ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A1976:A815

Extra

PDB:
ATOM 1 O3' A A1975 -18.977 132.339 174.649 1.00 21.72 O
ATOM 2 P A A1976 -19.256 133.438 175.777 1.00 13.71 P
ATOM 3 OP1 A A1976 -18.664 134.712 175.338 1.00 18.48 O
ATOM 4 OP2 A A1976 -18.879 132.900 177.091 1.00 18.48 O
ATOM 5 O5' A A1976 -20.841 133.529 175.712 1.00 19.33 O
ATOM 6 C5' A A1976 -21.590 134.087 176.775 1.00 19.33 C
ATOM 7 C4' A A1976 -23.035 133.680 176.657 1.00 19.33 C
ATOM 8 O4' A A1976 -23.769 134.314 177.742 1.00 19.33 O
ATOM 9 C3' A A1976 -23.718 134.109 175.367 1.00 19.33 C
ATOM 10 O3' A A1976 -24.675 133.131 175.007 1.00 19.33 O
ATOM 11 C2' A A1976 -24.445 135.384 175.766 1.00 19.33 C
ATOM 12 O2' A A1976 -25.630 135.587 175.030 1.00 19.33 O
ATOM 13 C1' A A1976 -24.814 135.090 177.215 1.00 19.33 C
ATOM 14 N9 A A1976 -24.957 136.303 178.011 1.00 5.76 N
ATOM 15 C8 A A1976 -23.995 137.079 178.588 1.00 5.76 C
ATOM 16 N7 A A1976 -24.470 138.148 179.183 1.00 5.76 N
ATOM 17 C5 A A1976 -25.837 138.052 178.990 1.00 5.76 C
ATOM 18 C6 A A1976 -26.899 138.884 179.355 1.00 5.76 C
ATOM 19 N6 A A1976 -26.744 140.033 180.008 1.00 5.76 N
ATOM 20 N1 A A1976 -28.145 138.502 179.014 1.00 5.76 N
ATOM 21 C2 A A1976 -28.296 137.363 178.345 1.00 5.76 C
ATOM 22 N3 A A1976 -27.374 136.501 177.934 1.00 5.76 N
ATOM 23 C4 A A1976 -26.150 136.913 178.291 1.00 5.76 C
ATOM 24 P G A1977 -25.222 133.069 173.500 1.00 2.02 P
ATOM 25 OP1 G A1977 -24.494 134.093 172.704 1.00 4.48 O
ATOM 26 OP2 G A1977 -26.726 133.065 173.518 1.00 4.48 O
ATOM 27 O5' G A1977 -24.692 131.666 172.966 1.00 12.01 O
TER

ATOM 1 O3' C B 814 -35.442 142.877 176.319 1.00 0.79 O
ATOM 2 P U B 815 -35.746 142.763 177.876 1.00 1.29 P
ATOM 3 OP1 U B 815 -36.685 141.648 178.090 1.00 1.29 O
ATOM 4 OP2 U B 815 -36.114 144.127 178.318 1.00 1.29 O
ATOM 5 O5' U B 815 -34.342 142.305 178.472 1.00 3.67 O
ATOM 6 C5' U B 815 -33.839 140.988 178.148 1.00 3.67 C
ATOM 7 C4' U B 815 -32.471 140.739 178.748 1.00 3.67 C
ATOM 8 O4' U B 815 -31.439 141.434 178.014 1.00 3.67 O
ATOM 9 C3' U B 815 -32.228 141.104 180.203 1.00 3.67 C
ATOM 10 O3' U B 815 -32.715 140.103 181.079 1.00 3.67 O
ATOM 11 C2' U B 815 -30.710 141.161 180.273 1.00 3.67 C
ATOM 12 O2' U B 815 -30.135 139.890 180.486 1.00 3.67 O
ATOM 13 C1' U B 815 -30.344 141.679 178.880 1.00 3.67 C
ATOM 14 N1 U B 815 -30.068 143.119 178.904 1.00 17.60 N
ATOM 15 C2 U B 815 -28.803 143.517 179.285 1.00 17.60 C
ATOM 16 O2 U B 815 -27.928 142.734 179.601 1.00 17.60 O
ATOM 17 N3 U B 815 -28.600 144.870 179.290 1.00 17.60 N
ATOM 18 C4 U B 815 -29.517 145.844 178.967 1.00 17.60 C
ATOM 19 O4 U B 815 -29.192 147.029 179.037 1.00 17.60 O
ATOM 20 C5 U B 815 -30.804 145.350 178.588 1.00 17.60 C
ATOM 21 C6 U B 815 -31.028 144.037 178.568 1.00 17.60 C
ATOM 22 P G B 816 -32.985 140.458 182.615 1.00 26.86 P
ATOM 23 OP1 G B 816 -33.530 139.224 183.237 1.00 29.52 O
ATOM 24 OP2 G B 816 -33.754 141.721 182.698 1.00 29.52 O
ATOM 25 O5' G B 816 -31.531 140.746 183.191 1.00 17.76 O
TER

Atoms:
OP1: (-18.664,134.712,175.338)
OP2: (-18.879,132.900,177.091)
C3': (-23.718,134.109,175.367)
C1': (-24.814,135.090,177.215)
C5': (-21.590,134.087,176.775)
O4': (-23.769,134.314,177.742)
C8: (-23.995,137.079,178.588)
O2': (-25.630,135.587,175.030)
C6: (-26.899,138.884,179.355)
C5: (-25.837,138.052,178.990)
C4: (-26.150,136.913,178.291)
P: (-19.256,133.438,175.777)
C4': (-23.035,133.680,176.657)
C2': (-24.445,135.384,175.766)
C2: (-28.296,137.363,178.345)
N1: (-28.145,138.502,179.014)
N3: (-27.374,136.501,177.934)
N6: (-26.744,140.033,180.008)
N7: (-24.470,138.148,179.183)
N9: (-24.957,136.303,178.011)
O5': (-20.841,133.529,175.712)
O3': (-24.675,133.131,175.007)
C4: (-29.517,145.844,178.967)
N3: (-28.600,144.870,179.290)
OP1: (-36.685,141.648,178.090)
OP2: (-36.114,144.127,178.318)
C2: (-28.803,143.517,179.285)
C1': (-30.344,141.679,178.880)
C3': (-32.228,141.104,180.203)
O5': (-34.342,142.305,178.472)
O4': (-31.439,141.434,178.014)
C5': (-33.839,140.988,178.148)
P: (-35.746,142.763,177.876)
C4': (-32.471,140.739,178.748)
C2': (-30.710,141.161,180.273)
O2': (-30.135,139.890,180.486)
N1: (-30.068,143.119,178.904)
O4: (-29.192,147.029,179.037)
O2: (-27.928,142.734,179.601)
C6: (-31.028,144.037,178.568)
C5: (-30.804,145.350,178.588)
O3': (-32.715,140.103,181.079)
Image (generated by PyMOL):
PyMOL image
show in jmol