ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A582:A581

Extra

PDB:
ATOM 1 O3' A A 581 88.965 -81.405 -11.372 1.00 34.80 O
ATOM 2 P G A 582 89.174 -80.463 -12.653 1.00 34.23 P
ATOM 3 OP1 G A 582 87.858 -79.821 -12.928 1.00 38.01 O
ATOM 4 OP2 G A 582 89.797 -81.288 -13.717 1.00 33.78 O
ATOM 5 O5' G A 582 90.206 -79.382 -12.150 1.00 25.08 O
ATOM 6 C5' G A 582 89.770 -78.206 -11.515 1.00 22.23 C
ATOM 7 C4' G A 582 89.415 -78.473 -10.096 1.00 21.96 C
ATOM 8 O4' G A 582 90.545 -79.070 -9.431 1.00 36.75 O
ATOM 9 C3' G A 582 89.040 -77.258 -9.294 1.00 30.19 C
ATOM 10 O3' G A 582 88.023 -77.616 -8.377 1.00 40.03 O
ATOM 11 C2' G A 582 90.309 -76.922 -8.531 1.00 29.17 C
ATOM 12 O2' G A 582 90.079 -76.263 -7.310 1.00 32.20 O
ATOM 13 C1' G A 582 90.925 -78.293 -8.311 1.00 33.75 C
ATOM 14 N9 G A 582 92.393 -78.272 -8.251 1.00 27.29 N
ATOM 15 C8 G A 582 93.232 -78.999 -9.047 1.00 25.60 C
ATOM 16 N7 G A 582 94.482 -78.769 -8.792 1.00 32.44 N
ATOM 17 C5 G A 582 94.477 -77.824 -7.783 1.00 33.77 C
ATOM 18 C6 G A 582 95.556 -77.189 -7.104 1.00 33.06 C
ATOM 19 O6 G A 582 96.771 -77.316 -7.239 1.00 30.75 O
ATOM 20 N1 G A 582 95.090 -76.313 -6.150 1.00 34.66 N
ATOM 21 C2 G A 582 93.776 -76.068 -5.880 1.00 33.55 C
ATOM 22 N2 G A 582 93.585 -75.172 -4.900 1.00 43.03 N
ATOM 23 N3 G A 582 92.771 -76.649 -6.501 1.00 25.84 N
ATOM 24 C4 G A 582 93.186 -77.510 -7.435 1.00 28.17 C
ATOM 25 P C A 583 86.501 -77.259 -8.709 1.00 36.26 P
ATOM 26 OP1 C A 583 85.654 -78.088 -7.790 1.00 45.66 O
ATOM 27 OP2 C A 583 86.320 -77.389 -10.196 1.00 31.01 O
ATOM 28 O5' C A 583 86.414 -75.742 -8.291 1.00 29.11 O
TER

ATOM 1 O3' A B 580 93.616 -80.536 -12.614 1.00 24.19 O
ATOM 2 P A B 581 93.691 -82.134 -12.794 1.00 26.10 P
ATOM 3 OP1 A B 581 95.063 -82.541 -12.476 1.00 46.15 O
ATOM 4 OP2 A B 581 93.144 -82.467 -14.141 1.00 34.75 O
ATOM 5 O5' A B 581 92.699 -82.641 -11.653 1.00 30.73 O
ATOM 6 C5' A B 581 91.535 -83.402 -11.958 1.00 34.33 C
ATOM 7 C4' A B 581 90.486 -83.255 -10.879 1.00 31.98 C
ATOM 8 O4' A B 581 90.995 -83.780 -9.625 1.00 31.94 O
ATOM 9 C3' A B 581 90.052 -81.824 -10.565 1.00 29.96 C
ATOM 10 O3' A B 581 88.965 -81.405 -11.372 1.00 34.80 O
ATOM 11 C2' A B 581 89.680 -81.886 -9.089 1.00 29.41 C
ATOM 12 O2' A B 581 88.344 -82.348 -8.929 1.00 34.28 O
ATOM 13 C1' A B 581 90.624 -82.952 -8.554 1.00 30.21 C
ATOM 14 N9 A B 581 91.841 -82.368 -7.958 1.00 31.89 N
ATOM 15 C8 A B 581 93.142 -82.550 -8.320 1.00 32.46 C
ATOM 16 N7 A B 581 94.018 -81.909 -7.576 1.00 35.50 N
ATOM 17 C5 A B 581 93.237 -81.255 -6.650 1.00 33.04 C
ATOM 18 C6 A B 581 93.570 -80.399 -5.590 1.00 31.27 C
ATOM 19 N6 A B 581 94.814 -80.055 -5.285 1.00 33.19 N
ATOM 20 N1 A B 581 92.567 -79.903 -4.848 1.00 32.20 N
ATOM 21 C2 A B 581 91.311 -80.266 -5.163 1.00 33.78 C
ATOM 22 N3 A B 581 90.859 -81.073 -6.128 1.00 32.12 N
ATOM 23 C4 A B 581 91.894 -81.535 -6.861 1.00 35.44 C
ATOM 24 P G B 582 89.174 -80.463 -12.653 1.00 34.23 P
ATOM 25 OP1 G B 582 87.858 -79.821 -12.928 1.00 38.01 O
ATOM 26 OP2 G B 582 89.797 -81.288 -13.717 1.00 33.78 O
ATOM 27 O5' G B 582 90.206 -79.382 -12.150 1.00 25.08 O
TER

Atoms:
OP1: (87.858,-79.821,-12.928)
OP2: (89.797,-81.288,-13.717)
C3': (89.040,-77.258,-9.294)
C1': (90.925,-78.293,-8.311)
C5': (89.770,-78.206,-11.515)
O6: (96.771,-77.316,-7.239)
O4': (90.545,-79.070,-9.431)
C8: (93.232,-78.999,-9.047)
C2: (93.776,-76.068,-5.880)
C6: (95.556,-77.189,-7.104)
C5: (94.477,-77.824,-7.783)
C4: (93.186,-77.510,-7.435)
P: (89.174,-80.463,-12.653)
C4': (89.415,-78.473,-10.096)
C2': (90.309,-76.922,-8.531)
O2': (90.079,-76.263,-7.310)
N1: (95.090,-76.313,-6.150)
N2: (93.585,-75.172,-4.900)
N3: (92.771,-76.649,-6.501)
N7: (94.482,-78.769,-8.792)
N9: (92.393,-78.272,-8.251)
O5': (90.206,-79.382,-12.150)
O3': (88.023,-77.616,-8.377)
OP1: (95.063,-82.541,-12.476)
OP2: (93.144,-82.467,-14.141)
C3': (90.052,-81.824,-10.565)
C1': (90.624,-82.952,-8.554)
C5': (91.535,-83.402,-11.958)
O4': (90.995,-83.780,-9.625)
C8: (93.142,-82.550,-8.320)
O2': (88.344,-82.348,-8.929)
C6: (93.570,-80.399,-5.590)
C5: (93.237,-81.255,-6.650)
C4: (91.894,-81.535,-6.861)
P: (93.691,-82.134,-12.794)
C4': (90.486,-83.255,-10.879)
C2': (89.680,-81.886,-9.089)
C2: (91.311,-80.266,-5.163)
N1: (92.567,-79.903,-4.848)
N3: (90.859,-81.073,-6.128)
N6: (94.814,-80.055,-5.285)
N7: (94.018,-81.909,-7.576)
N9: (91.841,-82.368,-7.958)
O5': (92.699,-82.641,-11.653)
O3': (88.965,-81.405,-11.372)
Image (generated by PyMOL):
PyMOL image
show in jmol