Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0519:0520
Extra
PDB:
ATOM 1 O3' C A 518 16.962 135.163 103.608 1.00 43.13 O
ATOM 2 P G A 519 16.756 136.216 104.809 1.00 45.76 P
ATOM 3 OP1 G A 519 16.560 135.400 106.038 1.00 46.92 O
ATOM 4 OP2 G A 519 15.739 137.225 104.425 1.00 44.44 O
ATOM 5 O5' G A 519 18.145 136.993 104.923 1.00 47.31 O
ATOM 6 C5' G A 519 19.373 136.304 105.242 1.00 45.96 C
ATOM 7 C4' G A 519 20.548 137.247 105.102 1.00 45.82 C
ATOM 8 O4' G A 519 20.628 137.718 103.727 1.00 44.85 O
ATOM 9 C3' G A 519 20.481 138.530 105.919 1.00 45.37 C
ATOM 10 O3' G A 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 11 C2' G A 519 21.425 139.447 105.150 1.00 45.01 C
ATOM 12 O2' G A 519 22.791 139.175 105.407 1.00 45.44 O
ATOM 13 C1' G A 519 21.098 139.061 103.707 1.00 44.34 C
ATOM 14 N9 G A 519 20.054 139.911 103.144 1.00 43.58 N
ATOM 15 C8 G A 519 18.705 139.647 103.086 1.00 43.99 C
ATOM 16 N7 G A 519 18.016 140.618 102.548 1.00 44.74 N
ATOM 17 C5 G A 519 18.966 141.576 102.224 1.00 43.39 C
ATOM 18 C6 G A 519 18.817 142.845 101.611 1.00 43.43 C
ATOM 19 O6 G A 519 17.779 143.392 101.219 1.00 44.78 O
ATOM 20 N1 G A 519 20.041 143.491 101.464 1.00 41.85 N
ATOM 21 C2 G A 519 21.253 142.978 101.844 1.00 42.83 C
ATOM 22 N2 G A 519 22.326 143.749 101.598 1.00 42.59 N
ATOM 23 N3 G A 519 21.407 141.794 102.418 1.00 43.27 N
ATOM 24 C4 G A 519 20.230 141.153 102.577 1.00 43.42 C
ATOM 25 P A A 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 26 OP1 A A 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 27 OP2 A A 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 28 O5' A A 520 22.144 140.131 108.519 1.00 43.09 O
TER
ATOM 1 O3' G B 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 2 P A B 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 3 OP1 A B 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 4 OP2 A B 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 5 O5' A B 520 22.144 140.131 108.519 1.00 43.09 O
ATOM 6 C5' A B 520 23.316 139.325 108.763 1.00 40.52 C
ATOM 7 C4' A B 520 24.452 140.204 109.244 1.00 40.56 C
ATOM 8 O4' A B 520 24.646 141.279 108.289 1.00 41.35 O
ATOM 9 C3' A B 520 24.200 140.938 110.556 1.00 40.11 C
ATOM 10 O3' A B 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 11 C2' A B 520 25.152 142.127 110.465 1.00 40.40 C
ATOM 12 O2' A B 520 26.466 141.791 110.863 1.00 41.50 O
ATOM 13 C1' A B 520 25.150 142.419 108.963 1.00 39.85 C
ATOM 14 N9 A B 520 24.374 143.584 108.554 1.00 39.18 N
ATOM 15 C8 A B 520 23.066 143.628 108.141 1.00 39.69 C
ATOM 16 N7 A B 520 22.660 144.829 107.804 1.00 40.18 N
ATOM 17 C5 A B 520 23.775 145.629 108.011 1.00 40.40 C
ATOM 18 C6 A B 520 24.003 147.001 107.820 1.00 40.17 C
ATOM 19 N6 A B 520 23.086 147.845 107.344 1.00 42.01 N
ATOM 20 N1 A B 520 25.225 147.484 108.130 1.00 38.63 N
ATOM 21 C2 A B 520 26.149 146.639 108.593 1.00 37.93 C
ATOM 22 N3 A B 520 26.060 145.331 108.806 1.00 39.73 N
ATOM 23 C4 A B 520 24.833 144.879 108.489 1.00 39.95 C
ATOM 24 P U B 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 25 OP1 U B 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 26 OP2 U B 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 27 O5' U B 521 24.163 138.194 113.171 1.00 40.72 O
TER
ATOM 2 P G A 519 16.756 136.216 104.809 1.00 45.76 P
ATOM 3 OP1 G A 519 16.560 135.400 106.038 1.00 46.92 O
ATOM 4 OP2 G A 519 15.739 137.225 104.425 1.00 44.44 O
ATOM 5 O5' G A 519 18.145 136.993 104.923 1.00 47.31 O
ATOM 6 C5' G A 519 19.373 136.304 105.242 1.00 45.96 C
ATOM 7 C4' G A 519 20.548 137.247 105.102 1.00 45.82 C
ATOM 8 O4' G A 519 20.628 137.718 103.727 1.00 44.85 O
ATOM 9 C3' G A 519 20.481 138.530 105.919 1.00 45.37 C
ATOM 10 O3' G A 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 11 C2' G A 519 21.425 139.447 105.150 1.00 45.01 C
ATOM 12 O2' G A 519 22.791 139.175 105.407 1.00 45.44 O
ATOM 13 C1' G A 519 21.098 139.061 103.707 1.00 44.34 C
ATOM 14 N9 G A 519 20.054 139.911 103.144 1.00 43.58 N
ATOM 15 C8 G A 519 18.705 139.647 103.086 1.00 43.99 C
ATOM 16 N7 G A 519 18.016 140.618 102.548 1.00 44.74 N
ATOM 17 C5 G A 519 18.966 141.576 102.224 1.00 43.39 C
ATOM 18 C6 G A 519 18.817 142.845 101.611 1.00 43.43 C
ATOM 19 O6 G A 519 17.779 143.392 101.219 1.00 44.78 O
ATOM 20 N1 G A 519 20.041 143.491 101.464 1.00 41.85 N
ATOM 21 C2 G A 519 21.253 142.978 101.844 1.00 42.83 C
ATOM 22 N2 G A 519 22.326 143.749 101.598 1.00 42.59 N
ATOM 23 N3 G A 519 21.407 141.794 102.418 1.00 43.27 N
ATOM 24 C4 G A 519 20.230 141.153 102.577 1.00 43.42 C
ATOM 25 P A A 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 26 OP1 A A 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 27 OP2 A A 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 28 O5' A A 520 22.144 140.131 108.519 1.00 43.09 O
TER
ATOM 1 O3' G B 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 2 P A B 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 3 OP1 A B 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 4 OP2 A B 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 5 O5' A B 520 22.144 140.131 108.519 1.00 43.09 O
ATOM 6 C5' A B 520 23.316 139.325 108.763 1.00 40.52 C
ATOM 7 C4' A B 520 24.452 140.204 109.244 1.00 40.56 C
ATOM 8 O4' A B 520 24.646 141.279 108.289 1.00 41.35 O
ATOM 9 C3' A B 520 24.200 140.938 110.556 1.00 40.11 C
ATOM 10 O3' A B 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 11 C2' A B 520 25.152 142.127 110.465 1.00 40.40 C
ATOM 12 O2' A B 520 26.466 141.791 110.863 1.00 41.50 O
ATOM 13 C1' A B 520 25.150 142.419 108.963 1.00 39.85 C
ATOM 14 N9 A B 520 24.374 143.584 108.554 1.00 39.18 N
ATOM 15 C8 A B 520 23.066 143.628 108.141 1.00 39.69 C
ATOM 16 N7 A B 520 22.660 144.829 107.804 1.00 40.18 N
ATOM 17 C5 A B 520 23.775 145.629 108.011 1.00 40.40 C
ATOM 18 C6 A B 520 24.003 147.001 107.820 1.00 40.17 C
ATOM 19 N6 A B 520 23.086 147.845 107.344 1.00 42.01 N
ATOM 20 N1 A B 520 25.225 147.484 108.130 1.00 38.63 N
ATOM 21 C2 A B 520 26.149 146.639 108.593 1.00 37.93 C
ATOM 22 N3 A B 520 26.060 145.331 108.806 1.00 39.73 N
ATOM 23 C4 A B 520 24.833 144.879 108.489 1.00 39.95 C
ATOM 24 P U B 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 25 OP1 U B 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 26 OP2 U B 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 27 O5' U B 521 24.163 138.194 113.171 1.00 40.72 O
TER
Atoms:
OP1: (16.560,135.400,106.038)
OP2: (15.739,137.225,104.425)
C3': (20.481,138.530,105.919)
C1': (21.098,139.061,103.707)
C5': (19.373,136.304,105.242)
O6: (17.779,143.392,101.219)
O4': (20.628,137.718,103.727)
C8: (18.705,139.647,103.086)
C2: (21.253,142.978,101.844)
C6: (18.817,142.845,101.611)
C5: (18.966,141.576,102.224)
C4: (20.230,141.153,102.577)
P: (16.756,136.216,104.809)
C4': (20.548,137.247,105.102)
C2': (21.425,139.447,105.150)
O2': (22.791,139.175,105.407)
N1: (20.041,143.491,101.464)
N2: (22.326,143.749,101.598)
N3: (21.407,141.794,102.418)
N7: (18.016,140.618,102.548)
N9: (20.054,139.911,103.144)
O5': (18.145,136.993,104.923)
O3': (20.908,138.324,107.260)
OP2: (15.739,137.225,104.425)
C3': (20.481,138.530,105.919)
C1': (21.098,139.061,103.707)
C5': (19.373,136.304,105.242)
O6: (17.779,143.392,101.219)
O4': (20.628,137.718,103.727)
C8: (18.705,139.647,103.086)
C2: (21.253,142.978,101.844)
C6: (18.817,142.845,101.611)
C5: (18.966,141.576,102.224)
C4: (20.230,141.153,102.577)
P: (16.756,136.216,104.809)
C4': (20.548,137.247,105.102)
C2': (21.425,139.447,105.150)
O2': (22.791,139.175,105.407)
N1: (20.041,143.491,101.464)
N2: (22.326,143.749,101.598)
N3: (21.407,141.794,102.418)
N7: (18.016,140.618,102.548)
N9: (20.054,139.911,103.144)
O5': (18.145,136.993,104.923)
O3': (20.908,138.324,107.260)
OP1: (20.331,138.795,109.629)
OP2: (19.801,140.533,107.814)
C3': (24.200,140.938,110.556)
C1': (25.150,142.419,108.963)
C5': (23.316,139.325,108.763)
O4': (24.646,141.279,108.289)
C8: (23.066,143.628,108.141)
O2': (26.466,141.791,110.863)
C6: (24.003,147.001,107.820)
C5: (23.775,145.629,108.011)
C4: (24.833,144.879,108.489)
P: (20.697,139.483,108.360)
C4': (24.452,140.204,109.244)
C2': (25.152,142.127,110.465)
C2: (26.149,146.639,108.593)
N1: (25.225,147.484,108.130)
N3: (26.060,145.331,108.806)
N6: (23.086,147.845,107.344)
N7: (22.660,144.829,107.804)
N9: (24.374,143.584,108.554)
O5': (22.144,140.131,108.519)
O3': (24.602,140.118,111.643)
OP2: (19.801,140.533,107.814)
C3': (24.200,140.938,110.556)
C1': (25.150,142.419,108.963)
C5': (23.316,139.325,108.763)
O4': (24.646,141.279,108.289)
C8: (23.066,143.628,108.141)
O2': (26.466,141.791,110.863)
C6: (24.003,147.001,107.820)
C5: (23.775,145.629,108.011)
C4: (24.833,144.879,108.489)
P: (20.697,139.483,108.360)
C4': (24.452,140.204,109.244)
C2': (25.152,142.127,110.465)
C2: (26.149,146.639,108.593)
N1: (25.225,147.484,108.130)
N3: (26.060,145.331,108.806)
N6: (23.086,147.845,107.344)
N7: (22.660,144.829,107.804)
N9: (24.374,143.584,108.554)
O5': (22.144,140.131,108.519)
O3': (24.602,140.118,111.643)
Image (generated by PyMOL):