ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A1217:A1218

Extra

PDB:
ATOM 1 O3' C A1216 13.054 104.276 113.340 1.00 42.31 O
ATOM 2 P G A1217 13.065 104.101 111.746 1.00 40.54 P
ATOM 3 OP1 G A1217 12.989 105.455 111.149 1.00 40.42 O
ATOM 4 OP2 G A1217 12.059 103.074 111.390 1.00 40.77 O
ATOM 5 O5' G A1217 14.535 103.599 111.448 1.00 38.89 O
ATOM 6 C5' G A1217 15.629 104.518 111.515 1.00 38.41 C
ATOM 7 C4' G A1217 16.920 103.778 111.333 1.00 38.89 C
ATOM 8 O4' G A1217 16.978 102.700 112.302 1.00 39.85 O
ATOM 9 C3' G A1217 16.988 103.089 109.992 1.00 38.31 C
ATOM 10 O3' G A1217 17.460 104.004 109.029 1.00 36.45 O
ATOM 11 C2' G A1217 17.901 101.900 110.250 1.00 40.49 C
ATOM 12 O2' G A1217 19.264 102.262 110.150 1.00 41.48 O
ATOM 13 C1' G A1217 17.522 101.534 111.697 1.00 40.46 C
ATOM 14 N9 G A1217 16.568 100.438 111.888 1.00 40.80 N
ATOM 15 C8 G A1217 15.193 100.544 111.971 1.00 41.78 C
ATOM 16 N7 G A1217 14.600 99.398 112.164 1.00 42.55 N
ATOM 17 C5 G A1217 15.640 98.478 112.209 1.00 41.20 C
ATOM 18 C6 G A1217 15.610 97.076 112.393 1.00 41.57 C
ATOM 19 O6 G A1217 14.630 96.340 112.550 1.00 42.75 O
ATOM 20 N1 G A1217 16.888 96.537 112.385 1.00 40.61 N
ATOM 21 C2 G A1217 18.046 97.250 112.224 1.00 39.81 C
ATOM 22 N2 G A1217 19.187 96.541 112.284 1.00 40.55 N
ATOM 23 N3 G A1217 18.089 98.556 112.031 1.00 39.79 N
ATOM 24 C4 G A1217 16.860 99.103 112.039 1.00 40.21 C
ATOM 25 P A A1218 16.823 103.991 107.569 1.00 37.34 P
ATOM 26 OP1 A A1218 17.015 105.303 106.916 1.00 38.83 O
ATOM 27 OP2 A A1218 15.475 103.391 107.622 1.00 37.92 O
ATOM 28 O5' A A1218 17.736 102.951 106.814 1.00 37.09 O
TER

ATOM 1 O3' G B1217 17.460 104.004 109.029 1.00 36.45 O
ATOM 2 P A B1218 16.823 103.991 107.569 1.00 37.34 P
ATOM 3 OP1 A B1218 17.015 105.303 106.916 1.00 38.83 O
ATOM 4 OP2 A B1218 15.475 103.391 107.622 1.00 37.92 O
ATOM 5 O5' A B1218 17.736 102.951 106.814 1.00 37.09 O
ATOM 6 C5' A B1218 17.349 102.481 105.553 1.00 34.35 C
ATOM 7 C4' A B1218 18.541 102.305 104.677 1.00 31.93 C
ATOM 8 O4' A B1218 19.479 101.386 105.288 1.00 31.64 O
ATOM 9 C3' A B1218 18.157 101.638 103.382 1.00 31.13 C
ATOM 10 O3' A B1218 17.675 102.613 102.474 1.00 31.87 O
ATOM 11 C2' A B1218 19.472 101.033 102.952 1.00 31.51 C
ATOM 12 O2' A B1218 20.290 102.066 102.458 1.00 30.70 O
ATOM 13 C1' A B1218 20.023 100.539 104.295 1.00 31.09 C
ATOM 14 N9 A B1218 19.683 99.157 104.648 1.00 32.46 N
ATOM 15 C8 A B1218 18.579 98.720 105.349 1.00 33.67 C
ATOM 16 N7 A B1218 18.543 97.421 105.521 1.00 33.51 N
ATOM 17 C5 A B1218 19.699 96.969 104.895 1.00 32.22 C
ATOM 18 C6 A B1218 20.243 95.675 104.721 1.00 31.75 C
ATOM 19 N6 A B1218 19.683 94.555 105.194 1.00 30.64 N
ATOM 20 N1 A B1218 21.396 95.570 104.037 1.00 31.55 N
ATOM 21 C2 A B1218 21.963 96.685 103.569 1.00 31.87 C
ATOM 22 N3 A B1218 21.558 97.955 103.675 1.00 31.87 N
ATOM 23 C4 A B1218 20.407 98.027 104.353 1.00 31.71 C
ATOM 24 P G B1219 16.444 102.270 101.500 1.00 33.82 P
ATOM 25 OP1 G B1219 15.933 103.582 101.051 1.00 34.01 O
ATOM 26 OP2 G B1219 15.513 101.286 102.101 1.00 31.18 O
ATOM 27 O5' G B1219 17.122 101.560 100.247 1.00 32.05 O
TER

Atoms:
OP1: (12.989,105.455,111.149)
OP2: (12.059,103.074,111.390)
C3': (16.988,103.089,109.992)
C1': (17.522,101.534,111.697)
C5': (15.629,104.518,111.515)
O6: (14.630,96.340,112.550)
O4': (16.978,102.700,112.302)
C8: (15.193,100.544,111.971)
C2: (18.046,97.250,112.224)
C6: (15.610,97.076,112.393)
C5: (15.640,98.478,112.209)
C4: (16.860,99.103,112.039)
P: (13.065,104.101,111.746)
C4': (16.920,103.778,111.333)
C2': (17.901,101.900,110.250)
O2': (19.264,102.262,110.150)
N1: (16.888,96.537,112.385)
N2: (19.187,96.541,112.284)
N3: (18.089,98.556,112.031)
N7: (14.600,99.398,112.164)
N9: (16.568,100.438,111.888)
O5': (14.535,103.599,111.448)
O3': (17.460,104.004,109.029)
OP1: (17.015,105.303,106.916)
OP2: (15.475,103.391,107.622)
C3': (18.157,101.638,103.382)
C1': (20.023,100.539,104.295)
C5': (17.349,102.481,105.553)
O4': (19.479,101.386,105.288)
C8: (18.579,98.720,105.349)
O2': (20.290,102.066,102.458)
C6: (20.243,95.675,104.721)
C5: (19.699,96.969,104.895)
C4: (20.407,98.027,104.353)
P: (16.823,103.991,107.569)
C4': (18.541,102.305,104.677)
C2': (19.472,101.033,102.952)
C2: (21.963,96.685,103.569)
N1: (21.396,95.570,104.037)
N3: (21.558,97.955,103.675)
N6: (19.683,94.555,105.194)
N7: (18.543,97.421,105.521)
N9: (19.683,99.157,104.648)
O5': (17.736,102.951,106.814)
O3': (17.675,102.613,102.474)
Image (generated by PyMOL):
PyMOL image
show in jmol