Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2234:A2481
Extra
PDB:
ATOM 1 O3' U A2233 -107.396 -51.112 18.610 1.00 65.70 O
ATOM 2 P G A2234 -108.833 -51.687 18.150 1.00 69.34 P
ATOM 3 OP1 G A2234 -109.467 -50.642 17.312 1.00 61.89 O
ATOM 4 OP2 G A2234 -109.541 -52.209 19.335 1.00 73.54 O
ATOM 5 O5' G A2234 -108.499 -52.952 17.235 1.00 54.22 O
ATOM 6 C5' G A2234 -107.933 -52.694 15.969 1.00 57.01 C
ATOM 7 C4' G A2234 -106.959 -53.790 15.596 1.00 54.86 C
ATOM 8 O4' G A2234 -107.692 -55.026 15.419 1.00 62.19 O
ATOM 9 C3' G A2234 -106.165 -53.538 14.317 1.00 61.41 C
ATOM 10 O3' G A2234 -104.779 -53.877 14.546 1.00 66.59 O
ATOM 11 C2' G A2234 -106.873 -54.405 13.265 1.00 58.96 C
ATOM 12 O2' G A2234 -105.982 -54.922 12.284 1.00 48.36 O
ATOM 13 C1' G A2234 -107.528 -55.521 14.097 1.00 73.47 C
ATOM 14 N9 G A2234 -108.845 -56.004 13.646 1.00 80.02 N
ATOM 15 C8 G A2234 -109.139 -56.945 12.686 1.00 73.25 C
ATOM 16 N7 G A2234 -110.417 -57.156 12.529 1.00 64.69 N
ATOM 17 C5 G A2234 -111.014 -56.306 13.446 1.00 62.04 C
ATOM 18 C6 G A2234 -112.384 -56.084 13.747 1.00 70.87 C
ATOM 19 O6 G A2234 -113.392 -56.610 13.251 1.00 78.47 O
ATOM 20 N1 G A2234 -112.540 -55.126 14.748 1.00 75.87 N
ATOM 21 C2 G A2234 -111.500 -54.474 15.381 1.00 79.67 C
ATOM 22 N2 G A2234 -111.819 -53.581 16.328 1.00 83.03 N
ATOM 23 N3 G A2234 -110.223 -54.679 15.114 1.00 77.91 N
ATOM 24 C4 G A2234 -110.058 -55.600 14.140 1.00 72.85 C
ATOM 25 P G A2235 -103.535 -53.163 13.802 1.00 47.39 P
ATOM 26 OP1 G A2235 -103.949 -51.784 13.436 1.00 53.55 O
ATOM 27 OP2 G A2235 -103.067 -54.141 12.769 1.00 36.36 O
ATOM 28 O5' G A2235 -102.414 -52.957 14.943 1.00 44.42 O
TER
ATOM 1 O3' C B2480 -106.951 -59.462 11.011 1.00 44.14 O
ATOM 2 P A B2481 -105.977 -59.419 12.278 1.00 52.10 P
ATOM 3 OP1 A B2481 -106.640 -59.996 13.468 1.00 46.81 O
ATOM 4 OP2 A B2481 -105.417 -58.052 12.316 1.00 64.19 O
ATOM 5 O5' A B2481 -104.797 -60.410 11.858 1.00 56.89 O
ATOM 6 C5' A B2481 -105.019 -61.799 11.709 1.00 57.19 C
ATOM 7 C4' A B2481 -103.770 -62.456 11.159 1.00 48.59 C
ATOM 8 O4' A B2481 -103.284 -61.663 10.059 1.00 53.77 O
ATOM 9 C3' A B2481 -102.604 -62.510 12.125 1.00 55.04 C
ATOM 10 O3' A B2481 -101.732 -63.522 11.699 1.00 62.03 O
ATOM 11 C2' A B2481 -101.913 -61.181 11.903 1.00 54.64 C
ATOM 12 O2' A B2481 -100.546 -61.262 12.253 1.00 73.32 O
ATOM 13 C1' A B2481 -102.029 -61.107 10.394 1.00 54.37 C
ATOM 14 N9 A B2481 -101.975 -59.746 9.888 1.00 52.76 N
ATOM 15 C8 A B2481 -102.597 -58.639 10.403 1.00 60.61 C
ATOM 16 N7 A B2481 -102.370 -57.543 9.715 1.00 62.34 N
ATOM 17 C5 A B2481 -101.539 -57.967 8.681 1.00 57.56 C
ATOM 18 C6 A B2481 -100.928 -57.294 7.601 1.00 52.38 C
ATOM 19 N6 A B2481 -101.086 -55.989 7.399 1.00 74.43 N
ATOM 20 N1 A B2481 -100.155 -57.993 6.736 1.00 54.03 N
ATOM 21 C2 A B2481 -100.009 -59.303 6.956 1.00 67.06 C
ATOM 22 N3 A B2481 -100.529 -60.054 7.936 1.00 75.82 N
ATOM 23 C4 A B2481 -101.289 -59.321 8.773 1.00 61.96 C
ATOM 24 P C B2482 -101.459 -64.792 12.625 1.00 50.49 P
ATOM 25 OP1 C B2482 -102.112 -64.635 13.958 1.00 31.52 O
ATOM 26 OP2 C B2482 -99.996 -65.038 12.542 1.00 39.06 O
ATOM 27 O5' C B2482 -102.329 -65.843 11.775 1.00 34.83 O
TER
ATOM 2 P G A2234 -108.833 -51.687 18.150 1.00 69.34 P
ATOM 3 OP1 G A2234 -109.467 -50.642 17.312 1.00 61.89 O
ATOM 4 OP2 G A2234 -109.541 -52.209 19.335 1.00 73.54 O
ATOM 5 O5' G A2234 -108.499 -52.952 17.235 1.00 54.22 O
ATOM 6 C5' G A2234 -107.933 -52.694 15.969 1.00 57.01 C
ATOM 7 C4' G A2234 -106.959 -53.790 15.596 1.00 54.86 C
ATOM 8 O4' G A2234 -107.692 -55.026 15.419 1.00 62.19 O
ATOM 9 C3' G A2234 -106.165 -53.538 14.317 1.00 61.41 C
ATOM 10 O3' G A2234 -104.779 -53.877 14.546 1.00 66.59 O
ATOM 11 C2' G A2234 -106.873 -54.405 13.265 1.00 58.96 C
ATOM 12 O2' G A2234 -105.982 -54.922 12.284 1.00 48.36 O
ATOM 13 C1' G A2234 -107.528 -55.521 14.097 1.00 73.47 C
ATOM 14 N9 G A2234 -108.845 -56.004 13.646 1.00 80.02 N
ATOM 15 C8 G A2234 -109.139 -56.945 12.686 1.00 73.25 C
ATOM 16 N7 G A2234 -110.417 -57.156 12.529 1.00 64.69 N
ATOM 17 C5 G A2234 -111.014 -56.306 13.446 1.00 62.04 C
ATOM 18 C6 G A2234 -112.384 -56.084 13.747 1.00 70.87 C
ATOM 19 O6 G A2234 -113.392 -56.610 13.251 1.00 78.47 O
ATOM 20 N1 G A2234 -112.540 -55.126 14.748 1.00 75.87 N
ATOM 21 C2 G A2234 -111.500 -54.474 15.381 1.00 79.67 C
ATOM 22 N2 G A2234 -111.819 -53.581 16.328 1.00 83.03 N
ATOM 23 N3 G A2234 -110.223 -54.679 15.114 1.00 77.91 N
ATOM 24 C4 G A2234 -110.058 -55.600 14.140 1.00 72.85 C
ATOM 25 P G A2235 -103.535 -53.163 13.802 1.00 47.39 P
ATOM 26 OP1 G A2235 -103.949 -51.784 13.436 1.00 53.55 O
ATOM 27 OP2 G A2235 -103.067 -54.141 12.769 1.00 36.36 O
ATOM 28 O5' G A2235 -102.414 -52.957 14.943 1.00 44.42 O
TER
ATOM 1 O3' C B2480 -106.951 -59.462 11.011 1.00 44.14 O
ATOM 2 P A B2481 -105.977 -59.419 12.278 1.00 52.10 P
ATOM 3 OP1 A B2481 -106.640 -59.996 13.468 1.00 46.81 O
ATOM 4 OP2 A B2481 -105.417 -58.052 12.316 1.00 64.19 O
ATOM 5 O5' A B2481 -104.797 -60.410 11.858 1.00 56.89 O
ATOM 6 C5' A B2481 -105.019 -61.799 11.709 1.00 57.19 C
ATOM 7 C4' A B2481 -103.770 -62.456 11.159 1.00 48.59 C
ATOM 8 O4' A B2481 -103.284 -61.663 10.059 1.00 53.77 O
ATOM 9 C3' A B2481 -102.604 -62.510 12.125 1.00 55.04 C
ATOM 10 O3' A B2481 -101.732 -63.522 11.699 1.00 62.03 O
ATOM 11 C2' A B2481 -101.913 -61.181 11.903 1.00 54.64 C
ATOM 12 O2' A B2481 -100.546 -61.262 12.253 1.00 73.32 O
ATOM 13 C1' A B2481 -102.029 -61.107 10.394 1.00 54.37 C
ATOM 14 N9 A B2481 -101.975 -59.746 9.888 1.00 52.76 N
ATOM 15 C8 A B2481 -102.597 -58.639 10.403 1.00 60.61 C
ATOM 16 N7 A B2481 -102.370 -57.543 9.715 1.00 62.34 N
ATOM 17 C5 A B2481 -101.539 -57.967 8.681 1.00 57.56 C
ATOM 18 C6 A B2481 -100.928 -57.294 7.601 1.00 52.38 C
ATOM 19 N6 A B2481 -101.086 -55.989 7.399 1.00 74.43 N
ATOM 20 N1 A B2481 -100.155 -57.993 6.736 1.00 54.03 N
ATOM 21 C2 A B2481 -100.009 -59.303 6.956 1.00 67.06 C
ATOM 22 N3 A B2481 -100.529 -60.054 7.936 1.00 75.82 N
ATOM 23 C4 A B2481 -101.289 -59.321 8.773 1.00 61.96 C
ATOM 24 P C B2482 -101.459 -64.792 12.625 1.00 50.49 P
ATOM 25 OP1 C B2482 -102.112 -64.635 13.958 1.00 31.52 O
ATOM 26 OP2 C B2482 -99.996 -65.038 12.542 1.00 39.06 O
ATOM 27 O5' C B2482 -102.329 -65.843 11.775 1.00 34.83 O
TER
Atoms:
OP1: (-109.467,-50.642,17.312)
OP2: (-109.541,-52.209,19.335)
C3': (-106.165,-53.538,14.317)
C1': (-107.528,-55.521,14.097)
C5': (-107.933,-52.694,15.969)
O6: (-113.392,-56.610,13.251)
O4': (-107.692,-55.026,15.419)
C8: (-109.139,-56.945,12.686)
C2: (-111.500,-54.474,15.381)
C6: (-112.384,-56.084,13.747)
C5: (-111.014,-56.306,13.446)
C4: (-110.058,-55.600,14.140)
P: (-108.833,-51.687,18.150)
C4': (-106.959,-53.790,15.596)
C2': (-106.873,-54.405,13.265)
O2': (-105.982,-54.922,12.284)
N1: (-112.540,-55.126,14.748)
N2: (-111.819,-53.581,16.328)
N3: (-110.223,-54.679,15.114)
N7: (-110.417,-57.156,12.529)
N9: (-108.845,-56.004,13.646)
O5': (-108.499,-52.952,17.235)
O3': (-104.779,-53.877,14.546)
OP2: (-109.541,-52.209,19.335)
C3': (-106.165,-53.538,14.317)
C1': (-107.528,-55.521,14.097)
C5': (-107.933,-52.694,15.969)
O6: (-113.392,-56.610,13.251)
O4': (-107.692,-55.026,15.419)
C8: (-109.139,-56.945,12.686)
C2: (-111.500,-54.474,15.381)
C6: (-112.384,-56.084,13.747)
C5: (-111.014,-56.306,13.446)
C4: (-110.058,-55.600,14.140)
P: (-108.833,-51.687,18.150)
C4': (-106.959,-53.790,15.596)
C2': (-106.873,-54.405,13.265)
O2': (-105.982,-54.922,12.284)
N1: (-112.540,-55.126,14.748)
N2: (-111.819,-53.581,16.328)
N3: (-110.223,-54.679,15.114)
N7: (-110.417,-57.156,12.529)
N9: (-108.845,-56.004,13.646)
O5': (-108.499,-52.952,17.235)
O3': (-104.779,-53.877,14.546)
OP1: (-106.640,-59.996,13.468)
OP2: (-105.417,-58.052,12.316)
C3': (-102.604,-62.510,12.125)
C1': (-102.029,-61.107,10.394)
C5': (-105.019,-61.799,11.709)
O4': (-103.284,-61.663,10.059)
C8: (-102.597,-58.639,10.403)
O2': (-100.546,-61.262,12.253)
C6: (-100.928,-57.294,7.601)
C5: (-101.539,-57.967,8.681)
C4: (-101.289,-59.321,8.773)
P: (-105.977,-59.419,12.278)
C4': (-103.770,-62.456,11.159)
C2': (-101.913,-61.181,11.903)
C2: (-100.009,-59.303,6.956)
N1: (-100.155,-57.993,6.736)
N3: (-100.529,-60.054,7.936)
N6: (-101.086,-55.989,7.399)
N7: (-102.370,-57.543,9.715)
N9: (-101.975,-59.746,9.888)
O5': (-104.797,-60.410,11.858)
O3': (-101.732,-63.522,11.699)
OP2: (-105.417,-58.052,12.316)
C3': (-102.604,-62.510,12.125)
C1': (-102.029,-61.107,10.394)
C5': (-105.019,-61.799,11.709)
O4': (-103.284,-61.663,10.059)
C8: (-102.597,-58.639,10.403)
O2': (-100.546,-61.262,12.253)
C6: (-100.928,-57.294,7.601)
C5: (-101.539,-57.967,8.681)
C4: (-101.289,-59.321,8.773)
P: (-105.977,-59.419,12.278)
C4': (-103.770,-62.456,11.159)
C2': (-101.913,-61.181,11.903)
C2: (-100.009,-59.303,6.956)
N1: (-100.155,-57.993,6.736)
N3: (-100.529,-60.054,7.936)
N6: (-101.086,-55.989,7.399)
N7: (-102.370,-57.543,9.715)
N9: (-101.975,-59.746,9.888)
O5': (-104.797,-60.410,11.858)
O3': (-101.732,-63.522,11.699)
Image (generated by PyMOL):