOM 7 C4' A A 517 -79.268 52.722 17.817 1.00120.51 C
ATOM 8 O4' A A 517 -80.271 52.116 18.667 1.00120.41 O
ATOM 9 C3' A A 517 -79.222 54.153 18.286 1.00120.24 C
ATOM 10 O3' A A 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 11 C2' A A 517 -80.674 54.457 18.609 1.00120.32 C
ATOM 12 O2' A A 517 -81.388 54.768 17.428 1.00120.80 O
ATOM 13 C1' A A 517 -81.165 53.109 19.132 1.00120.31 C
ATOM 14 N9 A A 517 -81.198 53.070 20.604 1.00119.81 N
ATOM 15 C8 A A 517 -80.358 52.382 21.438 1.00119.45 C
ATOM 16 N7 A A 517 -80.631 52.542 22.713 1.00119.04 N
ATOM 17 C5 A A 517 -81.719 53.394 22.722 1.00119.14 C
ATOM 18 C6 A A 517 -82.476 53.939 23.770 1.00118.85 C
ATOM 19 N6 A A 517 -82.248 53.701 25.059 1.00118.39 N
ATOM 20 N1 A A 517 -83.498 54.747 23.448 1.00119.05 N
ATOM 21 C2 A A 517 -83.724 54.973 22.151 1.00119.51 C
ATOM 22 N3 A A 517 -83.086 54.518 21.077 1.00119.82 N
ATOM 23 C4 A A 517 -82.077 53.725 21.431 1.00119.61 C
ATOM 24 P C A 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 25 OP1 C A 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 26 OP2 C A 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 27 O5' C A 518 -79.453 57.356 17.090 1.00118.27 O
TER
ATOM 1 O3' A B 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 2 P C B 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 3 OP1 C B 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 4 OP2 C B 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 5 O5' C B 518 -79.453 57.356 17.090 1.00118.27 O
ATOM 6 C5' C B 518 -80.332 58.116 17.902 1.00118.07 C
ATOM 7 C4' C B 518 -81.235 58.995 17.077 1.00118.42 C
ATOM 8 O4' C B 518 -82.553 58.397 17.002 1.00118.68 O
ATOM 9 C3' C B 518 -81.479 60.390 17.631 1.00118.16 C
ATOM 10 O3' C B 518 -80.452 61.311 17.277 1.00118.07 O
ATOM 11 C2' C B 518 -82.853 60.756 17.074 1.00118.53 C
ATOM 12 O2' C B 518 -82.742 61.283 15.762 1.00118.93 O
ATOM 13 C1' C B 518 -83.546 59.395 17.001 1.00118.75 C
ATOM 14 N1 C B 518 -84.442 59.160 18.147 1.00118.51 N
ATOM 15 C2 C B 518 -85.764 59.608 18.104 1.00118.68 C
ATOM 16 O2 C B 518 -86.183 60.217 17.107 1.00119.04 O
ATOM 17 N3 C B 518 -86.573 59.373 19.156 1.00118.46 N
ATOM 18 C4 C B 518 -86.098 58.722 20.211 1.00118.07 C
ATOM 19 N4 C B 518 -86.927 58.514 21.227 1.00117.86 N
ATOM 20 C5 C B 518 -84.767 58.247 20.287 1.00117.89 C
ATOM 21 C6 C B 518 -83.987 58.483 19.234 1.00118.12 C
ATOM 22 P A B 519 -79.897 62.379 18.356 1.00 99.57 P
ATOM 23 OP1 A B 519 -79.367 63.539 17.590 1.00 99.68 O
ATOM 24 OP2 A B 519 -78.969 61.653 19.274 1.00 99.17 O
ATOM 25 O5' A B 519 -81.227 62.803 19.150 1.00 99.46 O
TER
Atoms:
OP1: (-75.025,51.507,18.800)
OP2: (-76.005,51.082,21.118)
C3': (-79.222,54.153,18.286)
C1': (-81.165,53.109,19.132)
C5': (-77.970,51.964,17.916)
O4': (-80.271,52.116,18.667)
C8: (-80.358,52.382,21.438)
O2': (-81.388,54.768,17.428)
C6: (-82.476,53.939,23.770)
C5: (-81.719,53.394,22.722)
C4: (-82.077,53.725,21.431)
P: (-76.174,51.097,19.644)
C4': (-79.268,52.722,17.817)
C2': (-80.674,54.457,18.609)
C2: (-83.724,54.973,22.151)
N1: (-83.498,54.747,23.448)
N3: (-83.086,54.518,21.077)
N6: (-82.248,53.701,25.059)
N7: (-80.631,52.542,22.713)
N9: (-81.198,53.070,20.604)
O5': (-77.473,51.951,19.251)
O3': (-78.674,55.013,17.325)
OP2: (-76.005,51.082,21.118)
C3': (-79.222,54.153,18.286)
C1': (-81.165,53.109,19.132)
C5': (-77.970,51.964,17.916)
O4': (-80.271,52.116,18.667)
C8: (-80.358,52.382,21.438)
O2': (-81.388,54.768,17.428)
C6: (-82.476,53.939,23.770)
C5: (-81.719,53.394,22.722)
C4: (-82.077,53.725,21.431)
P: (-76.174,51.097,19.644)
C4': (-79.268,52.722,17.817)
C2': (-80.674,54.457,18.609)
C2: (-83.724,54.973,22.151)
N1: (-83.498,54.747,23.448)
N3: (-83.086,54.518,21.077)
N6: (-82.248,53.701,25.059)
N7: (-80.631,52.542,22.713)
N9: (-81.198,53.070,20.604)
O5': (-77.473,51.951,19.251)
O3': (-78.674,55.013,17.325)
C2: (-85.764,59.608,18.104)
OP1: (-76.983,56.812,17.093)
OP2: (-78.379,56.565,19.233)
C4: (-86.098,58.722,20.211)
O5': (-79.453,57.356,17.090)
C3': (-81.479,60.390,17.631)
C1': (-83.546,59.395,17.001)
O4': (-82.553,58.397,17.002)
C5': (-80.332,58.116,17.902)
P: (-78.285,56.498,17.745)
O2: (-86.183,60.217,17.107)
C4': (-81.235,58.995,17.077)
C2': (-82.853,60.756,17.074)
O2': (-82.742,61.283,15.762)
N1: (-84.442,59.160,18.147)
N3: (-86.573,59.373,19.156)
N4: (-86.927,58.514,21.227)
C6: (-83.987,58.483,19.234)
C5: (-84.767,58.247,20.287)
O3': (-80.452,61.311,17.277)
OP1: (-76.983,56.812,17.093)
OP2: (-78.379,56.565,19.233)
C4: (-86.098,58.722,20.211)
O5': (-79.453,57.356,17.090)
C3': (-81.479,60.390,17.631)
C1': (-83.546,59.395,17.001)
O4': (-82.553,58.397,17.002)
C5': (-80.332,58.116,17.902)
P: (-78.285,56.498,17.745)
O2: (-86.183,60.217,17.107)
C4': (-81.235,58.995,17.077)
C2': (-82.853,60.756,17.074)
O2': (-82.742,61.283,15.762)
N1: (-84.442,59.160,18.147)
N3: (-86.573,59.373,19.156)
N4: (-86.927,58.514,21.227)
C6: (-83.987,58.483,19.234)
C5: (-84.767,58.247,20.287)
O3': (-80.452,61.311,17.277)
Image (generated by PyMOL):