Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:247:246
Extra
PDB:
ATOM 1 O3' A A 46 -41.933 49.047 58.703 1.00 59.60 O
ATOM 2 P G A 47 -40.949 47.853 58.267 1.00 56.97 P
ATOM 3 OP1 G A 47 -40.991 46.858 59.362 1.00 56.48 O
ATOM 4 OP2 G A 47 -39.640 48.471 57.905 1.00 56.85 O
ATOM 5 O5' G A 47 -41.626 47.231 56.960 1.00 57.47 O
ATOM 6 C5' G A 47 -41.541 47.897 55.701 1.00 57.99 C
ATOM 7 C4' G A 47 -40.510 47.292 54.764 1.00 57.94 C
ATOM 8 O4' G A 47 -41.082 46.146 54.084 1.00 58.16 O
ATOM 9 C3' G A 47 -40.040 48.214 53.641 1.00 58.38 C
ATOM 10 O3' G A 47 -38.942 49.034 54.026 1.00 58.11 O
ATOM 11 C2' G A 47 -39.703 47.254 52.519 1.00 58.56 C
ATOM 12 O2' G A 47 -38.408 46.716 52.693 1.00 58.09 O
ATOM 13 C1' G A 47 -40.726 46.149 52.726 1.00 58.58 C
ATOM 14 N9 G A 47 -41.929 46.406 51.933 1.00 59.27 N
ATOM 15 C8 G A 47 -43.178 46.747 52.389 1.00 59.51 C
ATOM 16 N7 G A 47 -44.029 46.956 51.420 1.00 60.20 N
ATOM 17 C5 G A 47 -43.297 46.761 50.255 1.00 60.43 C
ATOM 18 C6 G A 47 -43.688 46.843 48.882 1.00 61.16 C
ATOM 19 O6 G A 47 -44.779 47.132 48.388 1.00 61.79 O
ATOM 20 N1 G A 47 -42.635 46.539 48.026 1.00 61.17 N
ATOM 21 C2 G A 47 -41.365 46.228 48.452 1.00 60.56 C
ATOM 22 N2 G A 47 -40.499 45.990 47.457 1.00 60.73 N
ATOM 23 N3 G A 47 -40.980 46.156 49.725 1.00 59.88 N
ATOM 24 C4 G A 47 -41.988 46.430 50.566 1.00 59.85 C
ATOM 25 P C A 48 -38.800 50.560 53.510 1.00 58.73 P
ATOM 26 OP1 C A 48 -37.662 51.157 54.245 1.00 58.31 O
ATOM 27 OP2 C A 48 -40.044 51.139 53.653 1.00 59.12 O
ATOM 28 O5' C A 48 -38.449 50.417 51.960 1.00 59.22 O
TER
ATOM 1 O3' A B 45 -44.617 45.323 55.345 1.00 57.59 O
ATOM 2 P A B 46 -45.660 46.352 55.985 1.00 61.17 P
ATOM 3 OP1 A B 46 -46.692 45.551 56.693 1.00 61.15 O
ATOM 4 OP2 A B 46 -46.069 47.289 54.896 1.00 61.85 O
ATOM 5 O5' A B 46 -44.830 47.146 57.036 1.00 60.67 O
ATOM 6 C5' A B 46 -45.232 48.453 57.368 1.00 60.92 C
ATOM 7 C4' A B 46 -44.066 49.277 57.721 1.00 60.58 C
ATOM 8 O4' A B 46 -44.510 50.604 58.013 1.00 60.89 O
ATOM 9 C3' A B 46 -43.304 48.790 58.921 1.00 59.88 C
ATOM 10 O3' A B 46 -41.933 49.047 58.703 1.00 59.60 O
ATOM 11 C2' A B 46 -43.842 49.659 60.051 1.00 59.86 C
ATOM 12 O2' A B 46 -42.919 49.883 61.089 1.00 59.34 O
ATOM 13 C1' A B 46 -44.186 50.956 59.327 1.00 60.45 C
ATOM 14 N9 A B 46 -45.343 51.671 59.851 1.00 60.81 N
ATOM 15 C8 A B 46 -46.579 51.517 59.308 1.00 61.35 C
ATOM 16 N7 A B 46 -47.464 52.307 59.833 1.00 61.67 N
ATOM 17 C5 A B 46 -46.786 53.056 60.773 1.00 61.32 C
ATOM 18 C6 A B 46 -47.178 54.052 61.683 1.00 61.44 C
ATOM 19 N6 A B 46 -48.410 54.501 61.818 1.00 61.95 N
ATOM 20 N1 A B 46 -46.272 54.613 62.476 1.00 61.05 N
ATOM 21 C2 A B 46 -45.046 54.166 62.353 1.00 60.58 C
ATOM 22 N3 A B 46 -44.544 53.212 61.564 1.00 60.40 N
ATOM 23 C4 A B 46 -45.468 52.687 60.767 1.00 60.80 C
ATOM 24 P G B 47 -40.949 47.853 58.267 1.00 56.97 P
ATOM 25 OP1 G B 47 -40.991 46.858 59.362 1.00 56.48 O
ATOM 26 OP2 G B 47 -39.640 48.471 57.905 1.00 56.85 O
ATOM 27 O5' G B 47 -41.626 47.231 56.960 1.00 57.47 O
TER
ATOM 2 P G A 47 -40.949 47.853 58.267 1.00 56.97 P
ATOM 3 OP1 G A 47 -40.991 46.858 59.362 1.00 56.48 O
ATOM 4 OP2 G A 47 -39.640 48.471 57.905 1.00 56.85 O
ATOM 5 O5' G A 47 -41.626 47.231 56.960 1.00 57.47 O
ATOM 6 C5' G A 47 -41.541 47.897 55.701 1.00 57.99 C
ATOM 7 C4' G A 47 -40.510 47.292 54.764 1.00 57.94 C
ATOM 8 O4' G A 47 -41.082 46.146 54.084 1.00 58.16 O
ATOM 9 C3' G A 47 -40.040 48.214 53.641 1.00 58.38 C
ATOM 10 O3' G A 47 -38.942 49.034 54.026 1.00 58.11 O
ATOM 11 C2' G A 47 -39.703 47.254 52.519 1.00 58.56 C
ATOM 12 O2' G A 47 -38.408 46.716 52.693 1.00 58.09 O
ATOM 13 C1' G A 47 -40.726 46.149 52.726 1.00 58.58 C
ATOM 14 N9 G A 47 -41.929 46.406 51.933 1.00 59.27 N
ATOM 15 C8 G A 47 -43.178 46.747 52.389 1.00 59.51 C
ATOM 16 N7 G A 47 -44.029 46.956 51.420 1.00 60.20 N
ATOM 17 C5 G A 47 -43.297 46.761 50.255 1.00 60.43 C
ATOM 18 C6 G A 47 -43.688 46.843 48.882 1.00 61.16 C
ATOM 19 O6 G A 47 -44.779 47.132 48.388 1.00 61.79 O
ATOM 20 N1 G A 47 -42.635 46.539 48.026 1.00 61.17 N
ATOM 21 C2 G A 47 -41.365 46.228 48.452 1.00 60.56 C
ATOM 22 N2 G A 47 -40.499 45.990 47.457 1.00 60.73 N
ATOM 23 N3 G A 47 -40.980 46.156 49.725 1.00 59.88 N
ATOM 24 C4 G A 47 -41.988 46.430 50.566 1.00 59.85 C
ATOM 25 P C A 48 -38.800 50.560 53.510 1.00 58.73 P
ATOM 26 OP1 C A 48 -37.662 51.157 54.245 1.00 58.31 O
ATOM 27 OP2 C A 48 -40.044 51.139 53.653 1.00 59.12 O
ATOM 28 O5' C A 48 -38.449 50.417 51.960 1.00 59.22 O
TER
ATOM 1 O3' A B 45 -44.617 45.323 55.345 1.00 57.59 O
ATOM 2 P A B 46 -45.660 46.352 55.985 1.00 61.17 P
ATOM 3 OP1 A B 46 -46.692 45.551 56.693 1.00 61.15 O
ATOM 4 OP2 A B 46 -46.069 47.289 54.896 1.00 61.85 O
ATOM 5 O5' A B 46 -44.830 47.146 57.036 1.00 60.67 O
ATOM 6 C5' A B 46 -45.232 48.453 57.368 1.00 60.92 C
ATOM 7 C4' A B 46 -44.066 49.277 57.721 1.00 60.58 C
ATOM 8 O4' A B 46 -44.510 50.604 58.013 1.00 60.89 O
ATOM 9 C3' A B 46 -43.304 48.790 58.921 1.00 59.88 C
ATOM 10 O3' A B 46 -41.933 49.047 58.703 1.00 59.60 O
ATOM 11 C2' A B 46 -43.842 49.659 60.051 1.00 59.86 C
ATOM 12 O2' A B 46 -42.919 49.883 61.089 1.00 59.34 O
ATOM 13 C1' A B 46 -44.186 50.956 59.327 1.00 60.45 C
ATOM 14 N9 A B 46 -45.343 51.671 59.851 1.00 60.81 N
ATOM 15 C8 A B 46 -46.579 51.517 59.308 1.00 61.35 C
ATOM 16 N7 A B 46 -47.464 52.307 59.833 1.00 61.67 N
ATOM 17 C5 A B 46 -46.786 53.056 60.773 1.00 61.32 C
ATOM 18 C6 A B 46 -47.178 54.052 61.683 1.00 61.44 C
ATOM 19 N6 A B 46 -48.410 54.501 61.818 1.00 61.95 N
ATOM 20 N1 A B 46 -46.272 54.613 62.476 1.00 61.05 N
ATOM 21 C2 A B 46 -45.046 54.166 62.353 1.00 60.58 C
ATOM 22 N3 A B 46 -44.544 53.212 61.564 1.00 60.40 N
ATOM 23 C4 A B 46 -45.468 52.687 60.767 1.00 60.80 C
ATOM 24 P G B 47 -40.949 47.853 58.267 1.00 56.97 P
ATOM 25 OP1 G B 47 -40.991 46.858 59.362 1.00 56.48 O
ATOM 26 OP2 G B 47 -39.640 48.471 57.905 1.00 56.85 O
ATOM 27 O5' G B 47 -41.626 47.231 56.960 1.00 57.47 O
TER
Atoms:
OP1: (-40.991,46.858,59.362)
OP2: (-39.640,48.471,57.905)
C3': (-40.040,48.214,53.641)
C1': (-40.726,46.149,52.726)
C5': (-41.541,47.897,55.701)
O6: (-44.779,47.132,48.388)
O4': (-41.082,46.146,54.084)
C8: (-43.178,46.747,52.389)
C2: (-41.365,46.228,48.452)
C6: (-43.688,46.843,48.882)
C5: (-43.297,46.761,50.255)
C4: (-41.988,46.430,50.566)
P: (-40.949,47.853,58.267)
C4': (-40.510,47.292,54.764)
C2': (-39.703,47.254,52.519)
O2': (-38.408,46.716,52.693)
N1: (-42.635,46.539,48.026)
N2: (-40.499,45.990,47.457)
N3: (-40.980,46.156,49.725)
N7: (-44.029,46.956,51.420)
N9: (-41.929,46.406,51.933)
O5': (-41.626,47.231,56.960)
O3': (-38.942,49.034,54.026)
OP2: (-39.640,48.471,57.905)
C3': (-40.040,48.214,53.641)
C1': (-40.726,46.149,52.726)
C5': (-41.541,47.897,55.701)
O6: (-44.779,47.132,48.388)
O4': (-41.082,46.146,54.084)
C8: (-43.178,46.747,52.389)
C2: (-41.365,46.228,48.452)
C6: (-43.688,46.843,48.882)
C5: (-43.297,46.761,50.255)
C4: (-41.988,46.430,50.566)
P: (-40.949,47.853,58.267)
C4': (-40.510,47.292,54.764)
C2': (-39.703,47.254,52.519)
O2': (-38.408,46.716,52.693)
N1: (-42.635,46.539,48.026)
N2: (-40.499,45.990,47.457)
N3: (-40.980,46.156,49.725)
N7: (-44.029,46.956,51.420)
N9: (-41.929,46.406,51.933)
O5': (-41.626,47.231,56.960)
O3': (-38.942,49.034,54.026)
OP1: (-46.692,45.551,56.693)
OP2: (-46.069,47.289,54.896)
C3': (-43.304,48.790,58.921)
C1': (-44.186,50.956,59.327)
C5': (-45.232,48.453,57.368)
O4': (-44.510,50.604,58.013)
C8: (-46.579,51.517,59.308)
O2': (-42.919,49.883,61.089)
C6: (-47.178,54.052,61.683)
C5: (-46.786,53.056,60.773)
C4: (-45.468,52.687,60.767)
P: (-45.660,46.352,55.985)
C4': (-44.066,49.277,57.721)
C2': (-43.842,49.659,60.051)
C2: (-45.046,54.166,62.353)
N1: (-46.272,54.613,62.476)
N3: (-44.544,53.212,61.564)
N6: (-48.410,54.501,61.818)
N7: (-47.464,52.307,59.833)
N9: (-45.343,51.671,59.851)
O5': (-44.830,47.146,57.036)
O3': (-41.933,49.047,58.703)
OP2: (-46.069,47.289,54.896)
C3': (-43.304,48.790,58.921)
C1': (-44.186,50.956,59.327)
C5': (-45.232,48.453,57.368)
O4': (-44.510,50.604,58.013)
C8: (-46.579,51.517,59.308)
O2': (-42.919,49.883,61.089)
C6: (-47.178,54.052,61.683)
C5: (-46.786,53.056,60.773)
C4: (-45.468,52.687,60.767)
P: (-45.660,46.352,55.985)
C4': (-44.066,49.277,57.721)
C2': (-43.842,49.659,60.051)
C2: (-45.046,54.166,62.353)
N1: (-46.272,54.613,62.476)
N3: (-44.544,53.212,61.564)
N6: (-48.410,54.501,61.818)
N7: (-47.464,52.307,59.833)
N9: (-45.343,51.671,59.851)
O5': (-44.830,47.146,57.036)
O3': (-41.933,49.047,58.703)
Image (generated by PyMOL):