Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A225:A399
Extra
PDB:
ATOM 1 O3' U A 224 -42.529 186.470 169.362 1.00 27.36 O
ATOM 2 P A A 225 -43.071 185.855 167.985 1.00 20.24 P
ATOM 3 OP1 A A 225 -44.479 186.293 167.810 1.00 27.11 O
ATOM 4 OP2 A A 225 -42.743 184.406 167.974 1.00 27.11 O
ATOM 5 O5' A A 225 -42.158 186.550 166.884 1.00 1.09 O
ATOM 6 C5' A A 225 -42.020 187.963 166.858 1.00 1.09 C
ATOM 7 C4' A A 225 -41.002 188.382 165.826 1.00 1.09 C
ATOM 8 O4' A A 225 -39.664 188.061 166.269 1.00 1.09 O
ATOM 9 C3' A A 225 -41.087 187.717 164.472 1.00 1.09 C
ATOM 10 O3' A A 225 -42.134 188.271 163.709 1.00 1.09 O
ATOM 11 C2' A A 225 -39.698 187.971 163.892 1.00 1.09 C
ATOM 12 O2' A A 225 -39.513 189.237 163.305 1.00 1.09 O
ATOM 13 C1' A A 225 -38.824 187.959 165.141 1.00 1.09 C
ATOM 14 N9 A A 225 -37.995 186.768 165.255 1.00 9.39 N
ATOM 15 C8 A A 225 -38.167 185.650 166.015 1.00 9.39 C
ATOM 16 N7 A A 225 -37.206 184.774 165.883 1.00 9.39 N
ATOM 17 C5 A A 225 -36.347 185.361 164.979 1.00 9.39 C
ATOM 18 C6 A A 225 -35.135 184.948 164.446 1.00 9.39 C
ATOM 19 N6 A A 225 -34.538 183.805 164.786 1.00 9.39 N
ATOM 20 N1 A A 225 -34.533 185.760 163.547 1.00 9.39 N
ATOM 21 C2 A A 225 -35.127 186.920 163.237 1.00 9.39 C
ATOM 22 N3 A A 225 -36.263 187.428 163.699 1.00 9.39 N
ATOM 23 C4 A A 225 -36.828 186.582 164.573 1.00 9.39 C
ATOM 24 P G A 226 -43.047 187.298 162.817 1.00 15.41 P
ATOM 25 OP1 G A 226 -44.095 188.146 162.203 1.00 27.26 O
ATOM 26 OP2 G A 226 -43.440 186.124 163.629 1.00 27.26 O
ATOM 27 O5' G A 226 -42.029 186.857 161.673 1.00 12.56 O
TER
ATOM 1 O3' U B 398 -27.463 184.916 160.916 1.00 20.09 O
ATOM 2 P U B 399 -27.937 183.940 162.097 1.00 32.97 P
ATOM 3 OP1 U B 399 -27.911 184.729 163.357 1.00 62.94 O
ATOM 4 OP2 U B 399 -27.148 182.682 161.998 1.00 62.94 O
ATOM 5 O5' U B 399 -29.462 183.594 161.811 1.00 20.99 O
ATOM 6 C5' U B 399 -30.110 182.608 162.642 1.00 20.99 C
ATOM 7 C4' U B 399 -31.457 182.227 162.089 1.00 20.99 C
ATOM 8 O4' U B 399 -32.444 183.217 162.450 1.00 20.99 O
ATOM 9 C3' U B 399 -31.546 182.085 160.583 1.00 20.99 C
ATOM 10 O3' U B 399 -31.121 180.791 160.183 1.00 20.99 O
ATOM 11 C2' U B 399 -33.028 182.307 160.327 1.00 20.99 C
ATOM 12 O2' U B 399 -33.790 181.136 160.522 1.00 20.99 O
ATOM 13 C1' U B 399 -33.389 183.326 161.414 1.00 20.99 C
ATOM 14 N1 U B 399 -33.359 184.709 160.935 1.00 29.13 N
ATOM 15 C2 U B 399 -34.511 185.213 160.391 1.00 29.13 C
ATOM 16 O2 U B 399 -35.530 184.569 160.312 1.00 29.13 O
ATOM 17 N3 U B 399 -34.426 186.503 159.941 1.00 29.13 N
ATOM 18 C4 U B 399 -33.321 187.318 159.983 1.00 29.13 C
ATOM 19 O4 U B 399 -33.397 188.468 159.541 1.00 29.13 O
ATOM 20 C5 U B 399 -32.162 186.715 160.570 1.00 29.13 C
ATOM 21 C6 U B 399 -32.223 185.463 161.016 1.00 29.13 C
ATOM 22 P C B 400 -30.327 180.607 158.803 1.00 36.07 P
ATOM 23 OP1 C B 400 -30.013 179.163 158.684 1.00 25.33 O
ATOM 24 OP2 C B 400 -29.233 181.602 158.755 1.00 25.33 O
ATOM 25 O5' C B 400 -31.422 180.963 157.709 1.00 11.37 O
TER
ATOM 2 P A A 225 -43.071 185.855 167.985 1.00 20.24 P
ATOM 3 OP1 A A 225 -44.479 186.293 167.810 1.00 27.11 O
ATOM 4 OP2 A A 225 -42.743 184.406 167.974 1.00 27.11 O
ATOM 5 O5' A A 225 -42.158 186.550 166.884 1.00 1.09 O
ATOM 6 C5' A A 225 -42.020 187.963 166.858 1.00 1.09 C
ATOM 7 C4' A A 225 -41.002 188.382 165.826 1.00 1.09 C
ATOM 8 O4' A A 225 -39.664 188.061 166.269 1.00 1.09 O
ATOM 9 C3' A A 225 -41.087 187.717 164.472 1.00 1.09 C
ATOM 10 O3' A A 225 -42.134 188.271 163.709 1.00 1.09 O
ATOM 11 C2' A A 225 -39.698 187.971 163.892 1.00 1.09 C
ATOM 12 O2' A A 225 -39.513 189.237 163.305 1.00 1.09 O
ATOM 13 C1' A A 225 -38.824 187.959 165.141 1.00 1.09 C
ATOM 14 N9 A A 225 -37.995 186.768 165.255 1.00 9.39 N
ATOM 15 C8 A A 225 -38.167 185.650 166.015 1.00 9.39 C
ATOM 16 N7 A A 225 -37.206 184.774 165.883 1.00 9.39 N
ATOM 17 C5 A A 225 -36.347 185.361 164.979 1.00 9.39 C
ATOM 18 C6 A A 225 -35.135 184.948 164.446 1.00 9.39 C
ATOM 19 N6 A A 225 -34.538 183.805 164.786 1.00 9.39 N
ATOM 20 N1 A A 225 -34.533 185.760 163.547 1.00 9.39 N
ATOM 21 C2 A A 225 -35.127 186.920 163.237 1.00 9.39 C
ATOM 22 N3 A A 225 -36.263 187.428 163.699 1.00 9.39 N
ATOM 23 C4 A A 225 -36.828 186.582 164.573 1.00 9.39 C
ATOM 24 P G A 226 -43.047 187.298 162.817 1.00 15.41 P
ATOM 25 OP1 G A 226 -44.095 188.146 162.203 1.00 27.26 O
ATOM 26 OP2 G A 226 -43.440 186.124 163.629 1.00 27.26 O
ATOM 27 O5' G A 226 -42.029 186.857 161.673 1.00 12.56 O
TER
ATOM 1 O3' U B 398 -27.463 184.916 160.916 1.00 20.09 O
ATOM 2 P U B 399 -27.937 183.940 162.097 1.00 32.97 P
ATOM 3 OP1 U B 399 -27.911 184.729 163.357 1.00 62.94 O
ATOM 4 OP2 U B 399 -27.148 182.682 161.998 1.00 62.94 O
ATOM 5 O5' U B 399 -29.462 183.594 161.811 1.00 20.99 O
ATOM 6 C5' U B 399 -30.110 182.608 162.642 1.00 20.99 C
ATOM 7 C4' U B 399 -31.457 182.227 162.089 1.00 20.99 C
ATOM 8 O4' U B 399 -32.444 183.217 162.450 1.00 20.99 O
ATOM 9 C3' U B 399 -31.546 182.085 160.583 1.00 20.99 C
ATOM 10 O3' U B 399 -31.121 180.791 160.183 1.00 20.99 O
ATOM 11 C2' U B 399 -33.028 182.307 160.327 1.00 20.99 C
ATOM 12 O2' U B 399 -33.790 181.136 160.522 1.00 20.99 O
ATOM 13 C1' U B 399 -33.389 183.326 161.414 1.00 20.99 C
ATOM 14 N1 U B 399 -33.359 184.709 160.935 1.00 29.13 N
ATOM 15 C2 U B 399 -34.511 185.213 160.391 1.00 29.13 C
ATOM 16 O2 U B 399 -35.530 184.569 160.312 1.00 29.13 O
ATOM 17 N3 U B 399 -34.426 186.503 159.941 1.00 29.13 N
ATOM 18 C4 U B 399 -33.321 187.318 159.983 1.00 29.13 C
ATOM 19 O4 U B 399 -33.397 188.468 159.541 1.00 29.13 O
ATOM 20 C5 U B 399 -32.162 186.715 160.570 1.00 29.13 C
ATOM 21 C6 U B 399 -32.223 185.463 161.016 1.00 29.13 C
ATOM 22 P C B 400 -30.327 180.607 158.803 1.00 36.07 P
ATOM 23 OP1 C B 400 -30.013 179.163 158.684 1.00 25.33 O
ATOM 24 OP2 C B 400 -29.233 181.602 158.755 1.00 25.33 O
ATOM 25 O5' C B 400 -31.422 180.963 157.709 1.00 11.37 O
TER
Atoms:
OP1: (-44.479,186.293,167.810)
OP2: (-42.743,184.406,167.974)
C3': (-41.087,187.717,164.472)
C1': (-38.824,187.959,165.141)
C5': (-42.020,187.963,166.858)
O4': (-39.664,188.061,166.269)
C8: (-38.167,185.650,166.015)
O2': (-39.513,189.237,163.305)
C6: (-35.135,184.948,164.446)
C5: (-36.347,185.361,164.979)
C4: (-36.828,186.582,164.573)
P: (-43.071,185.855,167.985)
C4': (-41.002,188.382,165.826)
C2': (-39.698,187.971,163.892)
C2: (-35.127,186.920,163.237)
N1: (-34.533,185.760,163.547)
N3: (-36.263,187.428,163.699)
N6: (-34.538,183.805,164.786)
N7: (-37.206,184.774,165.883)
N9: (-37.995,186.768,165.255)
O5': (-42.158,186.550,166.884)
O3': (-42.134,188.271,163.709)
OP2: (-42.743,184.406,167.974)
C3': (-41.087,187.717,164.472)
C1': (-38.824,187.959,165.141)
C5': (-42.020,187.963,166.858)
O4': (-39.664,188.061,166.269)
C8: (-38.167,185.650,166.015)
O2': (-39.513,189.237,163.305)
C6: (-35.135,184.948,164.446)
C5: (-36.347,185.361,164.979)
C4: (-36.828,186.582,164.573)
P: (-43.071,185.855,167.985)
C4': (-41.002,188.382,165.826)
C2': (-39.698,187.971,163.892)
C2: (-35.127,186.920,163.237)
N1: (-34.533,185.760,163.547)
N3: (-36.263,187.428,163.699)
N6: (-34.538,183.805,164.786)
N7: (-37.206,184.774,165.883)
N9: (-37.995,186.768,165.255)
O5': (-42.158,186.550,166.884)
O3': (-42.134,188.271,163.709)
C4: (-33.321,187.318,159.983)
N3: (-34.426,186.503,159.941)
OP1: (-27.911,184.729,163.357)
OP2: (-27.148,182.682,161.998)
C2: (-34.511,185.213,160.391)
C1': (-33.389,183.326,161.414)
C3': (-31.546,182.085,160.583)
O5': (-29.462,183.594,161.811)
O4': (-32.444,183.217,162.450)
C5': (-30.110,182.608,162.642)
P: (-27.937,183.940,162.097)
C4': (-31.457,182.227,162.089)
C2': (-33.028,182.307,160.327)
O2': (-33.790,181.136,160.522)
N1: (-33.359,184.709,160.935)
O4: (-33.397,188.468,159.541)
O2: (-35.530,184.569,160.312)
C6: (-32.223,185.463,161.016)
C5: (-32.162,186.715,160.570)
O3': (-31.121,180.791,160.183)
N3: (-34.426,186.503,159.941)
OP1: (-27.911,184.729,163.357)
OP2: (-27.148,182.682,161.998)
C2: (-34.511,185.213,160.391)
C1': (-33.389,183.326,161.414)
C3': (-31.546,182.085,160.583)
O5': (-29.462,183.594,161.811)
O4': (-32.444,183.217,162.450)
C5': (-30.110,182.608,162.642)
P: (-27.937,183.940,162.097)
C4': (-31.457,182.227,162.089)
C2': (-33.028,182.307,160.327)
O2': (-33.790,181.136,160.522)
N1: (-33.359,184.709,160.935)
O4: (-33.397,188.468,159.541)
O2: (-35.530,184.569,160.312)
C6: (-32.223,185.463,161.016)
C5: (-32.162,186.715,160.570)
O3': (-31.121,180.791,160.183)
Image (generated by PyMOL):