ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q86:A1217:A1218

Extra

PDB:
ATOM 1 O3' C A1216 12.817 104.069 113.180 1.00 42.32 O
ATOM 2 P G A1217 12.812 103.864 111.588 1.00 40.80 P
ATOM 3 OP1 G A1217 12.597 105.224 111.046 1.00 39.91 O
ATOM 4 OP2 G A1217 11.909 102.755 111.179 1.00 39.35 O
ATOM 5 O5' G A1217 14.305 103.437 111.250 1.00 42.38 O
ATOM 6 C5' G A1217 15.401 104.360 111.421 1.00 41.55 C
ATOM 7 C4' G A1217 16.705 103.658 111.140 1.00 41.03 C
ATOM 8 O4' G A1217 16.886 102.588 112.102 1.00 41.74 O
ATOM 9 C3' G A1217 16.735 102.978 109.784 1.00 40.50 C
ATOM 10 O3' G A1217 17.144 103.905 108.788 1.00 39.06 O
ATOM 11 C2' G A1217 17.707 101.823 109.996 1.00 40.46 C
ATOM 12 O2' G A1217 19.058 102.208 109.864 1.00 40.79 O
ATOM 13 C1' G A1217 17.414 101.442 111.454 1.00 41.34 C
ATOM 14 N9 G A1217 16.455 100.355 111.634 1.00 42.28 N
ATOM 15 C8 G A1217 15.085 100.460 111.655 1.00 42.55 C
ATOM 16 N7 G A1217 14.487 99.319 111.857 1.00 42.83 N
ATOM 17 C5 G A1217 15.522 98.405 111.971 1.00 42.68 C
ATOM 18 C6 G A1217 15.486 97.013 112.202 1.00 43.62 C
ATOM 19 O6 G A1217 14.497 96.288 112.357 1.00 47.84 O
ATOM 20 N1 G A1217 16.767 96.468 112.250 1.00 42.01 N
ATOM 21 C2 G A1217 17.932 97.176 112.097 1.00 41.16 C
ATOM 22 N2 G A1217 19.068 96.476 112.176 1.00 37.94 N
ATOM 23 N3 G A1217 17.978 98.479 111.883 1.00 42.97 N
ATOM 24 C4 G A1217 16.744 99.026 111.833 1.00 42.87 C
ATOM 25 P A A1218 16.492 103.847 107.321 1.00 39.67 P
ATOM 26 OP1 A A1218 16.604 105.205 106.736 1.00 37.50 O
ATOM 27 OP2 A A1218 15.158 103.191 107.399 1.00 41.07 O
ATOM 28 O5' A A1218 17.466 102.877 106.523 1.00 38.30 O
TER

ATOM 1 O3' G B1217 17.144 103.905 108.788 1.00 39.06 O
ATOM 2 P A B1218 16.492 103.847 107.321 1.00 39.67 P
ATOM 3 OP1 A B1218 16.604 105.205 106.736 1.00 37.50 O
ATOM 4 OP2 A B1218 15.158 103.191 107.399 1.00 41.07 O
ATOM 5 O5' A B1218 17.466 102.877 106.523 1.00 38.30 O
ATOM 6 C5' A B1218 17.070 102.319 105.269 1.00 36.66 C
ATOM 7 C4' A B1218 18.264 102.171 104.359 1.00 34.74 C
ATOM 8 O4' A B1218 19.251 101.306 104.968 1.00 33.85 O
ATOM 9 C3' A B1218 17.940 101.494 103.046 1.00 34.43 C
ATOM 10 O3' A B1218 17.435 102.451 102.130 1.00 34.30 O
ATOM 11 C2' A B1218 19.286 100.931 102.637 1.00 34.13 C
ATOM 12 O2' A B1218 20.138 101.946 102.163 1.00 34.93 O
ATOM 13 C1' A B1218 19.824 100.464 103.985 1.00 32.49 C
ATOM 14 N9 A B1218 19.496 99.081 104.328 1.00 31.72 N
ATOM 15 C8 A B1218 18.455 98.641 105.105 1.00 31.84 C
ATOM 16 N7 A B1218 18.449 97.346 105.299 1.00 31.76 N
ATOM 17 C5 A B1218 19.550 96.897 104.588 1.00 31.07 C
ATOM 18 C6 A B1218 20.093 95.614 104.403 1.00 29.93 C
ATOM 19 N6 A B1218 19.597 94.511 104.967 1.00 26.89 N
ATOM 20 N1 A B1218 21.185 95.502 103.618 1.00 31.59 N
ATOM 21 C2 A B1218 21.699 96.616 103.077 1.00 33.89 C
ATOM 22 N3 A B1218 21.288 97.882 103.193 1.00 32.85 N
ATOM 23 C4 A B1218 20.195 97.953 103.970 1.00 31.99 C
ATOM 24 P G B1219 16.169 102.087 101.217 1.00 34.75 P
ATOM 25 OP1 G B1219 15.518 103.378 100.896 1.00 36.08 O
ATOM 26 OP2 G B1219 15.387 101.019 101.898 1.00 34.85 O
ATOM 27 O5' G B1219 16.834 101.493 99.900 1.00 32.84 O
TER

Atoms:
OP1: (12.597,105.224,111.046)
OP2: (11.909,102.755,111.179)
C3': (16.735,102.978,109.784)
C1': (17.414,101.442,111.454)
C5': (15.401,104.360,111.421)
O6: (14.497,96.288,112.357)
O4': (16.886,102.588,112.102)
C8: (15.085,100.460,111.655)
C2: (17.932,97.176,112.097)
C6: (15.486,97.013,112.202)
C5: (15.522,98.405,111.971)
C4: (16.744,99.026,111.833)
P: (12.812,103.864,111.588)
C4': (16.705,103.658,111.140)
C2': (17.707,101.823,109.996)
O2': (19.058,102.208,109.864)
N1: (16.767,96.468,112.250)
N2: (19.068,96.476,112.176)
N3: (17.978,98.479,111.883)
N7: (14.487,99.319,111.857)
N9: (16.455,100.355,111.634)
O5': (14.305,103.437,111.250)
O3': (17.144,103.905,108.788)
OP1: (16.604,105.205,106.736)
OP2: (15.158,103.191,107.399)
C3': (17.940,101.494,103.046)
C1': (19.824,100.464,103.985)
C5': (17.070,102.319,105.269)
O4': (19.251,101.306,104.968)
C8: (18.455,98.641,105.105)
O2': (20.138,101.946,102.163)
C6: (20.093,95.614,104.403)
C5: (19.550,96.897,104.588)
C4: (20.195,97.953,103.970)
P: (16.492,103.847,107.321)
C4': (18.264,102.171,104.359)
C2': (19.286,100.931,102.637)
C2: (21.699,96.616,103.077)
N1: (21.185,95.502,103.618)
N3: (21.288,97.882,103.193)
N6: (19.597,94.511,104.967)
N7: (18.449,97.346,105.299)
N9: (19.496,99.081,104.328)
O5': (17.466,102.877,106.523)
O3': (17.435,102.451,102.130)
Image (generated by PyMOL):
PyMOL image
show in jmol