ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A2418:A2396

Extra

PDB:
ATOM 1 O3' C A2417 -50.791 81.966 182.757 1.00 34.30 O
ATOM 2 P A A2418 -49.988 83.353 182.811 1.00 61.03 P
ATOM 3 OP1 A A2418 -49.944 83.786 184.230 1.00 90.56 O
ATOM 4 OP2 A A2418 -50.532 84.277 181.783 1.00 90.48 O
ATOM 5 O5' A A2418 -48.526 82.912 182.360 1.00 8.96 O
ATOM 6 C5' A A2418 -47.768 82.021 183.182 1.00 8.96 C
ATOM 7 C4' A A2418 -46.717 81.322 182.378 1.00 8.96 C
ATOM 8 O4' A A2418 -47.343 80.607 181.283 1.00 8.96 O
ATOM 9 C3' A A2418 -45.675 82.188 181.698 1.00 8.96 C
ATOM 10 O3' A A2418 -44.661 82.611 182.607 1.00 8.96 O
ATOM 11 C2' A A2418 -45.153 81.256 180.600 1.00 8.96 C
ATOM 12 O2' A A2418 -44.155 80.340 181.018 1.00 8.96 O
ATOM 13 C1' A A2418 -46.423 80.498 180.208 1.00 8.96 C
ATOM 14 N9 A A2418 -47.018 81.091 179.015 1.00 22.72 N
ATOM 15 C8 A A2418 -48.119 81.906 178.902 1.00 22.77 C
ATOM 16 N7 A A2418 -48.362 82.293 177.672 1.00 22.82 N
ATOM 17 C5 A A2418 -47.360 81.683 176.926 1.00 22.89 C
ATOM 18 C6 A A2418 -47.065 81.689 175.553 1.00 22.85 C
ATOM 19 N6 A A2418 -47.796 82.336 174.641 1.00 22.76 N
ATOM 20 N1 A A2418 -45.984 80.991 175.141 1.00 22.85 N
ATOM 21 C2 A A2418 -45.267 80.320 176.050 1.00 22.86 C
ATOM 22 N3 A A2418 -45.454 80.225 177.362 1.00 22.89 N
ATOM 23 C4 A A2418 -46.528 80.940 177.740 1.00 22.86 C
ATOM 24 P A A2419 -44.448 84.181 182.894 1.00 35.38 P
ATOM 25 OP1 A A2419 -43.742 84.259 184.197 1.00 64.59 O
ATOM 26 OP2 A A2419 -45.747 84.889 182.718 1.00 64.45 O
ATOM 27 O5' A A2419 -43.467 84.672 181.739 1.00 61.16 O
TER

ATOM 1 O3' A B2395 -49.159 88.952 172.745 1.00 47.49 O
ATOM 2 P U B2396 -48.900 87.381 172.915 1.00 22.30 P
ATOM 3 OP1 U B2396 -49.456 86.717 171.702 1.00 57.62 O
ATOM 4 OP2 U B2396 -49.372 86.977 174.270 1.00 57.43 O
ATOM 5 O5' U B2396 -47.319 87.235 172.885 1.00 26.02 O
ATOM 6 C5' U B2396 -46.559 87.706 171.759 1.00 26.02 C
ATOM 7 C4' U B2396 -45.698 86.590 171.230 1.00 26.02 C
ATOM 8 O4' U B2396 -44.791 86.150 172.275 1.00 26.02 O
ATOM 9 C3' U B2396 -46.509 85.375 170.824 1.00 26.02 C
ATOM 10 O3' U B2396 -45.785 84.697 169.813 1.00 26.02 O
ATOM 11 C2' U B2396 -46.454 84.522 172.079 1.00 26.02 C
ATOM 12 O2' U B2396 -46.645 83.152 171.816 1.00 26.02 O
ATOM 13 C1' U B2396 -45.032 84.802 172.563 1.00 26.02 C
ATOM 14 N1 U B2396 -44.817 84.590 173.997 1.00 41.66 N
ATOM 15 C2 U B2396 -43.755 83.779 174.372 1.00 41.78 C
ATOM 16 O2 U B2396 -42.999 83.246 173.571 1.00 41.89 O
ATOM 17 N3 U B2396 -43.611 83.613 175.722 1.00 41.81 N
ATOM 18 C4 U B2396 -44.402 84.160 176.712 1.00 41.74 C
ATOM 19 O4 U B2396 -44.149 83.913 177.891 1.00 41.77 O
ATOM 20 C5 U B2396 -45.473 84.986 176.241 1.00 41.67 C
ATOM 21 C6 U B2396 -45.638 85.169 174.934 1.00 41.55 C
ATOM 22 P C B2397 -46.034 85.035 168.272 1.00 24.74 P
ATOM 23 OP1 C B2397 -46.511 86.438 168.179 1.00 43.15 O
ATOM 24 OP2 C B2397 -46.837 83.949 167.649 1.00 42.78 O
ATOM 25 O5' C B2397 -44.564 84.954 167.682 1.00 34.45 O
TER

Atoms:
OP1: (-49.944,83.786,184.230)
OP2: (-50.532,84.277,181.783)
C3': (-45.675,82.188,181.698)
C1': (-46.423,80.498,180.208)
C5': (-47.768,82.021,183.182)
O4': (-47.343,80.607,181.283)
C8: (-48.119,81.906,178.902)
O2': (-44.155,80.340,181.018)
C6: (-47.065,81.689,175.553)
C5: (-47.360,81.683,176.926)
C4: (-46.528,80.940,177.740)
P: (-49.988,83.353,182.811)
C4': (-46.717,81.322,182.378)
C2': (-45.153,81.256,180.600)
C2: (-45.267,80.320,176.050)
N1: (-45.984,80.991,175.141)
N3: (-45.454,80.225,177.362)
N6: (-47.796,82.336,174.641)
N7: (-48.362,82.293,177.672)
N9: (-47.018,81.091,179.015)
O5': (-48.526,82.912,182.360)
O3': (-44.661,82.611,182.607)
C4: (-44.402,84.160,176.712)
N3: (-43.611,83.613,175.722)
OP1: (-49.456,86.717,171.702)
OP2: (-49.372,86.977,174.270)
C2: (-43.755,83.779,174.372)
C1': (-45.032,84.802,172.563)
C3': (-46.509,85.375,170.824)
O5': (-47.319,87.235,172.885)
O4': (-44.791,86.150,172.275)
C5': (-46.559,87.706,171.759)
P: (-48.900,87.381,172.915)
C4': (-45.698,86.590,171.230)
C2': (-46.454,84.522,172.079)
O2': (-46.645,83.152,171.816)
N1: (-44.817,84.590,173.997)
O4: (-44.149,83.913,177.891)
O2: (-42.999,83.246,173.571)
C6: (-45.638,85.169,174.934)
C5: (-45.473,84.986,176.241)
O3': (-45.785,84.697,169.813)
Image (generated by PyMOL):
PyMOL image
show in jmol