ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:0519:0520

Extra

PDB:
ATOM 1 O3' C A 518 17.246 136.693 103.617 1.00 52.11 O
ATOM 2 P G A 519 17.002 137.743 104.810 1.00 54.99 P
ATOM 3 OP1 G A 519 16.758 136.895 106.011 1.00 53.55 O
ATOM 4 OP2 G A 519 16.020 138.783 104.414 1.00 52.37 O
ATOM 5 O5' G A 519 18.387 138.511 105.000 1.00 53.66 O
ATOM 6 C5' G A 519 19.579 137.812 105.375 1.00 52.11 C
ATOM 7 C4' G A 519 20.769 138.697 105.166 1.00 51.63 C
ATOM 8 O4' G A 519 20.763 139.166 103.798 1.00 53.63 O
ATOM 9 C3' G A 519 20.757 139.963 105.986 1.00 51.58 C
ATOM 10 O3' G A 519 21.288 139.699 107.275 1.00 50.04 O
ATOM 11 C2' G A 519 21.625 140.900 105.158 1.00 52.88 C
ATOM 12 O2' G A 519 23.006 140.675 105.321 1.00 52.22 O
ATOM 13 C1' G A 519 21.221 140.501 103.740 1.00 54.02 C
ATOM 14 N9 G A 519 20.150 141.329 103.193 1.00 57.32 N
ATOM 15 C8 G A 519 18.795 141.063 103.171 1.00 56.91 C
ATOM 16 N7 G A 519 18.094 142.025 102.633 1.00 56.74 N
ATOM 17 C5 G A 519 19.038 142.978 102.275 1.00 58.02 C
ATOM 18 C6 G A 519 18.877 144.251 101.679 1.00 59.31 C
ATOM 19 O6 G A 519 17.834 144.819 101.348 1.00 62.62 O
ATOM 20 N1 G A 519 20.098 144.886 101.489 1.00 59.32 N
ATOM 21 C2 G A 519 21.323 144.370 101.839 1.00 58.37 C
ATOM 22 N2 G A 519 22.385 145.124 101.556 1.00 57.94 N
ATOM 23 N3 G A 519 21.489 143.198 102.416 1.00 58.50 N
ATOM 24 C4 G A 519 20.311 142.558 102.603 1.00 58.44 C
ATOM 25 P A A 520 21.024 140.729 108.477 1.00 48.98 P
ATOM 26 OP1 A A 520 20.745 139.885 109.674 1.00 46.38 O
ATOM 27 OP2 A A 520 20.028 141.727 108.016 1.00 49.28 O
ATOM 28 O5' A A 520 22.415 141.481 108.662 1.00 48.53 O
TER

ATOM 1 O3' G B 519 21.288 139.699 107.275 1.00 50.04 O
ATOM 2 P A B 520 21.024 140.729 108.477 1.00 48.98 P
ATOM 3 OP1 A B 520 20.745 139.885 109.674 1.00 46.38 O
ATOM 4 OP2 A B 520 20.028 141.727 108.016 1.00 49.28 O
ATOM 5 O5' A B 520 22.415 141.481 108.662 1.00 48.53 O
ATOM 6 C5' A B 520 23.662 140.757 108.515 1.00 48.82 C
ATOM 7 C4' A B 520 24.828 141.612 108.918 1.00 46.57 C
ATOM 8 O4' A B 520 24.984 142.702 107.993 1.00 47.24 O
ATOM 9 C3' A B 520 24.660 142.278 110.257 1.00 45.43 C
ATOM 10 O3' A B 520 25.070 141.344 111.223 1.00 44.65 O
ATOM 11 C2' A B 520 25.596 143.474 110.164 1.00 46.81 C
ATOM 12 O2' A B 520 26.936 143.171 110.472 1.00 47.35 O
ATOM 13 C1' A B 520 25.504 143.818 108.676 1.00 48.12 C
ATOM 14 N9 A B 520 24.709 144.992 108.322 1.00 50.77 N
ATOM 15 C8 A B 520 23.411 145.065 107.880 1.00 51.24 C
ATOM 16 N7 A B 520 23.022 146.280 107.586 1.00 51.10 N
ATOM 17 C5 A B 520 24.134 147.058 107.859 1.00 51.81 C
ATOM 18 C6 A B 520 24.382 148.429 107.736 1.00 52.47 C
ATOM 19 N6 A B 520 23.505 149.303 107.256 1.00 52.32 N
ATOM 20 N1 A B 520 25.593 148.884 108.122 1.00 53.33 N
ATOM 21 C2 A B 520 26.487 148.014 108.582 1.00 52.33 C
ATOM 22 N3 A B 520 26.381 146.701 108.724 1.00 52.30 N
ATOM 23 C4 A B 520 25.168 146.281 108.338 1.00 51.71 C
ATOM 24 P U B 521 24.086 140.955 112.405 1.00 42.95 P
ATOM 25 OP1 U B 521 22.742 140.842 111.808 1.00 42.58 O
ATOM 26 OP2 U B 521 24.354 141.967 113.433 1.00 43.25 O
ATOM 27 O5' U B 521 24.578 139.535 112.921 1.00 39.94 O
TER

Atoms:
OP1: (16.758,136.895,106.011)
OP2: (16.020,138.783,104.414)
C3': (20.757,139.963,105.986)
C1': (21.221,140.501,103.740)
C5': (19.579,137.812,105.375)
O6: (17.834,144.819,101.348)
O4': (20.763,139.166,103.798)
C8: (18.795,141.063,103.171)
C2: (21.323,144.370,101.839)
C6: (18.877,144.251,101.679)
C5: (19.038,142.978,102.275)
C4: (20.311,142.558,102.603)
P: (17.002,137.743,104.810)
C4': (20.769,138.697,105.166)
C2': (21.625,140.900,105.158)
O2': (23.006,140.675,105.321)
N1: (20.098,144.886,101.489)
N2: (22.385,145.124,101.556)
N3: (21.489,143.198,102.416)
N7: (18.094,142.025,102.633)
N9: (20.150,141.329,103.193)
O5': (18.387,138.511,105.000)
O3': (21.288,139.699,107.275)
OP1: (20.745,139.885,109.674)
OP2: (20.028,141.727,108.016)
C3': (24.660,142.278,110.257)
C1': (25.504,143.818,108.676)
C5': (23.662,140.757,108.515)
O4': (24.984,142.702,107.993)
C8: (23.411,145.065,107.880)
O2': (26.936,143.171,110.472)
C6: (24.382,148.429,107.736)
C5: (24.134,147.058,107.859)
C4: (25.168,146.281,108.338)
P: (21.024,140.729,108.477)
C4': (24.828,141.612,108.918)
C2': (25.596,143.474,110.164)
C2: (26.487,148.014,108.582)
N1: (25.593,148.884,108.122)
N3: (26.381,146.701,108.724)
N6: (23.505,149.303,107.256)
N7: (23.022,146.280,107.586)
N9: (24.709,144.992,108.322)
O5': (22.415,141.481,108.662)
O3': (25.070,141.344,111.223)
Image (generated by PyMOL):
PyMOL image
show in jmol