ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5342:5343

Extra

PDB:
ATOM 1 O3' A A 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 2 P G A 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 3 OP1 G A 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 4 OP2 G A 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 5 O5' G A 342 115.166 -6.474 200.877 1.00 43.72 O
ATOM 6 C5' G A 342 114.239 -7.493 200.588 1.00 44.04 C
ATOM 7 C4' G A 342 113.829 -7.456 199.156 1.00 44.52 C
ATOM 8 O4' G A 342 113.212 -6.182 198.864 1.00 44.59 O
ATOM 9 C3' G A 342 114.944 -7.540 198.139 1.00 44.66 C
ATOM 10 O3' G A 342 115.457 -8.848 197.979 1.00 44.77 O
ATOM 11 C2' G A 342 114.261 -6.995 196.901 1.00 45.10 C
ATOM 12 O2' G A 342 113.360 -7.944 196.388 1.00 45.49 O
ATOM 13 C1' G A 342 113.440 -5.855 197.500 1.00 44.93 C
ATOM 14 N9 G A 342 114.164 -4.575 197.432 1.00 44.73 N
ATOM 15 C8 G A 342 114.804 -3.957 198.446 1.00 44.27 C
ATOM 16 N7 G A 342 115.373 -2.855 198.069 1.00 44.21 N
ATOM 17 C5 G A 342 115.075 -2.757 196.745 1.00 44.65 C
ATOM 18 C6 G A 342 115.400 -1.775 195.815 1.00 44.82 C
ATOM 19 O6 G A 342 116.036 -0.780 195.965 1.00 44.61 O
ATOM 20 N1 G A 342 114.948 -1.979 194.570 1.00 45.30 N
ATOM 21 C2 G A 342 114.246 -3.043 194.260 1.00 45.59 C
ATOM 22 N2 G A 342 113.913 -3.012 192.976 1.00 46.06 N
ATOM 23 N3 G A 342 113.893 -3.995 195.098 1.00 45.45 N
ATOM 24 C4 G A 342 114.332 -3.789 196.330 1.00 44.98 C
ATOM 25 P C A 343 117.042 -9.075 197.949 1.00 40.76 P
ATOM 26 OP1 C A 343 117.291 -10.487 197.638 1.00 40.98 O
ATOM 27 OP2 C A 343 117.612 -8.518 199.218 1.00 40.24 O
ATOM 28 O5' C A 343 117.475 -8.162 196.730 1.00 40.98 O
TER

ATOM 1 O3' G B 342 115.457 -8.848 197.979 1.00 44.77 O
ATOM 2 P C B 343 117.042 -9.075 197.949 1.00 40.76 P
ATOM 3 OP1 C B 343 117.291 -10.487 197.638 1.00 40.98 O
ATOM 4 OP2 C B 343 117.612 -8.518 199.218 1.00 40.24 O
ATOM 5 O5' C B 343 117.475 -8.162 196.730 1.00 40.98 O
ATOM 6 C5' C B 343 118.546 -7.222 196.834 1.00 40.70 C
ATOM 7 C4' C B 343 119.410 -7.259 195.598 1.00 40.98 C
ATOM 8 O4' C B 343 118.606 -7.052 194.421 1.00 41.45 O
ATOM 9 C3' C B 343 120.495 -6.215 195.482 1.00 40.77 C
ATOM 10 O3' C B 343 121.636 -6.556 196.254 1.00 40.42 O
ATOM 11 C2' C B 343 120.776 -6.205 193.973 1.00 41.22 C
ATOM 12 O2' C B 343 121.731 -7.196 193.633 1.00 41.31 O
ATOM 13 C1' C B 343 119.424 -6.625 193.373 1.00 41.64 C
ATOM 14 N1 C B 343 118.751 -5.533 192.677 1.00 41.86 N
ATOM 15 C2 C B 343 118.764 -5.510 191.284 1.00 42.32 C
ATOM 16 O2 C B 343 119.294 -6.409 190.631 1.00 42.56 O
ATOM 17 N3 C B 343 118.149 -4.481 190.671 1.00 42.53 N
ATOM 18 C4 C B 343 117.562 -3.531 191.409 1.00 42.27 C
ATOM 19 N4 C B 343 116.939 -2.547 190.753 1.00 42.51 N
ATOM 20 C5 C B 343 117.553 -3.523 192.828 1.00 41.80 C
ATOM 21 C6 C B 343 118.140 -4.548 193.414 1.00 41.61 C
ATOM 22 P G B 344 122.136 -5.638 197.474 1.00 44.64 P
ATOM 23 OP1 G B 344 123.354 -6.284 197.991 1.00 44.39 O
ATOM 24 OP2 G B 344 120.994 -5.420 198.397 1.00 44.48 O
ATOM 25 O5' G B 344 122.504 -4.284 196.765 1.00 44.69 O
TER

Atoms:
OP1: (116.134,-7.749,202.867)
OP2: (116.951,-5.418,202.243)
C3': (114.944,-7.540,198.139)
C1': (113.440,-5.855,197.500)
C5': (114.239,-7.493,200.588)
O6: (116.036,-0.780,195.965)
O4': (113.212,-6.182,198.864)
C8: (114.804,-3.957,198.446)
C2: (114.246,-3.043,194.260)
C6: (115.400,-1.775,195.815)
C5: (115.075,-2.757,196.745)
C4: (114.332,-3.789,196.330)
P: (115.865,-6.381,202.321)
C4': (113.829,-7.456,199.156)
C2': (114.261,-6.995,196.901)
O2': (113.360,-7.944,196.388)
N1: (114.948,-1.979,194.570)
N2: (113.913,-3.012,192.976)
N3: (113.893,-3.995,195.098)
N7: (115.373,-2.855,198.069)
N9: (114.164,-4.575,197.432)
O5': (115.166,-6.474,200.877)
O3': (115.457,-8.848,197.979)
C2: (118.764,-5.510,191.284)
OP1: (117.291,-10.487,197.638)
OP2: (117.612,-8.518,199.218)
C4: (117.562,-3.531,191.409)
O5': (117.475,-8.162,196.730)
C3': (120.495,-6.215,195.482)
C1': (119.424,-6.625,193.373)
O4': (118.606,-7.052,194.421)
C5': (118.546,-7.222,196.834)
P: (117.042,-9.075,197.949)
O2: (119.294,-6.409,190.631)
C4': (119.410,-7.259,195.598)
C2': (120.776,-6.205,193.973)
O2': (121.731,-7.196,193.633)
N1: (118.751,-5.533,192.677)
N3: (118.149,-4.481,190.671)
N4: (116.939,-2.547,190.753)
C6: (118.140,-4.548,193.414)
C5: (117.553,-3.523,192.828)
O3': (121.636,-6.556,196.254)
Image (generated by PyMOL):
PyMOL image
show in jmol