Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1021:A1089
Extra
PDB:
ATOM 1 O3' U A1020 -125.823 -84.566 -24.029 1.00 33.89 O
ATOM 2 P A A1021 -125.591 -84.497 -25.615 1.00 47.20 P
ATOM 3 OP1 A A1021 -125.870 -83.111 -26.064 1.00 79.89 O
ATOM 4 OP2 A A1021 -126.317 -85.635 -26.245 1.00 79.89 O
ATOM 5 O5' A A1021 -124.031 -84.745 -25.766 1.00 12.09 O
ATOM 6 C5' A A1021 -123.409 -84.639 -27.037 1.00 12.09 C
ATOM 7 C4' A A1021 -121.942 -84.864 -26.886 1.00 12.09 C
ATOM 8 O4' A A1021 -121.769 -85.944 -25.940 1.00 12.09 O
ATOM 9 C3' A A1021 -121.208 -85.256 -28.168 1.00 12.09 C
ATOM 10 O3' A A1021 -119.902 -84.670 -28.196 1.00 12.09 O
ATOM 11 C2' A A1021 -121.107 -86.778 -28.055 1.00 12.09 C
ATOM 12 O2' A A1021 -119.959 -87.307 -28.702 1.00 12.09 O
ATOM 13 C1' A A1021 -121.014 -86.971 -26.542 1.00 12.09 C
ATOM 14 N9 A A1021 -121.517 -88.254 -26.063 1.00 46.39 N
ATOM 15 C8 A A1021 -122.718 -88.531 -25.457 1.00 46.39 C
ATOM 16 N7 A A1021 -122.850 -89.785 -25.098 1.00 46.39 N
ATOM 17 C5 A A1021 -121.658 -90.377 -25.508 1.00 46.39 C
ATOM 18 C6 A A1021 -121.165 -91.701 -25.416 1.00 46.39 C
ATOM 19 N6 A A1021 -121.838 -92.715 -24.851 1.00 46.39 N
ATOM 20 N1 A A1021 -119.940 -91.949 -25.930 1.00 46.39 N
ATOM 21 C2 A A1021 -119.264 -90.942 -26.495 1.00 46.39 C
ATOM 22 N3 A A1021 -119.614 -89.666 -26.638 1.00 46.39 N
ATOM 23 C4 A A1021 -120.836 -89.447 -26.116 1.00 46.39 C
ATOM 24 P A A1022 -119.617 -83.385 -29.129 1.00 57.96 P
ATOM 25 OP1 A A1022 -120.912 -82.847 -29.640 1.00 42.55 O
ATOM 26 OP2 A A1022 -118.529 -83.735 -30.085 1.00 42.62 O
ATOM 27 O5' A A1022 -119.051 -82.302 -28.112 1.00 47.00 O
TER
ATOM 1 O3' C B1088 -114.042 -96.886 -21.704 1.00 12.47 O
ATOM 2 P U B1089 -114.584 -97.026 -23.208 1.00 32.52 P
ATOM 3 OP1 U B1089 -115.177 -98.385 -23.341 1.00 24.37 O
ATOM 4 OP2 U B1089 -113.478 -96.628 -24.116 1.00 24.37 O
ATOM 5 O5' U B1089 -115.762 -95.950 -23.283 1.00 30.94 O
ATOM 6 C5' U B1089 -116.784 -95.938 -22.275 1.00 30.94 C
ATOM 7 C4' U B1089 -118.000 -95.183 -22.745 1.00 30.94 C
ATOM 8 O4' U B1089 -117.708 -93.769 -22.747 1.00 30.94 O
ATOM 9 C3' U B1089 -118.509 -95.528 -24.139 1.00 30.94 C
ATOM 10 O3' U B1089 -119.948 -95.461 -24.154 1.00 30.94 O
ATOM 11 C2' U B1089 -117.910 -94.413 -24.992 1.00 30.94 C
ATOM 12 O2' U B1089 -118.602 -94.152 -26.196 1.00 30.94 O
ATOM 13 C1' U B1089 -117.981 -93.234 -24.023 1.00 30.94 C
ATOM 14 N1 U B1089 -117.059 -92.114 -24.276 1.00 50.29 N
ATOM 15 C2 U B1089 -117.425 -90.860 -23.788 1.00 50.29 C
ATOM 16 O2 U B1089 -118.438 -90.666 -23.142 1.00 50.29 O
ATOM 17 N3 U B1089 -116.555 -89.845 -24.088 1.00 50.29 N
ATOM 18 C4 U B1089 -115.380 -89.943 -24.805 1.00 50.29 C
ATOM 19 O4 U B1089 -114.757 -88.916 -25.082 1.00 50.29 O
ATOM 20 C5 U B1089 -115.057 -91.268 -25.249 1.00 50.29 C
ATOM 21 C6 U B1089 -115.884 -92.281 -24.978 1.00 50.29 C
ATOM 22 P U B1090 -120.791 -96.477 -25.082 1.00 25.85 P
ATOM 23 OP1 U B1090 -120.404 -97.868 -24.725 1.00 72.32 O
ATOM 24 OP2 U B1090 -120.651 -96.016 -26.490 1.00 72.31 O
ATOM 25 O5' U B1090 -122.305 -96.250 -24.655 1.00 57.55 O
TER
ATOM 2 P A A1021 -125.591 -84.497 -25.615 1.00 47.20 P
ATOM 3 OP1 A A1021 -125.870 -83.111 -26.064 1.00 79.89 O
ATOM 4 OP2 A A1021 -126.317 -85.635 -26.245 1.00 79.89 O
ATOM 5 O5' A A1021 -124.031 -84.745 -25.766 1.00 12.09 O
ATOM 6 C5' A A1021 -123.409 -84.639 -27.037 1.00 12.09 C
ATOM 7 C4' A A1021 -121.942 -84.864 -26.886 1.00 12.09 C
ATOM 8 O4' A A1021 -121.769 -85.944 -25.940 1.00 12.09 O
ATOM 9 C3' A A1021 -121.208 -85.256 -28.168 1.00 12.09 C
ATOM 10 O3' A A1021 -119.902 -84.670 -28.196 1.00 12.09 O
ATOM 11 C2' A A1021 -121.107 -86.778 -28.055 1.00 12.09 C
ATOM 12 O2' A A1021 -119.959 -87.307 -28.702 1.00 12.09 O
ATOM 13 C1' A A1021 -121.014 -86.971 -26.542 1.00 12.09 C
ATOM 14 N9 A A1021 -121.517 -88.254 -26.063 1.00 46.39 N
ATOM 15 C8 A A1021 -122.718 -88.531 -25.457 1.00 46.39 C
ATOM 16 N7 A A1021 -122.850 -89.785 -25.098 1.00 46.39 N
ATOM 17 C5 A A1021 -121.658 -90.377 -25.508 1.00 46.39 C
ATOM 18 C6 A A1021 -121.165 -91.701 -25.416 1.00 46.39 C
ATOM 19 N6 A A1021 -121.838 -92.715 -24.851 1.00 46.39 N
ATOM 20 N1 A A1021 -119.940 -91.949 -25.930 1.00 46.39 N
ATOM 21 C2 A A1021 -119.264 -90.942 -26.495 1.00 46.39 C
ATOM 22 N3 A A1021 -119.614 -89.666 -26.638 1.00 46.39 N
ATOM 23 C4 A A1021 -120.836 -89.447 -26.116 1.00 46.39 C
ATOM 24 P A A1022 -119.617 -83.385 -29.129 1.00 57.96 P
ATOM 25 OP1 A A1022 -120.912 -82.847 -29.640 1.00 42.55 O
ATOM 26 OP2 A A1022 -118.529 -83.735 -30.085 1.00 42.62 O
ATOM 27 O5' A A1022 -119.051 -82.302 -28.112 1.00 47.00 O
TER
ATOM 1 O3' C B1088 -114.042 -96.886 -21.704 1.00 12.47 O
ATOM 2 P U B1089 -114.584 -97.026 -23.208 1.00 32.52 P
ATOM 3 OP1 U B1089 -115.177 -98.385 -23.341 1.00 24.37 O
ATOM 4 OP2 U B1089 -113.478 -96.628 -24.116 1.00 24.37 O
ATOM 5 O5' U B1089 -115.762 -95.950 -23.283 1.00 30.94 O
ATOM 6 C5' U B1089 -116.784 -95.938 -22.275 1.00 30.94 C
ATOM 7 C4' U B1089 -118.000 -95.183 -22.745 1.00 30.94 C
ATOM 8 O4' U B1089 -117.708 -93.769 -22.747 1.00 30.94 O
ATOM 9 C3' U B1089 -118.509 -95.528 -24.139 1.00 30.94 C
ATOM 10 O3' U B1089 -119.948 -95.461 -24.154 1.00 30.94 O
ATOM 11 C2' U B1089 -117.910 -94.413 -24.992 1.00 30.94 C
ATOM 12 O2' U B1089 -118.602 -94.152 -26.196 1.00 30.94 O
ATOM 13 C1' U B1089 -117.981 -93.234 -24.023 1.00 30.94 C
ATOM 14 N1 U B1089 -117.059 -92.114 -24.276 1.00 50.29 N
ATOM 15 C2 U B1089 -117.425 -90.860 -23.788 1.00 50.29 C
ATOM 16 O2 U B1089 -118.438 -90.666 -23.142 1.00 50.29 O
ATOM 17 N3 U B1089 -116.555 -89.845 -24.088 1.00 50.29 N
ATOM 18 C4 U B1089 -115.380 -89.943 -24.805 1.00 50.29 C
ATOM 19 O4 U B1089 -114.757 -88.916 -25.082 1.00 50.29 O
ATOM 20 C5 U B1089 -115.057 -91.268 -25.249 1.00 50.29 C
ATOM 21 C6 U B1089 -115.884 -92.281 -24.978 1.00 50.29 C
ATOM 22 P U B1090 -120.791 -96.477 -25.082 1.00 25.85 P
ATOM 23 OP1 U B1090 -120.404 -97.868 -24.725 1.00 72.32 O
ATOM 24 OP2 U B1090 -120.651 -96.016 -26.490 1.00 72.31 O
ATOM 25 O5' U B1090 -122.305 -96.250 -24.655 1.00 57.55 O
TER
Atoms:
OP1: (-125.870,-83.111,-26.064)
OP2: (-126.317,-85.635,-26.245)
C3': (-121.208,-85.256,-28.168)
C1': (-121.014,-86.971,-26.542)
C5': (-123.409,-84.639,-27.037)
O4': (-121.769,-85.944,-25.940)
C8: (-122.718,-88.531,-25.457)
O2': (-119.959,-87.307,-28.702)
C6: (-121.165,-91.701,-25.416)
C5: (-121.658,-90.377,-25.508)
C4: (-120.836,-89.447,-26.116)
P: (-125.591,-84.497,-25.615)
C4': (-121.942,-84.864,-26.886)
C2': (-121.107,-86.778,-28.055)
C2: (-119.264,-90.942,-26.495)
N1: (-119.940,-91.949,-25.930)
N3: (-119.614,-89.666,-26.638)
N6: (-121.838,-92.715,-24.851)
N7: (-122.850,-89.785,-25.098)
N9: (-121.517,-88.254,-26.063)
O5': (-124.031,-84.745,-25.766)
O3': (-119.902,-84.670,-28.196)
OP2: (-126.317,-85.635,-26.245)
C3': (-121.208,-85.256,-28.168)
C1': (-121.014,-86.971,-26.542)
C5': (-123.409,-84.639,-27.037)
O4': (-121.769,-85.944,-25.940)
C8: (-122.718,-88.531,-25.457)
O2': (-119.959,-87.307,-28.702)
C6: (-121.165,-91.701,-25.416)
C5: (-121.658,-90.377,-25.508)
C4: (-120.836,-89.447,-26.116)
P: (-125.591,-84.497,-25.615)
C4': (-121.942,-84.864,-26.886)
C2': (-121.107,-86.778,-28.055)
C2: (-119.264,-90.942,-26.495)
N1: (-119.940,-91.949,-25.930)
N3: (-119.614,-89.666,-26.638)
N6: (-121.838,-92.715,-24.851)
N7: (-122.850,-89.785,-25.098)
N9: (-121.517,-88.254,-26.063)
O5': (-124.031,-84.745,-25.766)
O3': (-119.902,-84.670,-28.196)
C4: (-115.380,-89.943,-24.805)
N3: (-116.555,-89.845,-24.088)
OP1: (-115.177,-98.385,-23.341)
OP2: (-113.478,-96.628,-24.116)
C2: (-117.425,-90.860,-23.788)
C1': (-117.981,-93.234,-24.023)
C3': (-118.509,-95.528,-24.139)
O5': (-115.762,-95.950,-23.283)
O4': (-117.708,-93.769,-22.747)
C5': (-116.784,-95.938,-22.275)
P: (-114.584,-97.026,-23.208)
C4': (-118.000,-95.183,-22.745)
C2': (-117.910,-94.413,-24.992)
O2': (-118.602,-94.152,-26.196)
N1: (-117.059,-92.114,-24.276)
O4: (-114.757,-88.916,-25.082)
O2: (-118.438,-90.666,-23.142)
C6: (-115.884,-92.281,-24.978)
C5: (-115.057,-91.268,-25.249)
O3': (-119.948,-95.461,-24.154)
N3: (-116.555,-89.845,-24.088)
OP1: (-115.177,-98.385,-23.341)
OP2: (-113.478,-96.628,-24.116)
C2: (-117.425,-90.860,-23.788)
C1': (-117.981,-93.234,-24.023)
C3': (-118.509,-95.528,-24.139)
O5': (-115.762,-95.950,-23.283)
O4': (-117.708,-93.769,-22.747)
C5': (-116.784,-95.938,-22.275)
P: (-114.584,-97.026,-23.208)
C4': (-118.000,-95.183,-22.745)
C2': (-117.910,-94.413,-24.992)
O2': (-118.602,-94.152,-26.196)
N1: (-117.059,-92.114,-24.276)
O4: (-114.757,-88.916,-25.082)
O2: (-118.438,-90.666,-23.142)
C6: (-115.884,-92.281,-24.978)
C5: (-115.057,-91.268,-25.249)
O3': (-119.948,-95.461,-24.154)
Image (generated by PyMOL):