ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUM:R90:R88

Extra

PDB:
ATOM 1 O3' U A 89 -17.687 -2.813 33.855 1.00 73.35 O
ATOM 2 P G A 90 -18.889 -3.326 32.911 1.00 73.92 P
ATOM 3 OP1 G A 90 -20.044 -3.645 33.781 1.00 73.42 O
ATOM 4 OP2 G A 90 -18.345 -4.377 32.016 1.00 73.25 O
ATOM 5 O5' G A 90 -19.258 -2.038 32.022 1.00 72.98 O
ATOM 6 C5' G A 90 -18.885 -1.944 30.641 1.00 69.03 C
ATOM 7 C4' G A 90 -19.039 -0.526 30.114 1.00 66.10 C
ATOM 8 O4' G A 90 -17.900 -0.204 29.270 1.00 65.48 O
ATOM 9 C3' G A 90 -20.240 -0.297 29.203 1.00 65.24 C
ATOM 10 O3' G A 90 -21.402 0.094 29.918 1.00 65.45 O
ATOM 11 C2' G A 90 -19.730 0.782 28.251 1.00 64.48 C
ATOM 12 O2' G A 90 -19.613 2.062 28.839 1.00 63.48 O
ATOM 13 C1' G A 90 -18.347 0.207 27.983 1.00 64.74 C
ATOM 14 N9 G A 90 -18.327 -0.939 27.050 1.00 63.18 N
ATOM 15 C8 G A 90 -17.689 -2.143 27.253 1.00 61.86 C
ATOM 16 N7 G A 90 -17.830 -2.991 26.274 1.00 61.08 N
ATOM 17 C5 G A 90 -18.615 -2.314 25.350 1.00 60.81 C
ATOM 18 C6 G A 90 -19.095 -2.738 24.084 1.00 59.81 C
ATOM 19 O6 G A 90 -18.910 -3.827 23.526 1.00 60.17 O
ATOM 20 N1 G A 90 -19.858 -1.758 23.450 1.00 59.14 N
ATOM 21 C2 G A 90 -20.124 -0.516 23.981 1.00 59.56 C
ATOM 22 N2 G A 90 -20.880 0.298 23.229 1.00 60.05 N
ATOM 23 N3 G A 90 -19.682 -0.105 25.168 1.00 59.93 N
ATOM 24 C4 G A 90 -18.933 -1.049 25.804 1.00 61.32 C
ATOM 25 P G A 91 -22.783 -0.673 29.636 1.00 65.84 P
ATOM 26 OP1 G A 91 -23.756 -0.209 30.652 1.00 67.06 O
ATOM 27 OP2 G A 91 -22.488 -2.124 29.537 1.00 64.46 O
ATOM 28 O5' G A 91 -23.226 -0.141 28.183 1.00 63.95 O
TER

ATOM 1 O3' G B 87 -13.966 -3.103 28.302 1.00 50.66 O
ATOM 2 P A B 88 -14.570 -2.921 29.766 1.00 52.75 P
ATOM 3 OP1 A B 88 -13.599 -3.493 30.730 1.00 52.76 O
ATOM 4 OP2 A B 88 -15.967 -3.406 29.740 1.00 55.53 O
ATOM 5 O5' A B 88 -14.623 -1.334 29.921 1.00 52.30 O
ATOM 6 C5' A B 88 -13.420 -0.605 30.058 1.00 55.73 C
ATOM 7 C4' A B 88 -13.682 0.881 29.939 1.00 59.17 C
ATOM 8 O4' A B 88 -13.498 1.296 28.568 1.00 60.07 O
ATOM 9 C3' A B 88 -15.090 1.333 30.318 1.00 62.46 C
ATOM 10 O3' A B 88 -15.014 2.112 31.513 1.00 67.34 O
ATOM 11 C2' A B 88 -15.574 2.134 29.101 1.00 61.78 C
ATOM 12 O2' A B 88 -16.295 3.303 29.441 1.00 61.52 O
ATOM 13 C1' A B 88 -14.254 2.469 28.414 1.00 61.34 C
ATOM 14 N9 A B 88 -14.335 2.815 26.995 1.00 60.39 N
ATOM 15 C8 A B 88 -14.021 4.027 26.454 1.00 60.52 C
ATOM 16 N7 A B 88 -14.172 4.091 25.155 1.00 60.84 N
ATOM 17 C5 A B 88 -14.620 2.829 24.814 1.00 60.75 C
ATOM 18 C6 A B 88 -14.967 2.253 23.573 1.00 60.50 C
ATOM 19 N6 A B 88 -14.908 2.922 22.414 1.00 59.16 N
ATOM 20 N1 A B 88 -15.373 0.962 23.573 1.00 60.30 N
ATOM 21 C2 A B 88 -15.428 0.302 24.740 1.00 59.58 C
ATOM 22 N3 A B 88 -15.126 0.740 25.965 1.00 59.24 N
ATOM 23 C4 A B 88 -14.723 2.023 25.936 1.00 59.96 C
ATOM 24 P U B 89 -16.177 2.072 32.619 1.00 70.06 P
ATOM 25 OP1 U B 89 -17.398 2.666 32.021 1.00 69.97 O
ATOM 26 OP2 U B 89 -15.604 2.674 33.842 1.00 70.94 O
ATOM 27 O5' U B 89 -16.457 0.513 32.885 1.00 69.39 O
TER

Atoms:
OP1: (-20.044,-3.645,33.781)
OP2: (-18.345,-4.377,32.016)
C3': (-20.240,-0.297,29.203)
C1': (-18.347,0.207,27.983)
C5': (-18.885,-1.944,30.641)
O6: (-18.910,-3.827,23.526)
O4': (-17.900,-0.204,29.270)
C8: (-17.689,-2.143,27.253)
C2: (-20.124,-0.516,23.981)
C6: (-19.095,-2.738,24.084)
C5: (-18.615,-2.314,25.350)
C4: (-18.933,-1.049,25.804)
P: (-18.889,-3.326,32.911)
C4': (-19.039,-0.526,30.114)
C2': (-19.730,0.782,28.251)
O2': (-19.613,2.062,28.839)
N1: (-19.858,-1.758,23.450)
N2: (-20.880,0.298,23.229)
N3: (-19.682,-0.105,25.168)
N7: (-17.830,-2.991,26.274)
N9: (-18.327,-0.939,27.050)
O5': (-19.258,-2.038,32.022)
O3': (-21.402,0.094,29.918)
OP1: (-13.599,-3.493,30.730)
OP2: (-15.967,-3.406,29.740)
C3': (-15.090,1.333,30.318)
C1': (-14.254,2.469,28.414)
C5': (-13.420,-0.605,30.058)
O4': (-13.498,1.296,28.568)
C8: (-14.021,4.027,26.454)
O2': (-16.295,3.303,29.441)
C6: (-14.967,2.253,23.573)
C5: (-14.620,2.829,24.814)
C4: (-14.723,2.023,25.936)
P: (-14.570,-2.921,29.766)
C4': (-13.682,0.881,29.939)
C2': (-15.574,2.134,29.101)
C2: (-15.428,0.302,24.740)
N1: (-15.373,0.962,23.573)
N3: (-15.126,0.740,25.965)
N6: (-14.908,2.922,22.414)
N7: (-14.172,4.091,25.155)
N9: (-14.335,2.815,26.995)
O5': (-14.623,-1.334,29.921)
O3': (-15.014,2.112,31.513)
Image (generated by PyMOL):
PyMOL image
show in jmol