ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1217:A1218

Extra

PDB:
ATOM 1 O3' C A1216 12.942 104.264 113.314 1.00 44.40 O
ATOM 2 P G A1217 13.010 104.107 111.719 1.00 43.42 P
ATOM 3 OP1 G A1217 12.910 105.479 111.159 1.00 44.06 O
ATOM 4 OP2 G A1217 12.042 103.068 111.303 1.00 42.26 O
ATOM 5 O5' G A1217 14.499 103.624 111.455 1.00 42.92 O
ATOM 6 C5' G A1217 15.596 104.562 111.520 1.00 41.46 C
ATOM 7 C4' G A1217 16.900 103.839 111.323 1.00 41.20 C
ATOM 8 O4' G A1217 16.987 102.768 112.298 1.00 41.88 O
ATOM 9 C3' G A1217 16.979 103.145 109.980 1.00 40.88 C
ATOM 10 O3' G A1217 17.432 104.048 108.981 1.00 39.25 O
ATOM 11 C2' G A1217 17.898 101.960 110.245 1.00 41.73 C
ATOM 12 O2' G A1217 19.253 102.342 110.159 1.00 42.92 O
ATOM 13 C1' G A1217 17.525 101.599 111.693 1.00 42.07 C
ATOM 14 N9 G A1217 16.576 100.496 111.891 1.00 42.08 N
ATOM 15 C8 G A1217 15.201 100.584 111.936 1.00 42.00 C
ATOM 16 N7 G A1217 14.617 99.429 112.107 1.00 43.03 N
ATOM 17 C5 G A1217 15.663 98.519 112.186 1.00 43.02 C
ATOM 18 C6 G A1217 15.640 97.107 112.354 1.00 43.59 C
ATOM 19 O6 G A1217 14.654 96.354 112.438 1.00 45.14 O
ATOM 20 N1 G A1217 16.925 96.581 112.406 1.00 42.64 N
ATOM 21 C2 G A1217 18.081 97.313 112.298 1.00 42.70 C
ATOM 22 N2 G A1217 19.228 96.618 112.403 1.00 42.62 N
ATOM 23 N3 G A1217 18.116 98.625 112.111 1.00 41.95 N
ATOM 24 C4 G A1217 16.881 99.160 112.069 1.00 42.38 C
ATOM 25 P A A1218 16.796 103.975 107.514 1.00 39.81 P
ATOM 26 OP1 A A1218 16.937 105.292 106.828 1.00 39.17 O
ATOM 27 OP2 A A1218 15.467 103.319 107.588 1.00 39.32 O
ATOM 28 O5' A A1218 17.720 102.930 106.770 1.00 37.99 O
TER

ATOM 1 O3' G B1217 17.432 104.048 108.981 1.00 39.25 O
ATOM 2 P A B1218 16.796 103.975 107.514 1.00 39.81 P
ATOM 3 OP1 A B1218 16.937 105.292 106.828 1.00 39.17 O
ATOM 4 OP2 A B1218 15.467 103.319 107.588 1.00 39.32 O
ATOM 5 O5' A B1218 17.720 102.930 106.770 1.00 37.99 O
ATOM 6 C5' A B1218 17.322 102.410 105.517 1.00 35.41 C
ATOM 7 C4' A B1218 18.508 102.273 104.623 1.00 33.75 C
ATOM 8 O4' A B1218 19.473 101.394 105.250 1.00 33.42 O
ATOM 9 C3' A B1218 18.159 101.597 103.319 1.00 33.28 C
ATOM 10 O3' A B1218 17.657 102.575 102.407 1.00 34.35 O
ATOM 11 C2' A B1218 19.503 101.013 102.923 1.00 32.46 C
ATOM 12 O2' A B1218 20.358 102.029 102.454 1.00 30.86 O
ATOM 13 C1' A B1218 20.034 100.538 104.281 1.00 31.63 C
ATOM 14 N9 A B1218 19.692 99.161 104.656 1.00 32.94 N
ATOM 15 C8 A B1218 18.610 98.724 105.393 1.00 33.35 C
ATOM 16 N7 A B1218 18.586 97.427 105.575 1.00 32.48 N
ATOM 17 C5 A B1218 19.724 96.976 104.916 1.00 32.43 C
ATOM 18 C6 A B1218 20.269 95.690 104.736 1.00 32.32 C
ATOM 19 N6 A B1218 19.726 94.574 105.234 1.00 33.11 N
ATOM 20 N1 A B1218 21.407 95.586 104.018 1.00 31.61 N
ATOM 21 C2 A B1218 21.955 96.700 103.525 1.00 32.80 C
ATOM 22 N3 A B1218 21.542 97.963 103.632 1.00 33.07 N
ATOM 23 C4 A B1218 20.410 98.031 104.344 1.00 32.61 C
ATOM 24 P G B1219 16.395 102.242 101.459 1.00 35.48 P
ATOM 25 OP1 G B1219 15.874 103.557 101.018 1.00 35.10 O
ATOM 26 OP2 G B1219 15.465 101.248 102.044 1.00 35.09 O
ATOM 27 O5' G B1219 17.067 101.547 100.203 1.00 34.03 O
TER

Atoms:
OP1: (12.910,105.479,111.159)
OP2: (12.042,103.068,111.303)
C3': (16.979,103.145,109.980)
C1': (17.525,101.599,111.693)
C5': (15.596,104.562,111.520)
O6: (14.654,96.354,112.438)
O4': (16.987,102.768,112.298)
C8: (15.201,100.584,111.936)
C2: (18.081,97.313,112.298)
C6: (15.640,97.107,112.354)
C5: (15.663,98.519,112.186)
C4: (16.881,99.160,112.069)
P: (13.010,104.107,111.719)
C4': (16.900,103.839,111.323)
C2': (17.898,101.960,110.245)
O2': (19.253,102.342,110.159)
N1: (16.925,96.581,112.406)
N2: (19.228,96.618,112.403)
N3: (18.116,98.625,112.111)
N7: (14.617,99.429,112.107)
N9: (16.576,100.496,111.891)
O5': (14.499,103.624,111.455)
O3': (17.432,104.048,108.981)
OP1: (16.937,105.292,106.828)
OP2: (15.467,103.319,107.588)
C3': (18.159,101.597,103.319)
C1': (20.034,100.538,104.281)
C5': (17.322,102.410,105.517)
O4': (19.473,101.394,105.250)
C8: (18.610,98.724,105.393)
O2': (20.358,102.029,102.454)
C6: (20.269,95.690,104.736)
C5: (19.724,96.976,104.916)
C4: (20.410,98.031,104.344)
P: (16.796,103.975,107.514)
C4': (18.508,102.273,104.623)
C2': (19.503,101.013,102.923)
C2: (21.955,96.700,103.525)
N1: (21.407,95.586,104.018)
N3: (21.542,97.963,103.632)
N6: (19.726,94.574,105.234)
N7: (18.586,97.427,105.575)
N9: (19.692,99.161,104.656)
O5': (17.720,102.930,106.770)
O3': (17.657,102.575,102.407)
Image (generated by PyMOL):
PyMOL image
show in jmol