ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0519:0520

Extra

PDB:
ATOM 1 O3' C A 518 17.025 135.275 103.507 1.00 41.74 O
ATOM 2 P G A 519 16.819 136.359 104.679 1.00 45.01 P
ATOM 3 OP1 G A 519 16.691 135.595 105.950 1.00 45.45 O
ATOM 4 OP2 G A 519 15.763 137.329 104.289 1.00 43.84 O
ATOM 5 O5' G A 519 18.195 137.159 104.734 1.00 47.01 O
ATOM 6 C5' G A 519 19.426 136.490 105.079 1.00 46.18 C
ATOM 7 C4' G A 519 20.594 137.432 104.924 1.00 44.72 C
ATOM 8 O4' G A 519 20.654 137.897 103.550 1.00 45.05 O
ATOM 9 C3' G A 519 20.527 138.716 105.733 1.00 43.88 C
ATOM 10 O3' G A 519 20.957 138.515 107.071 1.00 42.46 O
ATOM 11 C2' G A 519 21.473 139.621 104.959 1.00 44.77 C
ATOM 12 O2' G A 519 22.833 139.300 105.200 1.00 45.17 O
ATOM 13 C1' G A 519 21.121 139.239 103.521 1.00 44.71 C
ATOM 14 N9 G A 519 20.070 140.080 102.957 1.00 43.97 N
ATOM 15 C8 G A 519 18.725 139.798 102.881 1.00 44.82 C
ATOM 16 N7 G A 519 18.032 140.750 102.314 1.00 44.90 N
ATOM 17 C5 G A 519 18.978 141.716 101.995 1.00 44.47 C
ATOM 18 C6 G A 519 18.827 142.969 101.352 1.00 44.33 C
ATOM 19 O6 G A 519 17.798 143.481 100.896 1.00 46.77 O
ATOM 20 N1 G A 519 20.041 143.638 101.243 1.00 43.32 N
ATOM 21 C2 G A 519 21.252 143.149 101.666 1.00 44.08 C
ATOM 22 N2 G A 519 22.324 143.936 101.444 1.00 43.83 N
ATOM 23 N3 G A 519 21.408 141.974 102.256 1.00 44.09 N
ATOM 24 C4 G A 519 20.238 141.319 102.391 1.00 43.97 C
ATOM 25 P A A 520 20.790 139.698 108.152 1.00 41.22 P
ATOM 26 OP1 A A 520 20.442 139.027 109.441 1.00 43.20 O
ATOM 27 OP2 A A 520 19.902 140.764 107.620 1.00 39.79 O
ATOM 28 O5' A A 520 22.253 140.320 108.254 1.00 40.69 O
TER

ATOM 1 O3' G B 519 20.957 138.515 107.071 1.00 42.46 O
ATOM 2 P A B 520 20.790 139.698 108.152 1.00 41.22 P
ATOM 3 OP1 A B 520 20.442 139.027 109.441 1.00 43.20 O
ATOM 4 OP2 A B 520 19.902 140.764 107.620 1.00 39.79 O
ATOM 5 O5' A B 520 22.253 140.320 108.254 1.00 40.69 O
ATOM 6 C5' A B 520 23.402 139.499 108.530 1.00 36.49 C
ATOM 7 C4' A B 520 24.528 140.358 109.054 1.00 37.18 C
ATOM 8 O4' A B 520 24.764 141.440 108.118 1.00 37.43 O
ATOM 9 C3' A B 520 24.250 141.069 110.372 1.00 36.31 C
ATOM 10 O3' A B 520 24.652 140.214 111.428 1.00 36.65 O
ATOM 11 C2' A B 520 25.209 142.256 110.319 1.00 36.34 C
ATOM 12 O2' A B 520 26.522 141.900 110.707 1.00 38.15 O
ATOM 13 C1' A B 520 25.236 142.572 108.823 1.00 35.10 C
ATOM 14 N9 A B 520 24.451 143.725 108.415 1.00 33.70 N
ATOM 15 C8 A B 520 23.153 143.747 107.975 1.00 34.19 C
ATOM 16 N7 A B 520 22.736 144.941 107.624 1.00 35.94 N
ATOM 17 C5 A B 520 23.833 145.758 107.856 1.00 34.84 C
ATOM 18 C6 A B 520 24.042 147.128 107.661 1.00 35.32 C
ATOM 19 N6 A B 520 23.123 147.942 107.138 1.00 38.09 N
ATOM 20 N1 A B 520 25.243 147.640 108.012 1.00 32.88 N
ATOM 21 C2 A B 520 26.171 146.813 108.503 1.00 32.17 C
ATOM 22 N3 A B 520 26.100 145.500 108.714 1.00 33.52 N
ATOM 23 C4 A B 520 24.889 145.027 108.365 1.00 34.16 C
ATOM 24 P U B 521 23.596 139.721 112.521 1.00 36.97 P
ATOM 25 OP1 U B 521 22.306 139.404 111.861 1.00 39.82 O
ATOM 26 OP2 U B 521 23.631 140.685 113.650 1.00 35.01 O
ATOM 27 O5' U B 521 24.221 138.340 113.003 1.00 36.07 O
TER

Atoms:
OP1: (16.691,135.595,105.950)
OP2: (15.763,137.329,104.289)
C3': (20.527,138.716,105.733)
C1': (21.121,139.239,103.521)
C5': (19.426,136.490,105.079)
O6: (17.798,143.481,100.896)
O4': (20.654,137.897,103.550)
C8: (18.725,139.798,102.881)
C2: (21.252,143.149,101.666)
C6: (18.827,142.969,101.352)
C5: (18.978,141.716,101.995)
C4: (20.238,141.319,102.391)
P: (16.819,136.359,104.679)
C4': (20.594,137.432,104.924)
C2': (21.473,139.621,104.959)
O2': (22.833,139.300,105.200)
N1: (20.041,143.638,101.243)
N2: (22.324,143.936,101.444)
N3: (21.408,141.974,102.256)
N7: (18.032,140.750,102.314)
N9: (20.070,140.080,102.957)
O5': (18.195,137.159,104.734)
O3': (20.957,138.515,107.071)
OP1: (20.442,139.027,109.441)
OP2: (19.902,140.764,107.620)
C3': (24.250,141.069,110.372)
C1': (25.236,142.572,108.823)
C5': (23.402,139.499,108.530)
O4': (24.764,141.440,108.118)
C8: (23.153,143.747,107.975)
O2': (26.522,141.900,110.707)
C6: (24.042,147.128,107.661)
C5: (23.833,145.758,107.856)
C4: (24.889,145.027,108.365)
P: (20.790,139.698,108.152)
C4': (24.528,140.358,109.054)
C2': (25.209,142.256,110.319)
C2: (26.171,146.813,108.503)
N1: (25.243,147.640,108.012)
N3: (26.100,145.500,108.714)
N6: (23.123,147.942,107.138)
N7: (22.736,144.941,107.624)
N9: (24.451,143.725,108.415)
O5': (22.253,140.320,108.254)
O3': (24.652,140.214,111.428)
Image (generated by PyMOL):
PyMOL image
show in jmol