Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2234:A2481
Extra
PDB:
ATOM 1 O3' U A2233 -54.328 133.412 161.977 1.00 59.61 O
ATOM 2 P G A2234 -55.748 132.964 162.592 1.00 62.66 P
ATOM 3 OP1 G A2234 -56.388 132.088 161.588 1.00 59.29 O
ATOM 4 OP2 G A2234 -56.479 134.161 163.080 1.00 68.91 O
ATOM 5 O5' G A2234 -55.355 132.084 163.872 1.00 49.58 O
ATOM 6 C5' G A2234 -54.794 130.813 163.657 1.00 54.93 C
ATOM 7 C4' G A2234 -53.806 130.517 164.762 1.00 58.05 C
ATOM 8 O4' G A2234 -54.501 130.379 166.032 1.00 57.81 O
ATOM 9 C3' G A2234 -52.977 129.254 164.543 1.00 63.42 C
ATOM 10 O3' G A2234 -51.588 129.529 164.871 1.00 65.80 O
ATOM 11 C2' G A2234 -53.675 128.231 165.450 1.00 58.80 C
ATOM 12 O2' G A2234 -52.780 127.267 165.974 1.00 52.41 O
ATOM 13 C1' G A2234 -54.282 129.088 166.569 1.00 66.35 C
ATOM 14 N9 G A2234 -55.569 128.636 167.102 1.00 75.02 N
ATOM 15 C8 G A2234 -55.822 127.724 168.102 1.00 73.96 C
ATOM 16 N7 G A2234 -57.099 127.551 168.353 1.00 61.60 N
ATOM 17 C5 G A2234 -57.739 128.403 167.463 1.00 57.91 C
ATOM 18 C6 G A2234 -59.117 128.658 167.256 1.00 62.85 C
ATOM 19 O6 G A2234 -60.090 128.162 167.835 1.00 77.53 O
ATOM 20 N1 G A2234 -59.331 129.599 166.251 1.00 67.37 N
ATOM 21 C2 G A2234 -58.325 130.219 165.542 1.00 79.48 C
ATOM 22 N2 G A2234 -58.702 131.107 164.610 1.00 90.59 N
ATOM 23 N3 G A2234 -57.030 129.993 165.729 1.00 84.08 N
ATOM 24 C4 G A2234 -56.809 129.075 166.698 1.00 73.68 C
ATOM 25 P G A2235 -50.358 128.792 164.147 1.00 53.83 P
ATOM 26 OP1 G A2235 -50.762 128.342 162.793 1.00 55.87 O
ATOM 27 OP2 G A2235 -49.816 127.865 165.173 1.00 40.72 O
ATOM 28 O5' G A2235 -49.289 129.948 163.845 1.00 57.51 O
TER
ATOM 1 O3' C B2480 -53.605 126.147 170.654 1.00 30.95 O
ATOM 2 P A B2481 -52.632 127.405 170.536 1.00 52.07 P
ATOM 3 OP1 A B2481 -53.306 128.607 171.095 1.00 49.36 O
ATOM 4 OP2 A B2481 -52.104 127.405 169.147 1.00 59.01 O
ATOM 5 O5' A B2481 -51.424 127.014 171.502 1.00 48.24 O
ATOM 6 C5' A B2481 -51.614 126.961 172.897 1.00 49.14 C
ATOM 7 C4' A B2481 -50.322 126.489 173.521 1.00 46.08 C
ATOM 8 O4' A B2481 -49.843 125.378 172.731 1.00 49.50 O
ATOM 9 C3' A B2481 -49.175 127.492 173.505 1.00 49.96 C
ATOM 10 O3' A B2481 -48.277 127.144 174.511 1.00 53.20 O
ATOM 11 C2' A B2481 -48.486 127.213 172.182 1.00 51.27 C
ATOM 12 O2' A B2481 -47.124 127.597 172.217 1.00 66.58 O
ATOM 13 C1' A B2481 -48.591 125.697 172.167 1.00 49.74 C
ATOM 14 N9 A B2481 -48.566 125.139 170.827 1.00 48.93 N
ATOM 15 C8 A B2481 -49.221 125.607 169.719 1.00 55.36 C
ATOM 16 N7 A B2481 -49.003 124.886 168.642 1.00 59.50 N
ATOM 17 C5 A B2481 -48.147 123.882 169.079 1.00 54.00 C
ATOM 18 C6 A B2481 -47.540 122.796 168.422 1.00 46.45 C
ATOM 19 N6 A B2481 -47.723 122.545 167.126 1.00 61.91 N
ATOM 20 N1 A B2481 -46.745 121.981 169.148 1.00 50.26 N
ATOM 21 C2 A B2481 -46.567 122.243 170.448 1.00 59.08 C
ATOM 22 N3 A B2481 -47.084 123.233 171.178 1.00 63.97 N
ATOM 23 C4 A B2481 -47.870 124.023 170.426 1.00 56.33 C
ATOM 24 P C B2482 -48.065 128.110 175.763 1.00 39.08 P
ATOM 25 OP1 C B2482 -48.718 129.416 175.516 1.00 30.84 O
ATOM 26 OP2 C B2482 -46.612 128.055 176.105 1.00 40.57 O
ATOM 27 O5' C B2482 -48.953 127.318 176.834 1.00 25.27 O
TER
ATOM 2 P G A2234 -55.748 132.964 162.592 1.00 62.66 P
ATOM 3 OP1 G A2234 -56.388 132.088 161.588 1.00 59.29 O
ATOM 4 OP2 G A2234 -56.479 134.161 163.080 1.00 68.91 O
ATOM 5 O5' G A2234 -55.355 132.084 163.872 1.00 49.58 O
ATOM 6 C5' G A2234 -54.794 130.813 163.657 1.00 54.93 C
ATOM 7 C4' G A2234 -53.806 130.517 164.762 1.00 58.05 C
ATOM 8 O4' G A2234 -54.501 130.379 166.032 1.00 57.81 O
ATOM 9 C3' G A2234 -52.977 129.254 164.543 1.00 63.42 C
ATOM 10 O3' G A2234 -51.588 129.529 164.871 1.00 65.80 O
ATOM 11 C2' G A2234 -53.675 128.231 165.450 1.00 58.80 C
ATOM 12 O2' G A2234 -52.780 127.267 165.974 1.00 52.41 O
ATOM 13 C1' G A2234 -54.282 129.088 166.569 1.00 66.35 C
ATOM 14 N9 G A2234 -55.569 128.636 167.102 1.00 75.02 N
ATOM 15 C8 G A2234 -55.822 127.724 168.102 1.00 73.96 C
ATOM 16 N7 G A2234 -57.099 127.551 168.353 1.00 61.60 N
ATOM 17 C5 G A2234 -57.739 128.403 167.463 1.00 57.91 C
ATOM 18 C6 G A2234 -59.117 128.658 167.256 1.00 62.85 C
ATOM 19 O6 G A2234 -60.090 128.162 167.835 1.00 77.53 O
ATOM 20 N1 G A2234 -59.331 129.599 166.251 1.00 67.37 N
ATOM 21 C2 G A2234 -58.325 130.219 165.542 1.00 79.48 C
ATOM 22 N2 G A2234 -58.702 131.107 164.610 1.00 90.59 N
ATOM 23 N3 G A2234 -57.030 129.993 165.729 1.00 84.08 N
ATOM 24 C4 G A2234 -56.809 129.075 166.698 1.00 73.68 C
ATOM 25 P G A2235 -50.358 128.792 164.147 1.00 53.83 P
ATOM 26 OP1 G A2235 -50.762 128.342 162.793 1.00 55.87 O
ATOM 27 OP2 G A2235 -49.816 127.865 165.173 1.00 40.72 O
ATOM 28 O5' G A2235 -49.289 129.948 163.845 1.00 57.51 O
TER
ATOM 1 O3' C B2480 -53.605 126.147 170.654 1.00 30.95 O
ATOM 2 P A B2481 -52.632 127.405 170.536 1.00 52.07 P
ATOM 3 OP1 A B2481 -53.306 128.607 171.095 1.00 49.36 O
ATOM 4 OP2 A B2481 -52.104 127.405 169.147 1.00 59.01 O
ATOM 5 O5' A B2481 -51.424 127.014 171.502 1.00 48.24 O
ATOM 6 C5' A B2481 -51.614 126.961 172.897 1.00 49.14 C
ATOM 7 C4' A B2481 -50.322 126.489 173.521 1.00 46.08 C
ATOM 8 O4' A B2481 -49.843 125.378 172.731 1.00 49.50 O
ATOM 9 C3' A B2481 -49.175 127.492 173.505 1.00 49.96 C
ATOM 10 O3' A B2481 -48.277 127.144 174.511 1.00 53.20 O
ATOM 11 C2' A B2481 -48.486 127.213 172.182 1.00 51.27 C
ATOM 12 O2' A B2481 -47.124 127.597 172.217 1.00 66.58 O
ATOM 13 C1' A B2481 -48.591 125.697 172.167 1.00 49.74 C
ATOM 14 N9 A B2481 -48.566 125.139 170.827 1.00 48.93 N
ATOM 15 C8 A B2481 -49.221 125.607 169.719 1.00 55.36 C
ATOM 16 N7 A B2481 -49.003 124.886 168.642 1.00 59.50 N
ATOM 17 C5 A B2481 -48.147 123.882 169.079 1.00 54.00 C
ATOM 18 C6 A B2481 -47.540 122.796 168.422 1.00 46.45 C
ATOM 19 N6 A B2481 -47.723 122.545 167.126 1.00 61.91 N
ATOM 20 N1 A B2481 -46.745 121.981 169.148 1.00 50.26 N
ATOM 21 C2 A B2481 -46.567 122.243 170.448 1.00 59.08 C
ATOM 22 N3 A B2481 -47.084 123.233 171.178 1.00 63.97 N
ATOM 23 C4 A B2481 -47.870 124.023 170.426 1.00 56.33 C
ATOM 24 P C B2482 -48.065 128.110 175.763 1.00 39.08 P
ATOM 25 OP1 C B2482 -48.718 129.416 175.516 1.00 30.84 O
ATOM 26 OP2 C B2482 -46.612 128.055 176.105 1.00 40.57 O
ATOM 27 O5' C B2482 -48.953 127.318 176.834 1.00 25.27 O
TER
Atoms:
OP1: (-56.388,132.088,161.588)
OP2: (-56.479,134.161,163.080)
C3': (-52.977,129.254,164.543)
C1': (-54.282,129.088,166.569)
C5': (-54.794,130.813,163.657)
O6: (-60.090,128.162,167.835)
O4': (-54.501,130.379,166.032)
C8: (-55.822,127.724,168.102)
C2: (-58.325,130.219,165.542)
C6: (-59.117,128.658,167.256)
C5: (-57.739,128.403,167.463)
C4: (-56.809,129.075,166.698)
P: (-55.748,132.964,162.592)
C4': (-53.806,130.517,164.762)
C2': (-53.675,128.231,165.450)
O2': (-52.780,127.267,165.974)
N1: (-59.331,129.599,166.251)
N2: (-58.702,131.107,164.610)
N3: (-57.030,129.993,165.729)
N7: (-57.099,127.551,168.353)
N9: (-55.569,128.636,167.102)
O5': (-55.355,132.084,163.872)
O3': (-51.588,129.529,164.871)
OP2: (-56.479,134.161,163.080)
C3': (-52.977,129.254,164.543)
C1': (-54.282,129.088,166.569)
C5': (-54.794,130.813,163.657)
O6: (-60.090,128.162,167.835)
O4': (-54.501,130.379,166.032)
C8: (-55.822,127.724,168.102)
C2: (-58.325,130.219,165.542)
C6: (-59.117,128.658,167.256)
C5: (-57.739,128.403,167.463)
C4: (-56.809,129.075,166.698)
P: (-55.748,132.964,162.592)
C4': (-53.806,130.517,164.762)
C2': (-53.675,128.231,165.450)
O2': (-52.780,127.267,165.974)
N1: (-59.331,129.599,166.251)
N2: (-58.702,131.107,164.610)
N3: (-57.030,129.993,165.729)
N7: (-57.099,127.551,168.353)
N9: (-55.569,128.636,167.102)
O5': (-55.355,132.084,163.872)
O3': (-51.588,129.529,164.871)
OP1: (-53.306,128.607,171.095)
OP2: (-52.104,127.405,169.147)
C3': (-49.175,127.492,173.505)
C1': (-48.591,125.697,172.167)
C5': (-51.614,126.961,172.897)
O4': (-49.843,125.378,172.731)
C8: (-49.221,125.607,169.719)
O2': (-47.124,127.597,172.217)
C6: (-47.540,122.796,168.422)
C5: (-48.147,123.882,169.079)
C4: (-47.870,124.023,170.426)
P: (-52.632,127.405,170.536)
C4': (-50.322,126.489,173.521)
C2': (-48.486,127.213,172.182)
C2: (-46.567,122.243,170.448)
N1: (-46.745,121.981,169.148)
N3: (-47.084,123.233,171.178)
N6: (-47.723,122.545,167.126)
N7: (-49.003,124.886,168.642)
N9: (-48.566,125.139,170.827)
O5': (-51.424,127.014,171.502)
O3': (-48.277,127.144,174.511)
OP2: (-52.104,127.405,169.147)
C3': (-49.175,127.492,173.505)
C1': (-48.591,125.697,172.167)
C5': (-51.614,126.961,172.897)
O4': (-49.843,125.378,172.731)
C8: (-49.221,125.607,169.719)
O2': (-47.124,127.597,172.217)
C6: (-47.540,122.796,168.422)
C5: (-48.147,123.882,169.079)
C4: (-47.870,124.023,170.426)
P: (-52.632,127.405,170.536)
C4': (-50.322,126.489,173.521)
C2': (-48.486,127.213,172.182)
C2: (-46.567,122.243,170.448)
N1: (-46.745,121.981,169.148)
N3: (-47.084,123.233,171.178)
N6: (-47.723,122.545,167.126)
N7: (-49.003,124.886,168.642)
N9: (-48.566,125.139,170.827)
O5': (-51.424,127.014,171.502)
O3': (-48.277,127.144,174.511)
Image (generated by PyMOL):