ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A749:A784

Extra

PDB:
ATOM 1 O3' G A 748 -45.673 -16.070 4.546 1.00 40.02 O
ATOM 2 P G A 749 -46.800 -15.516 5.522 1.00 37.72 P
ATOM 3 OP1 G A 749 -47.811 -14.898 4.632 1.00 45.74 O
ATOM 4 OP2 G A 749 -46.188 -14.738 6.629 1.00 42.25 O
ATOM 5 O5' G A 749 -47.382 -16.871 6.149 1.00 42.82 O
ATOM 6 C5' G A 749 -47.686 -17.979 5.291 1.00 42.79 C
ATOM 7 C4' G A 749 -47.735 -19.295 6.049 1.00 31.49 C
ATOM 8 O4' G A 749 -48.262 -19.115 7.391 1.00 29.11 O
ATOM 9 C3' G A 749 -48.650 -20.303 5.383 1.00 29.71 C
ATOM 10 O3' G A 749 -47.897 -21.130 4.511 1.00 28.96 O
ATOM 11 C2' G A 749 -49.244 -21.113 6.539 1.00 32.95 C
ATOM 12 O2' G A 749 -48.576 -22.348 6.754 1.00 38.70 O
ATOM 13 C1' G A 749 -49.078 -20.208 7.757 1.00 29.01 C
ATOM 14 N9 G A 749 -50.339 -19.699 8.280 1.00 26.83 N
ATOM 15 C8 G A 749 -50.615 -19.538 9.608 1.00 30.35 C
ATOM 16 N7 G A 749 -51.797 -19.065 9.842 1.00 30.73 N
ATOM 17 C5 G A 749 -52.357 -18.906 8.583 1.00 30.50 C
ATOM 18 C6 G A 749 -53.649 -18.419 8.226 1.00 35.68 C
ATOM 19 O6 G A 749 -54.571 -18.034 8.962 1.00 32.65 O
ATOM 20 N1 G A 749 -53.837 -18.411 6.850 1.00 35.78 N
ATOM 21 C2 G A 749 -52.875 -18.825 5.948 1.00 37.08 C
ATOM 22 N2 G A 749 -53.231 -18.737 4.653 1.00 36.01 N
ATOM 23 N3 G A 749 -51.657 -19.285 6.276 1.00 33.59 N
ATOM 24 C4 G A 749 -51.467 -19.298 7.610 1.00 26.53 C
ATOM 25 P C A 750 -48.418 -21.307 3.011 1.00 36.67 P
ATOM 26 OP1 C A 750 -49.868 -21.616 3.027 1.00 46.27 O
ATOM 27 OP2 C A 750 -47.482 -22.216 2.311 1.00 37.50 O
ATOM 28 O5' C A 750 -48.245 -19.818 2.450 1.00 36.26 O
TER

ATOM 1 O3' G B 783 -46.657 -21.353 9.823 1.00 29.15 O
ATOM 2 P A B 784 -46.920 -20.478 11.142 1.00 40.04 P
ATOM 3 OP1 A B 784 -47.600 -19.234 10.721 1.00 42.71 O
ATOM 4 OP2 A B 784 -45.649 -20.402 11.923 1.00 32.72 O
ATOM 5 O5' A B 784 -47.987 -21.349 11.961 1.00 34.02 O
ATOM 6 C5' A B 784 -47.546 -22.023 13.117 1.00 37.41 C
ATOM 7 C4' A B 784 -48.622 -22.959 13.603 1.00 31.29 C
ATOM 8 O4' A B 784 -49.915 -22.382 13.318 1.00 25.02 O
ATOM 9 C3' A B 784 -48.619 -24.345 12.951 1.00 35.12 C
ATOM 10 O3' A B 784 -48.346 -25.340 13.914 1.00 44.91 O
ATOM 11 C2' A B 784 -50.050 -24.557 12.485 1.00 37.12 C
ATOM 12 O2' A B 784 -50.538 -25.842 12.832 1.00 30.24 O
ATOM 13 C1' A B 784 -50.805 -23.479 13.262 1.00 39.34 C
ATOM 14 N9 A B 784 -52.033 -23.095 12.576 1.00 38.11 N
ATOM 15 C8 A B 784 -52.136 -22.727 11.254 1.00 29.38 C
ATOM 16 N7 A B 784 -53.356 -22.443 10.871 1.00 21.94 N
ATOM 17 C5 A B 784 -54.104 -22.640 12.031 1.00 24.78 C
ATOM 18 C6 A B 784 -55.482 -22.499 12.289 1.00 26.47 C
ATOM 19 N6 A B 784 -56.369 -22.115 11.350 1.00 25.07 N
ATOM 20 N1 A B 784 -55.892 -22.784 13.546 1.00 25.13 N
ATOM 21 C2 A B 784 -55.005 -23.176 14.465 1.00 28.27 C
ATOM 22 N3 A B 784 -53.696 -23.341 14.340 1.00 24.36 N
ATOM 23 C4 A B 784 -53.310 -23.053 13.092 1.00 25.88 C
ATOM 24 P G B 785 -46.846 -25.725 14.255 1.00 52.49 P
ATOM 25 OP1 G B 785 -46.923 -26.674 15.388 1.00 43.19 O
ATOM 26 OP2 G B 785 -46.049 -24.473 14.341 1.00 51.00 O
ATOM 27 O5' G B 785 -46.363 -26.499 12.946 1.00 43.71 O
TER

Atoms:
OP1: (-47.811,-14.898,4.632)
OP2: (-46.188,-14.738,6.629)
C3': (-48.650,-20.303,5.383)
C1': (-49.078,-20.208,7.757)
C5': (-47.686,-17.979,5.291)
O6: (-54.571,-18.034,8.962)
O4': (-48.262,-19.115,7.391)
C8: (-50.615,-19.538,9.608)
C2: (-52.875,-18.825,5.948)
C6: (-53.649,-18.419,8.226)
C5: (-52.357,-18.906,8.583)
C4: (-51.467,-19.298,7.610)
P: (-46.800,-15.516,5.522)
C4': (-47.735,-19.295,6.049)
C2': (-49.244,-21.113,6.539)
O2': (-48.576,-22.348,6.754)
N1: (-53.837,-18.411,6.850)
N2: (-53.231,-18.737,4.653)
N3: (-51.657,-19.285,6.276)
N7: (-51.797,-19.065,9.842)
N9: (-50.339,-19.699,8.280)
O5': (-47.382,-16.871,6.149)
O3': (-47.897,-21.130,4.511)
OP1: (-47.600,-19.234,10.721)
OP2: (-45.649,-20.402,11.923)
C3': (-48.619,-24.345,12.951)
C1': (-50.805,-23.479,13.262)
C5': (-47.546,-22.023,13.117)
O4': (-49.915,-22.382,13.318)
C8: (-52.136,-22.727,11.254)
O2': (-50.538,-25.842,12.832)
C6: (-55.482,-22.499,12.289)
C5: (-54.104,-22.640,12.031)
C4: (-53.310,-23.053,13.092)
P: (-46.920,-20.478,11.142)
C4': (-48.622,-22.959,13.603)
C2': (-50.050,-24.557,12.485)
C2: (-55.005,-23.176,14.465)
N1: (-55.892,-22.784,13.546)
N3: (-53.696,-23.341,14.340)
N6: (-56.369,-22.115,11.350)
N7: (-53.356,-22.443,10.871)
N9: (-52.033,-23.095,12.576)
O5': (-47.987,-21.349,11.961)
O3': (-48.346,-25.340,13.914)
Image (generated by PyMOL):
PyMOL image
show in jmol