ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A1217:A1218

Extra

PDB:
ATOM 1 O3' C A1216 12.658 103.914 112.782 1.00 35.43 O
ATOM 2 P G A1217 12.755 103.713 111.194 1.00 34.03 P
ATOM 3 OP1 G A1217 12.649 105.054 110.571 1.00 32.14 O
ATOM 4 OP2 G A1217 11.854 102.620 110.761 1.00 30.81 O
ATOM 5 O5' G A1217 14.250 103.243 110.983 1.00 33.74 O
ATOM 6 C5' G A1217 15.332 104.168 111.137 1.00 33.18 C
ATOM 7 C4' G A1217 16.618 103.466 110.843 1.00 32.49 C
ATOM 8 O4' G A1217 16.757 102.369 111.778 1.00 33.10 O
ATOM 9 C3' G A1217 16.603 102.814 109.472 1.00 32.48 C
ATOM 10 O3' G A1217 17.039 103.749 108.489 1.00 32.61 O
ATOM 11 C2' G A1217 17.548 101.641 109.652 1.00 32.96 C
ATOM 12 O2' G A1217 18.886 102.072 109.548 1.00 35.04 O
ATOM 13 C1' G A1217 17.261 101.236 111.104 1.00 33.32 C
ATOM 14 N9 G A1217 16.300 100.154 111.269 1.00 34.07 N
ATOM 15 C8 G A1217 14.928 100.246 111.268 1.00 35.78 C
ATOM 16 N7 G A1217 14.338 99.101 111.473 1.00 35.99 N
ATOM 17 C5 G A1217 15.383 98.206 111.613 1.00 34.95 C
ATOM 18 C6 G A1217 15.366 96.822 111.867 1.00 37.05 C
ATOM 19 O6 G A1217 14.388 96.081 112.034 1.00 40.39 O
ATOM 20 N1 G A1217 16.657 96.300 111.934 1.00 36.43 N
ATOM 21 C2 G A1217 17.813 97.024 111.788 1.00 34.97 C
ATOM 22 N2 G A1217 18.969 96.346 111.911 1.00 33.30 N
ATOM 23 N3 G A1217 17.837 98.323 111.548 1.00 34.86 N
ATOM 24 C4 G A1217 16.598 98.843 111.477 1.00 34.26 C
ATOM 25 P A A1218 16.451 103.678 106.992 1.00 34.74 P
ATOM 26 OP1 A A1218 16.703 104.986 106.331 1.00 31.88 O
ATOM 27 OP2 A A1218 15.072 103.114 107.017 1.00 35.16 O
ATOM 28 O5' A A1218 17.349 102.596 106.258 1.00 33.04 O
TER

ATOM 1 O3' G B1217 17.039 103.749 108.489 1.00 32.61 O
ATOM 2 P A B1218 16.451 103.678 106.992 1.00 34.74 P
ATOM 3 OP1 A B1218 16.703 104.986 106.331 1.00 31.88 O
ATOM 4 OP2 A B1218 15.072 103.114 107.017 1.00 35.16 O
ATOM 5 O5' A B1218 17.349 102.596 106.258 1.00 33.04 O
ATOM 6 C5' A B1218 16.950 102.118 104.973 1.00 30.79 C
ATOM 7 C4' A B1218 18.140 101.999 104.065 1.00 29.05 C
ATOM 8 O4' A B1218 19.131 101.144 104.673 1.00 27.98 O
ATOM 9 C3' A B1218 17.811 101.335 102.745 1.00 28.88 C
ATOM 10 O3' A B1218 17.379 102.312 101.809 1.00 29.45 O
ATOM 11 C2' A B1218 19.140 100.740 102.342 1.00 28.38 C
ATOM 12 O2' A B1218 19.962 101.760 101.825 1.00 30.12 O
ATOM 13 C1' A B1218 19.690 100.296 103.695 1.00 26.86 C
ATOM 14 N9 A B1218 19.365 98.924 104.067 1.00 26.62 N
ATOM 15 C8 A B1218 18.315 98.498 104.841 1.00 27.52 C
ATOM 16 N7 A B1218 18.308 97.205 105.054 1.00 28.24 N
ATOM 17 C5 A B1218 19.420 96.749 104.364 1.00 25.95 C
ATOM 18 C6 A B1218 19.960 95.472 104.202 1.00 25.31 C
ATOM 19 N6 A B1218 19.444 94.377 104.766 1.00 24.62 N
ATOM 20 N1 A B1218 21.066 95.352 103.438 1.00 26.15 N
ATOM 21 C2 A B1218 21.586 96.454 102.886 1.00 26.39 C
ATOM 22 N3 A B1218 21.170 97.717 102.974 1.00 26.20 N
ATOM 23 C4 A B1218 20.070 97.796 103.738 1.00 26.20 C
ATOM 24 P G B1219 16.165 101.985 100.825 1.00 30.06 P
ATOM 25 OP1 G B1219 15.537 103.271 100.422 1.00 29.35 O
ATOM 26 OP2 G B1219 15.361 100.938 101.446 1.00 29.03 O
ATOM 27 O5' G B1219 16.846 101.339 99.548 1.00 29.15 O
TER

Atoms:
OP1: (12.649,105.054,110.571)
OP2: (11.854,102.620,110.761)
C3': (16.603,102.814,109.472)
C1': (17.261,101.236,111.104)
C5': (15.332,104.168,111.137)
O6: (14.388,96.081,112.034)
O4': (16.757,102.369,111.778)
C8: (14.928,100.246,111.268)
C2: (17.813,97.024,111.788)
C6: (15.366,96.822,111.867)
C5: (15.383,98.206,111.613)
C4: (16.598,98.843,111.477)
P: (12.755,103.713,111.194)
C4': (16.618,103.466,110.843)
C2': (17.548,101.641,109.652)
O2': (18.886,102.072,109.548)
N1: (16.657,96.300,111.934)
N2: (18.969,96.346,111.911)
N3: (17.837,98.323,111.548)
N7: (14.338,99.101,111.473)
N9: (16.300,100.154,111.269)
O5': (14.250,103.243,110.983)
O3': (17.039,103.749,108.489)
OP1: (16.703,104.986,106.331)
OP2: (15.072,103.114,107.017)
C3': (17.811,101.335,102.745)
C1': (19.690,100.296,103.695)
C5': (16.950,102.118,104.973)
O4': (19.131,101.144,104.673)
C8: (18.315,98.498,104.841)
O2': (19.962,101.760,101.825)
C6: (19.960,95.472,104.202)
C5: (19.420,96.749,104.364)
C4: (20.070,97.796,103.738)
P: (16.451,103.678,106.992)
C4': (18.140,101.999,104.065)
C2': (19.140,100.740,102.342)
C2: (21.586,96.454,102.886)
N1: (21.066,95.352,103.438)
N3: (21.170,97.717,102.974)
N6: (19.444,94.377,104.766)
N7: (18.308,97.205,105.054)
N9: (19.365,98.924,104.067)
O5': (17.349,102.596,106.258)
O3': (17.379,102.312,101.809)
Image (generated by PyMOL):
PyMOL image
show in jmol