Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0519:0520
Extra
PDB:
ATOM 1 O3' C A 518 16.566 136.254 103.723 1.00 56.18 O
ATOM 2 P G A 519 16.297 137.288 104.921 1.00 58.01 P
ATOM 3 OP1 G A 519 16.081 136.461 106.138 1.00 59.66 O
ATOM 4 OP2 G A 519 15.272 138.280 104.511 1.00 56.10 O
ATOM 5 O5' G A 519 17.671 138.066 105.101 1.00 56.16 O
ATOM 6 C5' G A 519 18.869 137.377 105.476 1.00 53.81 C
ATOM 7 C4' G A 519 20.054 138.287 105.300 1.00 53.07 C
ATOM 8 O4' G A 519 20.089 138.758 103.923 1.00 53.03 O
ATOM 9 C3' G A 519 19.998 139.561 106.120 1.00 51.79 C
ATOM 10 O3' G A 519 20.463 139.335 107.444 1.00 50.74 O
ATOM 11 C2' G A 519 20.891 140.504 105.324 1.00 54.02 C
ATOM 12 O2' G A 519 22.272 140.306 105.550 1.00 53.46 O
ATOM 13 C1' G A 519 20.547 140.097 103.890 1.00 53.69 C
ATOM 14 N9 G A 519 19.506 140.933 103.305 1.00 55.29 N
ATOM 15 C8 G A 519 18.165 140.658 103.193 1.00 56.11 C
ATOM 16 N7 G A 519 17.493 141.618 102.618 1.00 56.32 N
ATOM 17 C5 G A 519 18.449 142.581 102.332 1.00 57.19 C
ATOM 18 C6 G A 519 18.324 143.841 101.705 1.00 58.15 C
ATOM 19 O6 G A 519 17.314 144.375 101.244 1.00 62.21 O
ATOM 20 N1 G A 519 19.545 144.497 101.628 1.00 57.88 N
ATOM 21 C2 G A 519 20.737 143.998 102.078 1.00 57.05 C
ATOM 22 N2 G A 519 21.813 144.774 101.893 1.00 58.16 N
ATOM 23 N3 G A 519 20.870 142.823 102.660 1.00 56.55 N
ATOM 24 C4 G A 519 19.694 142.173 102.753 1.00 56.58 C
ATOM 25 P A A 520 20.349 140.503 108.540 1.00 48.48 P
ATOM 26 OP1 A A 520 20.101 139.878 109.861 1.00 49.11 O
ATOM 27 OP2 A A 520 19.398 141.496 108.016 1.00 50.93 O
ATOM 28 O5' A A 520 21.791 141.172 108.546 1.00 48.23 O
TER
ATOM 1 O3' G B 519 20.463 139.335 107.444 1.00 50.74 O
ATOM 2 P A B 520 20.349 140.503 108.540 1.00 48.48 P
ATOM 3 OP1 A B 520 20.101 139.878 109.861 1.00 49.11 O
ATOM 4 OP2 A B 520 19.398 141.496 108.016 1.00 50.93 O
ATOM 5 O5' A B 520 21.791 141.172 108.546 1.00 48.23 O
ATOM 6 C5' A B 520 22.977 140.368 108.618 1.00 45.28 C
ATOM 7 C4' A B 520 24.127 141.194 109.125 1.00 46.28 C
ATOM 8 O4' A B 520 24.351 142.315 108.236 1.00 45.13 O
ATOM 9 C3' A B 520 23.903 141.835 110.483 1.00 46.21 C
ATOM 10 O3' A B 520 24.286 140.901 111.476 1.00 48.19 O
ATOM 11 C2' A B 520 24.881 143.006 110.461 1.00 46.94 C
ATOM 12 O2' A B 520 26.197 142.625 110.798 1.00 48.87 O
ATOM 13 C1' A B 520 24.865 143.402 108.981 1.00 45.60 C
ATOM 14 N9 A B 520 24.097 144.597 108.651 1.00 44.89 N
ATOM 15 C8 A B 520 22.763 144.693 108.365 1.00 43.85 C
ATOM 16 N7 A B 520 22.378 145.901 108.047 1.00 44.51 N
ATOM 17 C5 A B 520 23.535 146.655 108.138 1.00 45.88 C
ATOM 18 C6 A B 520 23.799 148.009 107.898 1.00 46.96 C
ATOM 19 N6 A B 520 22.877 148.879 107.488 1.00 47.66 N
ATOM 20 N1 A B 520 25.065 148.447 108.091 1.00 47.50 N
ATOM 21 C2 A B 520 25.990 147.571 108.492 1.00 44.60 C
ATOM 22 N3 A B 520 25.865 146.273 108.737 1.00 45.72 N
ATOM 23 C4 A B 520 24.598 145.870 108.535 1.00 46.12 C
ATOM 24 P U B 521 23.273 140.498 112.651 1.00 49.30 P
ATOM 25 OP1 U B 521 21.924 140.236 112.085 1.00 46.92 O
ATOM 26 OP2 U B 521 23.445 141.529 113.705 1.00 46.58 O
ATOM 27 O5' U B 521 23.870 139.115 113.172 1.00 46.60 O
TER
ATOM 2 P G A 519 16.297 137.288 104.921 1.00 58.01 P
ATOM 3 OP1 G A 519 16.081 136.461 106.138 1.00 59.66 O
ATOM 4 OP2 G A 519 15.272 138.280 104.511 1.00 56.10 O
ATOM 5 O5' G A 519 17.671 138.066 105.101 1.00 56.16 O
ATOM 6 C5' G A 519 18.869 137.377 105.476 1.00 53.81 C
ATOM 7 C4' G A 519 20.054 138.287 105.300 1.00 53.07 C
ATOM 8 O4' G A 519 20.089 138.758 103.923 1.00 53.03 O
ATOM 9 C3' G A 519 19.998 139.561 106.120 1.00 51.79 C
ATOM 10 O3' G A 519 20.463 139.335 107.444 1.00 50.74 O
ATOM 11 C2' G A 519 20.891 140.504 105.324 1.00 54.02 C
ATOM 12 O2' G A 519 22.272 140.306 105.550 1.00 53.46 O
ATOM 13 C1' G A 519 20.547 140.097 103.890 1.00 53.69 C
ATOM 14 N9 G A 519 19.506 140.933 103.305 1.00 55.29 N
ATOM 15 C8 G A 519 18.165 140.658 103.193 1.00 56.11 C
ATOM 16 N7 G A 519 17.493 141.618 102.618 1.00 56.32 N
ATOM 17 C5 G A 519 18.449 142.581 102.332 1.00 57.19 C
ATOM 18 C6 G A 519 18.324 143.841 101.705 1.00 58.15 C
ATOM 19 O6 G A 519 17.314 144.375 101.244 1.00 62.21 O
ATOM 20 N1 G A 519 19.545 144.497 101.628 1.00 57.88 N
ATOM 21 C2 G A 519 20.737 143.998 102.078 1.00 57.05 C
ATOM 22 N2 G A 519 21.813 144.774 101.893 1.00 58.16 N
ATOM 23 N3 G A 519 20.870 142.823 102.660 1.00 56.55 N
ATOM 24 C4 G A 519 19.694 142.173 102.753 1.00 56.58 C
ATOM 25 P A A 520 20.349 140.503 108.540 1.00 48.48 P
ATOM 26 OP1 A A 520 20.101 139.878 109.861 1.00 49.11 O
ATOM 27 OP2 A A 520 19.398 141.496 108.016 1.00 50.93 O
ATOM 28 O5' A A 520 21.791 141.172 108.546 1.00 48.23 O
TER
ATOM 1 O3' G B 519 20.463 139.335 107.444 1.00 50.74 O
ATOM 2 P A B 520 20.349 140.503 108.540 1.00 48.48 P
ATOM 3 OP1 A B 520 20.101 139.878 109.861 1.00 49.11 O
ATOM 4 OP2 A B 520 19.398 141.496 108.016 1.00 50.93 O
ATOM 5 O5' A B 520 21.791 141.172 108.546 1.00 48.23 O
ATOM 6 C5' A B 520 22.977 140.368 108.618 1.00 45.28 C
ATOM 7 C4' A B 520 24.127 141.194 109.125 1.00 46.28 C
ATOM 8 O4' A B 520 24.351 142.315 108.236 1.00 45.13 O
ATOM 9 C3' A B 520 23.903 141.835 110.483 1.00 46.21 C
ATOM 10 O3' A B 520 24.286 140.901 111.476 1.00 48.19 O
ATOM 11 C2' A B 520 24.881 143.006 110.461 1.00 46.94 C
ATOM 12 O2' A B 520 26.197 142.625 110.798 1.00 48.87 O
ATOM 13 C1' A B 520 24.865 143.402 108.981 1.00 45.60 C
ATOM 14 N9 A B 520 24.097 144.597 108.651 1.00 44.89 N
ATOM 15 C8 A B 520 22.763 144.693 108.365 1.00 43.85 C
ATOM 16 N7 A B 520 22.378 145.901 108.047 1.00 44.51 N
ATOM 17 C5 A B 520 23.535 146.655 108.138 1.00 45.88 C
ATOM 18 C6 A B 520 23.799 148.009 107.898 1.00 46.96 C
ATOM 19 N6 A B 520 22.877 148.879 107.488 1.00 47.66 N
ATOM 20 N1 A B 520 25.065 148.447 108.091 1.00 47.50 N
ATOM 21 C2 A B 520 25.990 147.571 108.492 1.00 44.60 C
ATOM 22 N3 A B 520 25.865 146.273 108.737 1.00 45.72 N
ATOM 23 C4 A B 520 24.598 145.870 108.535 1.00 46.12 C
ATOM 24 P U B 521 23.273 140.498 112.651 1.00 49.30 P
ATOM 25 OP1 U B 521 21.924 140.236 112.085 1.00 46.92 O
ATOM 26 OP2 U B 521 23.445 141.529 113.705 1.00 46.58 O
ATOM 27 O5' U B 521 23.870 139.115 113.172 1.00 46.60 O
TER
Atoms:
OP1: (16.081,136.461,106.138)
OP2: (15.272,138.280,104.511)
C3': (19.998,139.561,106.120)
C1': (20.547,140.097,103.890)
C5': (18.869,137.377,105.476)
O6: (17.314,144.375,101.244)
O4': (20.089,138.758,103.923)
C8: (18.165,140.658,103.193)
C2: (20.737,143.998,102.078)
C6: (18.324,143.841,101.705)
C5: (18.449,142.581,102.332)
C4: (19.694,142.173,102.753)
P: (16.297,137.288,104.921)
C4': (20.054,138.287,105.300)
C2': (20.891,140.504,105.324)
O2': (22.272,140.306,105.550)
N1: (19.545,144.497,101.628)
N2: (21.813,144.774,101.893)
N3: (20.870,142.823,102.660)
N7: (17.493,141.618,102.618)
N9: (19.506,140.933,103.305)
O5': (17.671,138.066,105.101)
O3': (20.463,139.335,107.444)
OP2: (15.272,138.280,104.511)
C3': (19.998,139.561,106.120)
C1': (20.547,140.097,103.890)
C5': (18.869,137.377,105.476)
O6: (17.314,144.375,101.244)
O4': (20.089,138.758,103.923)
C8: (18.165,140.658,103.193)
C2: (20.737,143.998,102.078)
C6: (18.324,143.841,101.705)
C5: (18.449,142.581,102.332)
C4: (19.694,142.173,102.753)
P: (16.297,137.288,104.921)
C4': (20.054,138.287,105.300)
C2': (20.891,140.504,105.324)
O2': (22.272,140.306,105.550)
N1: (19.545,144.497,101.628)
N2: (21.813,144.774,101.893)
N3: (20.870,142.823,102.660)
N7: (17.493,141.618,102.618)
N9: (19.506,140.933,103.305)
O5': (17.671,138.066,105.101)
O3': (20.463,139.335,107.444)
OP1: (20.101,139.878,109.861)
OP2: (19.398,141.496,108.016)
C3': (23.903,141.835,110.483)
C1': (24.865,143.402,108.981)
C5': (22.977,140.368,108.618)
O4': (24.351,142.315,108.236)
C8: (22.763,144.693,108.365)
O2': (26.197,142.625,110.798)
C6: (23.799,148.009,107.898)
C5: (23.535,146.655,108.138)
C4: (24.598,145.870,108.535)
P: (20.349,140.503,108.540)
C4': (24.127,141.194,109.125)
C2': (24.881,143.006,110.461)
C2: (25.990,147.571,108.492)
N1: (25.065,148.447,108.091)
N3: (25.865,146.273,108.737)
N6: (22.877,148.879,107.488)
N7: (22.378,145.901,108.047)
N9: (24.097,144.597,108.651)
O5': (21.791,141.172,108.546)
O3': (24.286,140.901,111.476)
OP2: (19.398,141.496,108.016)
C3': (23.903,141.835,110.483)
C1': (24.865,143.402,108.981)
C5': (22.977,140.368,108.618)
O4': (24.351,142.315,108.236)
C8: (22.763,144.693,108.365)
O2': (26.197,142.625,110.798)
C6: (23.799,148.009,107.898)
C5: (23.535,146.655,108.138)
C4: (24.598,145.870,108.535)
P: (20.349,140.503,108.540)
C4': (24.127,141.194,109.125)
C2': (24.881,143.006,110.461)
C2: (25.990,147.571,108.492)
N1: (25.065,148.447,108.091)
N3: (25.865,146.273,108.737)
N6: (22.877,148.879,107.488)
N7: (22.378,145.901,108.047)
N9: (24.097,144.597,108.651)
O5': (21.791,141.172,108.546)
O3': (24.286,140.901,111.476)
Image (generated by PyMOL):