ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0519:0520

Extra

PDB:
ATOM 1 O3' C A 518 16.810 135.158 103.537 1.00 44.69 O
ATOM 2 P G A 519 16.652 136.217 104.728 1.00 48.42 P
ATOM 3 OP1 G A 519 16.506 135.385 105.949 1.00 49.90 O
ATOM 4 OP2 G A 519 15.611 137.222 104.386 1.00 46.90 O
ATOM 5 O5' G A 519 18.045 136.991 104.788 1.00 49.67 O
ATOM 6 C5' G A 519 19.269 136.316 105.161 1.00 49.56 C
ATOM 7 C4' G A 519 20.450 137.249 105.001 1.00 49.26 C
ATOM 8 O4' G A 519 20.521 137.698 103.621 1.00 48.22 O
ATOM 9 C3' G A 519 20.395 138.542 105.801 1.00 48.80 C
ATOM 10 O3' G A 519 20.853 138.353 107.130 1.00 49.77 O
ATOM 11 C2' G A 519 21.325 139.450 105.008 1.00 49.13 C
ATOM 12 O2' G A 519 22.697 139.196 105.244 1.00 49.02 O
ATOM 13 C1' G A 519 20.986 139.038 103.576 1.00 47.79 C
ATOM 14 N9 G A 519 19.945 139.880 102.995 1.00 46.03 N
ATOM 15 C8 G A 519 18.602 139.606 102.904 1.00 46.64 C
ATOM 16 N7 G A 519 17.919 140.573 102.352 1.00 47.06 N
ATOM 17 C5 G A 519 18.870 141.539 102.053 1.00 46.11 C
ATOM 18 C6 G A 519 18.729 142.809 101.437 1.00 46.34 C
ATOM 19 O6 G A 519 17.702 143.353 101.014 1.00 48.31 O
ATOM 20 N1 G A 519 19.951 143.461 101.326 1.00 46.40 N
ATOM 21 C2 G A 519 21.155 142.955 101.737 1.00 46.32 C
ATOM 22 N2 G A 519 22.229 143.732 101.520 1.00 45.22 N
ATOM 23 N3 G A 519 21.301 141.772 102.314 1.00 46.61 N
ATOM 24 C4 G A 519 20.125 141.124 102.440 1.00 46.46 C
ATOM 25 P A A 520 20.573 139.479 108.249 1.00 49.28 P
ATOM 26 OP1 A A 520 20.141 138.740 109.462 1.00 51.08 O
ATOM 27 OP2 A A 520 19.708 140.546 107.704 1.00 49.05 O
ATOM 28 O5' A A 520 22.007 140.118 108.510 1.00 48.56 O
TER

ATOM 1 O3' G B 519 20.853 138.353 107.130 1.00 49.77 O
ATOM 2 P A B 520 20.573 139.479 108.249 1.00 49.28 P
ATOM 3 OP1 A B 520 20.141 138.740 109.462 1.00 51.08 O
ATOM 4 OP2 A B 520 19.708 140.546 107.704 1.00 49.05 O
ATOM 5 O5' A B 520 22.007 140.118 108.510 1.00 48.56 O
ATOM 6 C5' A B 520 23.181 139.294 108.664 1.00 44.77 C
ATOM 7 C4' A B 520 24.341 140.137 109.138 1.00 44.46 C
ATOM 8 O4' A B 520 24.544 141.215 108.193 1.00 42.77 O
ATOM 9 C3' A B 520 24.129 140.849 110.470 1.00 43.59 C
ATOM 10 O3' A B 520 24.542 140.005 111.536 1.00 44.27 O
ATOM 11 C2' A B 520 25.086 142.033 110.378 1.00 44.36 C
ATOM 12 O2' A B 520 26.405 141.705 110.770 1.00 44.77 O
ATOM 13 C1' A B 520 25.071 142.338 108.876 1.00 43.14 C
ATOM 14 N9 A B 520 24.318 143.520 108.483 1.00 41.09 N
ATOM 15 C8 A B 520 23.004 143.599 108.110 1.00 41.90 C
ATOM 16 N7 A B 520 22.624 144.805 107.771 1.00 43.24 N
ATOM 17 C5 A B 520 23.765 145.573 107.936 1.00 43.58 C
ATOM 18 C6 A B 520 24.027 146.935 107.722 1.00 43.83 C
ATOM 19 N6 A B 520 23.125 147.795 107.249 1.00 44.64 N
ATOM 20 N1 A B 520 25.267 147.386 108.001 1.00 42.34 N
ATOM 21 C2 A B 520 26.179 146.518 108.447 1.00 41.81 C
ATOM 22 N3 A B 520 26.059 145.213 108.672 1.00 42.87 N
ATOM 23 C4 A B 520 24.812 144.797 108.392 1.00 42.78 C
ATOM 24 P U B 521 23.473 139.437 112.583 1.00 41.27 P
ATOM 25 OP1 U B 521 22.263 139.003 111.868 1.00 45.21 O
ATOM 26 OP2 U B 521 23.364 140.421 113.675 1.00 43.72 O
ATOM 27 O5' U B 521 24.173 138.116 113.128 1.00 44.59 O
TER

Atoms:
OP1: (16.506,135.385,105.949)
OP2: (15.611,137.222,104.386)
C3': (20.395,138.542,105.801)
C1': (20.986,139.038,103.576)
C5': (19.269,136.316,105.161)
O6: (17.702,143.353,101.014)
O4': (20.521,137.698,103.621)
C8: (18.602,139.606,102.904)
C2: (21.155,142.955,101.737)
C6: (18.729,142.809,101.437)
C5: (18.870,141.539,102.053)
C4: (20.125,141.124,102.440)
P: (16.652,136.217,104.728)
C4': (20.450,137.249,105.001)
C2': (21.325,139.450,105.008)
O2': (22.697,139.196,105.244)
N1: (19.951,143.461,101.326)
N2: (22.229,143.732,101.520)
N3: (21.301,141.772,102.314)
N7: (17.919,140.573,102.352)
N9: (19.945,139.880,102.995)
O5': (18.045,136.991,104.788)
O3': (20.853,138.353,107.130)
OP1: (20.141,138.740,109.462)
OP2: (19.708,140.546,107.704)
C3': (24.129,140.849,110.470)
C1': (25.071,142.338,108.876)
C5': (23.181,139.294,108.664)
O4': (24.544,141.215,108.193)
C8: (23.004,143.599,108.110)
O2': (26.405,141.705,110.770)
C6: (24.027,146.935,107.722)
C5: (23.765,145.573,107.936)
C4: (24.812,144.797,108.392)
P: (20.573,139.479,108.249)
C4': (24.341,140.137,109.138)
C2': (25.086,142.033,110.378)
C2: (26.179,146.518,108.447)
N1: (25.267,147.386,108.001)
N3: (26.059,145.213,108.672)
N6: (23.125,147.795,107.249)
N7: (22.624,144.805,107.771)
N9: (24.318,143.520,108.483)
O5': (22.007,140.118,108.510)
O3': (24.542,140.005,111.536)
Image (generated by PyMOL):
PyMOL image
show in jmol